cpnDB: A Chaperonin Database
May 18, 2013 - LOGGED IN AS: guest - SEARCHABLE RECORDS: 17001 - LAST ADDITION: 2013-03-17

RECORD DETAILS

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Chaperonin ID: b12615
Chaperonin Group: I
Deposit Date: 2008-10-28
Type: cli
Type strain?: no
Genus: Escherichia
Species: coli
Strain: SE11
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_011415
Nucleotide Genbank gi: 209917191
Peptide Genbank Accession: YP_002295717
Peptide Genbank gi: 209921633
Best FASTA Match: b18824 Escherichia coli H120 (see fasta results)
Date of FASTA search: 2013-05-13
FASTA identity %: 100.000
Best BLASTP Match: b23810 Escherichia coli O157:H7 str. EC4191 (see blastp results)
Date of BLASTP search: 2013-05-13
BLASTP identity %: 100.000
Source: Genbank
Notes: -
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGTGTGAAAATGCTGCGCGGCGTA
AACGTACTGGCAGATGCAGTGAAAGTTACCCTCGGTCCGAAAGGCCGTAACGTAGTTCTG
GATAAATCTTTCGGTGCACCGACCATCACCAAAGATGGTGTTTCCGTTGCTCGTGAAATC
GAACTGGAAGACAAGTTCGAAAATATGGGTGCGCAGATGGTGAAAGAAGTTGCCTCTAAA
GCGAACGACGCTGCAGGCGACGGTACCACCACTGCAACTGTACTGGCTCAGGCTATCATC
ACTGAGGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTATC
GACAAAGCCGTTACCGCTGCAGTTGAAGAACTGAAAGCGCTGTCCGTACCGTGCTCTGAC
TCTAAAGCGATTGCTCAGGTTGGTACCATCTCCGCTAACTCCGACGAAACCGTAGGTAAA
CTGATCGCTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGT
ACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTG
TCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATC
CTGCTGGCTGACAAGAAAATCTCTAACATCCGCGAAATGCTGCCGGTTCTGGAAGCTGTT
GCCAAAGCAGGCAAACCGCTGCTGATCATCGCTGAAGATGTTGAAGGCGAAGCTCTGGCA
ACTCTGGTTGTTAACACCATGCGTGGCATCGTGAAAGTTGCTGCGGTTAAAGCTCCGGGC
TTCGGCGATCGTCGTAAAGCTATGCTGCAGGATATCGCAACCCTGACTGGCGGTACCGTA
ATCTCTGAAGAGATCGGTATGGAGCTGGAAAAAGCAACCCTGGAAGACCTGGGTCAGGCT
AAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCT
GCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAC
GACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTTGCAGTTATCAAA
GTAGGTGCTGCTACCGAAGTTGAAATGAAAGAGAAAAAAGCACGCGTTGAAGACGCCCTG
CACGCGACCCGTGCTGCGGTAGAAGAAGGCGTGGTTGCTGGTGGTGGTGTTGCGCTGATC
CGCGTAGCGTCTAAACTGGCTGACCTGCGTGGTCAGAACGAAGACCAGAACGTGGGTATC
AAAGTTGCACTGCGTGCAATGGAAGCTCCGCTGCGTCAGATCGTCCTGAACTGCGGCGAA
GAACCGTCTGTTGTTGCTAACACCGTTAAAGGCGGCGACGGCAACTACGGTTACAACGCA
GCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGACCCAACCAAAGTAACC
CGTTCTGCTCTGCAGTACGCGGCTTCTGTGGCTGGCCTGATGATCACCACCGAGTGCATG
GTTACCGACCTGCCGAAAAATGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGC
ATGGGTGGCATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG
MGGMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCAACTGTACTGGCTCAGGCTATCATCACTGAGGGTCTGAAAGCTGTTGCTGCGGGCATG
AACCCGATGGACCTGAAACGTGGTATCGACAAAGCCGTTACCGCTGCAGTTGAAGAACTG
AAAGCGCTGTCCGTACCGTGCTCTGACTCTAAAGCGATTGCTCAGGTTGGTACCATCTCC
GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCTGAAGCGATGGACAAAGTCGGTAAA
GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
GGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
GCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAAGAAAATCTCTAACATCCGC
GAAATGCTGCCGGTTCTGGAAGCTGTTGCCAAAGCAGGCAAACCGCTGCTGATCATCGCT
GAAGATGTTGAAGGCGAAGCTCTGGCAACTCTGGTTGTTAACACCATGCGTGGCATCGTG
AAAGTTGCTGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTIS
ANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETG
AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV
KVAAV
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