|
Chaperonin ID:
|
b12849 |
|
Chaperonin Group:
|
I |
|
Deposit Date:
|
2009-01-18 |
|
Type:
|
fie |
|
Type strain?:
|
no |
|
Genus:
|
Unknown |
|
Species:
|
sp. |
|
Strain:
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gamma proteobacterium NOR51-B |
|
Lineage:
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root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; unclassified Gammaproteobacteria |
|
Original ID:
|
- |
|
CUTC ID:
|
- |
|
Nucleotide Genbank Accession:
|
DS999411 |
|
Nucleotide Genbank gi:
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219677714
|
|
Peptide Genbank Accession:
|
EED36912 |
|
Peptide Genbank gi:
|
219680563
|
|
Best FASTA Match:
|
b9336 Congregibacter litoralis KT71 (see fasta results)
|
|
Date of FASTA search:
|
2013-05-13 |
|
FASTA identity %:
|
79.700 |
|
Best BLASTP Match:
|
b9336 Congregibacter litoralis KT71 (see blastp results)
|
|
Date of BLASTP search:
|
2013-05-13 |
|
BLASTP identity %:
|
88.649 |
|
Source:
|
Genbank |
|
Notes:
|
- |
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
|
ATGGCAGCTAAAGACGTACATTTTGGAGACAAGGCGCGCCAGCAGATGCTGGTAGGCGTG
AATGTTCTCGCTGACGCCGTAAAGGCGACCCTCGGCCCCAAGGGTCGTAACGTAATCCTC
GAGAAGTCCTTCGGCGCGCCCACCGTGACCAAGGATGGTGTTTCCGTAGCCAAGGAAATC
GAACTCGCTGACCGCTTTGAGAACATGGGCGCTCAGATGGTCAAAGAAGTGGCTTCACAG
GCGTCTGACGCCGCTGGTGACGGCACCACGACAGCAACCGTGTTGGCCCAGTCGATTGTC
AACGAAGGGCTTAAGTCAGTGGCAGCGGGTATGAACCCGATGGATCTGAAGCGCGGTATC
GACAAGGCAGTGACAGCGGCGGTTGCCGCAGTGCAGGCCATGGCCACACCGTGTGAAGAC
AACAAAGCCATCGCCCAGGTAGGTACCATTTCTGCCAACAGCGACGTGTCCGTCGGTGAG
ATTATTGCTGACGCCATGGAAAAAGTAGGCAAGGAAGGCGTGATCACGGTTGAAGAAGGT
TCGGGTCTTGAGAACGAACTCGACGTCGTAGAGGGTATGCAGTTTGACCGCGGTTACCTC
TCGCCTTATTTCATCAACAACCAGGAGAGCATGCAGTGCGAACTTGAGGACCCATTCATC
TTGCTGGTGGATAAGAAGGTCTCGAATATTCGTGAGCTGCTTCCCCTGCTTGAGCAGGTA
GCCAAGGCGTCCAAGCCGCTGGTTATTGTCGCTGAAGATATCGAAGGTGAGGCCCTTGCC
ACGCTCGTTGTCAACAACATGCGCGGTATTGTTAAAGTCTCAGCCTGTAAGGCTCCGGGC
TTCGGCGACCGTCGTAAGGCCATGCTTCAGGACATCGCCATTCTCACCGGCGGCACCGTG
ATCTCCGAGGAAGTCGGTATGGACCTCGAGTCCACGACCCTTGAGCACCTCGGTAGTGCC
AAGCGTGTGACCATGGATAAAGACAACACGATCATTGTTGACGGTGCCGGTGATGCCGCT
GCCATCAGCAGCCGTGTTAACGAAATCCGTGTCCAGATCGAAAACACCTCTTCGGACTAC
