Chaperonin ID: b10024
Chaperonin Group: I
Deposit Date: 2007-01-18
Type: ref
Type strain?: no
Genus: Rattus
Species: norvegicus
Strain: strain W
Lineage: root; cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NM_022229
Peptide Genbank Accession: NP_071565
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Genome RefSeq for rat type I chaperonin.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGCTTCGACTACCCACAGTCCTTCGCCAGATGAGACCAGTGTCTCGGGCACTGGCTCCT
CATCTCACTCGGGCCTATGCCAAAGATGTAAAATTTGGTGCGGATGCTCGAGCCTTAATG
CTTCAAGGTGTAGACCTTTTAGCCGATGCTGTAGCTGTTACAATGGGGCCAAAGGGAAGA
ACAGTGATTATTGAACAGAGTTGGGGAAGTCCCAAAGTAACAAAAGATGGGGTCACTGTT
GCAAAGTCAATTGATTTAAAGGATAAATACAAAAATATCGGAGCTAAGCTTGTTCAGGAT
GTTGCCAATAACACAAATGAAGAGGCTGGGGATGGCACCACCACTGCCACTGTTCTGGCA
CGGTCTATTGCCAAGGAGGGCTTTGAGAAGATCAGCAAAGGGGCTAATCCAGTGGAAATC
CGGAGAGGTGTGATGTTGGCTGTTGATGCTGTAATTGCTGAACTTAAGAAACAATCTAAA
CCTGTGACAACCCCTGAAGAAATTGCTCAGGTTGCTACAATTTCTGCAAACGGAGACAAA
GACATTGGGAACATCATTTCTGATGCAATGAAGAAGGTTGGAAGAAAGGGTGTCATCACA
GTGAAGGATGGAAAAACCCTGAATGATGAGCTAGAAATTATTGAAGGCATGAAGTTTGAT
AGAGGATATATTTCCCCATATTTTATTAACACATCAAAAGGTCAAAAATGTGAATTCCAA
GATGCCTATGTTTTGTTGAGTGAAAAGAAAATTTCTAGTGTTCAGTCCATTGTACCTGCT
CTTGAAATTGCCAATGCTCACCGGAAGCCCTTGGTCATAATTGCTGAAGATGTTGATGGA
GAAGCTCTTAGCACACTGGTTTTGAACAGGCTAAAAGTTGGTCTTCAGGTTGTAGCAGTC
AAAGCTCCAGGGTTTGGGGACAACAGGAAGAACCAGCTTAAAGATATGGCTATCGCTACT
GGTGGTGCGGTGTTTGGAGAAGAGGGTTTGAATCTAAATCTTGAAGATGTTCAAGCTCAT
GATTTAGGGAAAGTTGGAGAGGTCATCGTCACCAAAGATGATGCCATGCTTTTGAAAGGA
AAAGGTGACAAAGCTCACATTGAAAAACGTATTCAAGAAATCACTGAGCAGCTAGACATC
ACCACTAGTGAATATGAGAAGGAAAAGCTGAACGAGCGACTTGCTAAACTCTCAGATGGA
GTAGCCGTGTTGAAGGTTGGAGGGACAAGTGATGTTGAAGTGAATGAGAAGAAAGACAGA
GTTACAGATGCTCTCAATGCTACAAGAGCAGCTGTTGAAGAAGGCATTGTTCTAGGAGGG
GGCTGTGCTCTACTTCGGTGCATCCCAGCCTTGGATTCATTAAAGCCTGCTAATGAAGAT
CAGAAGATAGGTATAGAAATTATTAAAAGAGCACTTAAAATTCCTGCAATGACGATTGCT
AAGAATGCAGGTGTTGAAGGATCTTTGATAGTTGAAAAAATTCTGCAGAGTTCCTCAGAG
GTTGGCTATGATGCCATGCTTGGAGATTTTGTGAACATGGTGGAAAAGGGAATCATTGAT
CCAACAAAGGTTGTAAGAACTGCTTTACTGGATGCTGCTGGGGTGGCCCCCCTGCTAACT
ACAGCCGAAGCTGTAGTGACAGAAATTCCTAAAGAAGAGAAGGACCCTGGAATGGGTGCA
ATGGGTGGAATGGGAGGGGGTATGGGAGGTGGCATGTTCTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MLRLPTVLRQMRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDK
DIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKG
KGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIA
KNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVAPLLT
TAEAVVTEIPKEEKDPGMGAMGGMGGGMGGGMF
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCCACTGTTCTGGCACGGTCTATTGCCAAGGAGGGCTTTGAGAAGATCAGCAAAGGGGCT
AATCCAGTGGAAATCCGGAGAGGTGTGATGTTGGCTGTTGATGCTGTAATTGCTGAACTT
AAGAAACAATCTAAACCTGTGACAACCCCTGAAGAAATTGCTCAGGTTGCTACAATTTCT
GCAAACGGAGACAAAGACATTGGGAACATCATTTCTGATGCAATGAAGAAGGTTGGAAGA
AAGGGTGTCATCACAGTGAAGGATGGAAAAACCCTGAATGATGAGCTAGAAATTATTGAA
GGCATGAAGTTTGATAGAGGATATATTTCCCCATATTTTATTAACACATCAAAAGGTCAA
AAATGTGAATTCCAAGATGCCTATGTTTTGTTGAGTGAAAAGAAAATTTCTAGTGTTCAG
TCCATTGTACCTGCTCTTGAAATTGCCAATGCTCACCGGAAGCCCTTGGTCATAATTGCT
GAAGATGTTGATGGAGAAGCTCTTAGCACACTGGTTTTGAACAGGCTAAAAGTTGGTCTT
CAGGTTGTAGCAGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATIS
ANGDKDIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQ
KCEFQDAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGL
QVVAV