cpnDB: A Chaperonin Database
September 23, 2014 - LOGGED IN AS: guest - SEARCHABLE RECORDS: 19685 - LAST ADDITION: 2014-09-21

RECORD DETAILS

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Chaperonin ID: b6991
Chaperonin Group: II
Deposit Date: 2004-11-01
Type: ref
Type strain?: no
Genus: Giardia
Species: lamblia
Strain: WB C6
Lineage: root; cellular organisms; Eukaryota; Fornicata; Diplomonadida; Hexamitidae; Giardiinae; Giardia
Original ID: ATCC 50803
CUTC ID: -
Nucleotide Genbank Accession: AACB02000006
Nucleotide Genbank gi: 157436709
Peptide Genbank Accession: EDO80995
Peptide Genbank gi: 157436782
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Synonym Giardia intestinalis ATCC50803. Gamma subunit. From whole genome shotgun sequence.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGCAGCCCCAAGTCTATGTCCTGAGCCAAGGCACCGAGAGCGAGCGCCGAGAAATGGCC
CGCATGAACAACATCAAGGCAAGTAAGACAGTCGCAGACGTCATCAGGACAACGATGGGC
CCACGCTCCATGCTCAAGATGATCCTGGACTCAATGGGGAGCGTGGTCATGACAAACGAC
GGGAACGCCATCCTGCGCGAGCTCGACGTGGCACACCCCGCAGCCAAGGCCATGCTGGAG
GTTTCACGGGCCCAGGAGGAGCAAGTCGGAGACGGCACCACAAGCGTTGTCATCCTGGCA
GGGGAGGTGATCGCCATGGCAGAGCCCCTTCTCAAGTGTGGGATACATCCTATTCTCATT
ACGCAGGGATACCAGAAAGCCTTGGACTTTCTTTTGAGTGAGGCAGAAAGATCTTCATTT
GAAATAAATATAAAGGGCATAGAGATCCTGGGTCTGAAGTCTGAGGCGGCAGGCCCTATT
ATGACAGTTTTAAAGAACTCGCTATCCACGAAGTTTGTCAGTAGATGGATGGATCTCATG
TGCAACCTTGCGCTCGAGGCGGTCAGCATAGTCGCTAGAGGACGTGGAGCGGAGGTGCGC
AAGGGTCTAGTGGGTGTCACTAAGGATGCGCGTTCAAAAGGGGATGAAGCAGAGCTTGGT
GCTTCAGTTGACATTGATATTAAGAGGTTTTGCCGCATAGAGAAGATCCCTGGTGCGACT
GTGGAGGACTGCTGCGTCATCGATGGCGTAGTGCTTAATAAGGATGTCATTCACCCCGAT
ATGAGGAAGTACATCAAGAATCCCCGCATACTTCTTCTGGATTGCCCTCTAGAGTACAAG
AAGGCCCAATCAATGATGAACGTAGAGCTGTTCCAAGGGAAGTCTGATCTAGGAGACATA
CTCAAGGTCGAAGAAGACTACATTAGGACCCACGTGGAGAAGATCCTCAGCTTCAAGCCC
GACCTGGTCATCACCGAGAAGGGTGTGGCGGATCAGGCGACTCATATGTTTGTCCAGCAC
GGCGTGACAGTCCTCAGGCGCGTCAGGAAGACAGACAACGTGCGCCTTGCGGCAGTTTCC
GGTGCCACCATTGTCAGTCGCGTGGAGGAGCTTCAAGAAAGTGATGTGGGGACATACGCA
GGCCTCTATGAGCTCCAGAAGATCGGTGACGAGTTCTTTTCCTTCATCCACCAATCTGGG
GGTAAGGCCAGTGCCTGTACCATTGTGCTTCGAGGCGCCTCCAAGAGCACCCTGCTGGAG
ATAGAGCGGAACATTCAGGACGCCATGCACGTGTGCAGGAATATTATCCTTGACCCGCGC
CTGGTCATTGGCGGAGGCTGTTTTGAGGCTCACTTGTCGACGGCACTCTCTCAGTATGCA
GACACCCTTGTCGGAAAGCCTCAGCTTGTCATTAAGGCAGTCGCCAAATCCCTGGAGGTG
ATCCCACGGACGCTGCTGCAGAACTGCGGTGGGAATATAATAAGGACCATCACCGAGCTC
AAGGCTGCCCACACCAGTGACCCGAACTGTCAGCTGGGTGTCGATGGGGTCACAGGGCTC
CTCGTCAACTGCAAGGAGCAGGGCATCTGGGACCCACTGAGCACAAAGCTGCAGGTCCTC
AAGGCCGCTATAGAAAATGCTTGTATGATCCTGCGCGTTGATGACATCTTCAGTTGCGAT
GGAAAAAGCGTGTGA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MQPQVYVLSQGTESERREMARMNNIKASKTVADVIRTTMGPRSMLKMILDSMGSVVMTND
GNAILRELDVAHPAAKAMLEVSRAQEEQVGDGTTSVVILAGEVIAMAEPLLKCGIHPILI
TQGYQKALDFLLSEAERSSFEINIKGIEILGLKSEAAGPIMTVLKNSLSTKFVSRWMDLM
CNLALEAVSIVARGRGAEVRKGLVGVTKDARSKGDEAELGASVDIDIKRFCRIEKIPGAT
VEDCCVIDGVVLNKDVIHPDMRKYIKNPRILLLDCPLEYKKAQSMMNVELFQGKSDLGDI
LKVEEDYIRTHVEKILSFKPDLVITEKGVADQATHMFVQHGVTVLRRVRKTDNVRLAAVS
GATIVSRVEELQESDVGTYAGLYELQKIGDEFFSFIHQSGGKASACTIVLRGASKSTLLE
IERNIQDAMHVCRNIILDPRLVIGGGCFEAHLSTALSQYADTLVGKPQLVIKAVAKSLEV
IPRTLLQNCGGNIIRTITELKAAHTSDPNCQLGVDGVTGLLVNCKEQGIWDPLSTKLQVL
KAAIENACMILRVDDIFSCDGKSV
Nucleotide UT Sequence: -
Peptide UT Sequence: -
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