GATCGCGAGAAGATGCAGGAACGTGTCGCCAAGCTCGCCGGCGGTGTTGCGGTGATCAAG
GTTGGCGCTGCTACTGAAATCGAGATGAAAGAGAAAAAGGCTCGGGTTGAAGACGCGCTG
CACGCGACACGCGCCGCTGTGGAAGAGGGCGTCGTCGCCGGTGGTGGTGTCGCTCTTATT
CGCGCTATCTCAGCGATCGCCGAGTTGACGGGTGACAACGAAGACCAGAACCACGGCATC
GCCGCTGCGCTTCGTGCCATGGAAGGTCCTCTGCGCCAGATCGTCGAAAACGCCGGCGAT
GAAGCTTCCGTGGTACTCGATAAGGTACGTCAGGGCGAAGGTAACTTCGGTTACAACGCC
GCGACCGGCGAATACGGCGACATGCTCGAGATGGGTATTCTCGACCCCGCCAAGGTGACC
CGTACTGCACTGCAGGCCGCGGGTTCGGTTGCCGCGCTGATGATCACCACCGAGGTGATG
ATCGCTGAGGCGCCCAAGGACGACGCAGCCCCCGCAATGCCCGATATGGGCGGCATGGGC
GGCATGGGCGGCATGATGTAA |
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
|
MAAKDVHFGDKARQQMLVGVNVLADAVKATLGPKGRNVILEKSFGAPTVTKDGVSVAKEI
ELADRFENMGAQMVKEVASQASDAAGDGTTTATVLAQSIVNEGLKSVAAGMNPMDLKRGI
DKAVTAAVAAVQAMATPCEDNKAIAQVGTISANSDVSVGEIIADAMEKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQESMQCELEDPFILLVDKKVSNIRELLPLLEQV
AKASKPLVIVAEDIEGEALATLVVNNMRGIVKVSACKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGMDLESTTLEHLGSAKRVTMDKDNTIIVDGAGDAAAISSRVNEIRVQIENTSSDY
DREKMQERVAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAISAIAELTGDNEDQNHGIAAALRAMEGPLRQIVENAGDEASVVLDKVRQGEGNFGYNA
ATGEYGDMLEMGILDPAKVTRTALQAAGSVAALMITTEVMIAEAPKDDAAPAMPDMGGMG
GMGGMM |
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
|
GCAACCGTGTTGGCCCAGTCGATTGTCAACGAAGGGCTTAAGTCAGTGGCAGCGGGTATG
AACCCGATGGATCTGAAGCGCGGTATCGACAAGGCAGTGACAGCGGCGGTTGCCGCAGTG
CAGGCCATGGCCACACCGTGTGAAGACAACAAAGCCATCGCCCAGGTAGGTACCATTTCT
GCCAACAGCGACGTGTCCGTCGGTGAGATTATTGCTGACGCCATGGAAAAAGTAGGCAAG
GAAGGCGTGATCACGGTTGAAGAAGGTTCGGGTCTTGAGAACGAACTCGACGTCGTAGAG
GGTATGCAGTTTGACCGCGGTTACCTCTCGCCTTATTTCATCAACAACCAGGAGAGCATG
CAGTGCGAACTTGAGGACCCATTCATCTTGCTGGTGGATAAGAAGGTCTCGAATATTCGT
GAGCTGCTTCCCCTGCTTGAGCAGGTAGCCAAGGCGTCCAAGCCGCTGGTTATTGTCGCT
GAAGATATCGAAGGTGAGGCCCTTGCCACGCTCGTTGTCAACAACATGCGCGGTATTGTT
AAAGTCTCAGCCTGT |
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
|
ATVLAQSIVNEGLKSVAAGMNPMDLKRGIDKAVTAAVAAVQAMATPCEDNKAIAQVGTIS
ANSDVSVGEIIADAMEKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQESM
QCELEDPFILLVDKKVSNIRELLPLLEQVAKASKPLVIVAEDIEGEALATLVVNNMRGIV
KVSAC |