Chaperonin ID: | b12076 |
Chaperonin Group: | I |
Deposit Date: | 2008-05-25 |
Type: | ref |
Type strain?: | no |
Genus: | Heterosigma |
Species: | akashiwo |
Strain: | NIES 293 |
Lineage: | root; cellular organisms; Eukaryota; stramenopiles; Raphidophyceae; Heterosigma |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | EU168190 |
Peptide Genbank Accession: | ABV65929 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | From complete sequence of chloroplast genome. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAAAAATTCTTTATCAGGATGACGCTAGACGGGCATTAGAAAAGGGTATGGGT ATATTAACAGAAGCAGTAGCAGTAACATTAGGCCCAAAAGGTCGAAATGTTGTTATTGAA AATAAATTTGGATCTCCAGAAATTATAAATGATGGGGTTAGTATTGCAAAACAAATTGAA TTAGTTGATAACATTGAAAATACTGGCGTATTATTAATTCGCCAAGCTGCTGCAAAAACA AATGATGTAGCAGGCGATGGAACAACAACTGCAACTGTTTTAGCATATTCAATTGTTAAA CAGGGTATGCGAAATGTTGCTGCAGGAGCAAATCCAATTTTATTAAAACGAGGAATTGAA AAGGCTACTAAATATTTAGTAGAATTAATTGTTAATTTAGCTGAGCCGGTAGAAGATCTC GCTGCAATTGAACAAGTTGCAACAATATCGGCTGGTAATGATTCTGAGCCGGGACAAATG ATTGCTAATGCTCTTGAAAAAGTAGGTAAAGATGGGGTTATTTCATTAGAAGAGGGTAAT TCAACATCAACTATTTTAGAAACAACTGAAGGAATGAGATTAAACAAAGGTTTTATTTCT CCTTATTTTATGACAGACCTTGAAAGAATGGAGACTGTTTATGAAAATCCTTATATTTTA ATTACTGATAAAAAAATAACACTTGTTCAACAAGAACTTATTCCTATTCTTGAACAAGTT GCTAGAACAAAACGTCCATTATTATTAATTGCTCAGGATATTGAAAAAGAAGCACTTGCT ACCTTAATTTTAAATAAATTACGTGGCATTGTTAATGTGGTAGCAATTAGGGCCCCGGGT TTTGGCGAACAAAGAAAACTAATTTTAGAAGACATTGCTATTTTAACCAATGGTAATTTA ATTACAGAAGATGCTGGTAAAACATTTGAAACACTTGAATTAGAAAATTTAGGTCAGGCA AGAAAAATAATTGTTAATAAAGATGCAACTACAATTATTTCAGAAGGAAACTCCCATCAA ATACAACAACGTTGTGAACAGTTACGGAAACAAATTAGCCGAGCAGAAGTTCAATATGAT AAAGAAAAATTACAAAATCGTGTTGCTCGTTTATCTGGGGGTGTAGCTGTAATAAAAGTT GGTGCTGTAACCGAGACAGAAATGAAAGACAAGAAATTAAGATTAGAAGATGCTATTAAT GCTACCCGTGCCGCGGTAGAAGAGGGTATTGTACCGGGCGGGGGAACGGCTTTAGCCCAT TTATCGGAGTCATTAAAAACATGGGTAAAAACAAATTTATTAGAAGATGAGCTTATTGGT GGTATAATAGTTGTTAAATCAATTATTGAACCATTAAAACGAATTGCATATAATTCTGGA AAAAACGGCGTGGTAATTCTAGAAGAAATACAAGGAAAGGATATTTCTTATGGCTATAAT GCAGCAGCTGACAAATTTGGTAATATGTATGAATTTGGAGTAATTGATCCTGCAAAAGTT ACTCGATCTGCAATTCAAAATGCAGCATCAATTGCAAGTATGATTTTAACAACTGAATGT ATTGTTGTAAATCAAAACAATTCTTCAACTTTTAAATAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKKILYQDDARRALEKGMGILTEAVAVTLGPKGRNVVIENKFGSPEIINDGVSIAKQIE LVDNIENTGVLLIRQAAAKTNDVAGDGTTTATVLAYSIVKQGMRNVAAGANPILLKRGIE KATKYLVELIVNLAEPVEDLAAIEQVATISAGNDSEPGQMIANALEKVGKDGVISLEEGN STSTILETTEGMRLNKGFISPYFMTDLERMETVYENPYILITDKKITLVQQELIPILEQV ARTKRPLLLIAQDIEKEALATLILNKLRGIVNVVAIRAPGFGEQRKLILEDIAILTNGNL ITEDAGKTFETLELENLGQARKIIVNKDATTIISEGNSHQIQQRCEQLRKQISRAEVQYD KEKLQNRVARLSGGVAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGTALAH LSESLKTWVKTNLLEDELIGGIIVVKSIIEPLKRIAYNSGKNGVVILEEIQGKDISYGYN AAADKFGNMYEFGVIDPAKVTRSAIQNAASIASMILTTECIVVNQNNSSTFK |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTTTTAGCATATTCAATTGTTAAACAGGGTATGCGAAATGTTGCTGCAGGAGCA AATCCAATTTTATTAAAACGAGGAATTGAAAAGGCTACTAAATATTTAGTAGAATTAATT GTTAATTTAGCTGAGCCGGTAGAAGATCTCGCTGCAATTGAACAAGTTGCAACAATATCG GCTGGTAATGATTCTGAGCCGGGACAAATGATTGCTAATGCTCTTGAAAAAGTAGGTAAA GATGGGGTTATTTCATTAGAAGAGGGTAATTCAACATCAACTATTTTAGAAACAACTGAA GGAATGAGATTAAACAAAGGTTTTATTTCTCCTTATTTTATGACAGACCTTGAAAGAATG GAGACTGTTTATGAAAATCCTTATATTTTAATTACTGATAAAAAAATAACACTTGTTCAA CAAGAACTTATTCCTATTCTTGAACAAGTTGCTAGAACAAAACGTCCATTATTATTAATT GCTCAGGATATTGAAAAAGAAGCACTTGCTACCTTAATTTTAAATAAATTACGTGGCATT GTTAATGTGGTAGCAATT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAYSIVKQGMRNVAAGANPILLKRGIEKATKYLVELIVNLAEPVEDLAAIEQVATIS AGNDSEPGQMIANALEKVGKDGVISLEEGNSTSTILETTEGMRLNKGFISPYFMTDLERM ETVYENPYILITDKKITLVQQELIPILEQVARTKRPLLLIAQDIEKEALATLILNKLRGI VNVVAI |