Chaperonin ID: | b21011 |
Chaperonin Group: | I |
Deposit Date: | 2012-08-25 |
Type: | ref |
Type strain?: | no |
Genus: | Bifidobacterium |
Species: | bifidum |
Strain: | BGN4 |
Lineage: | root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | CP001361 |
Peptide Genbank Accession: | AFL04228 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Human fecal isolate. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGATCATTGCATACGACGAGGAAGCTCGTCAGGGCATGCTTGCGGGTCTCGAC AAGCTCGCCAACACCGTGAAGGTCACTCTGGGCCCGAAGGGCCGCAATGTGGTGCTCGAC AAGTCCTATGGCGCACCGACCATCACCAACGATGGCGTCTCCATCGCCAAGGAAATCGAT CTTGAGGATCCGTACGAGCGCATCGGCGCCGAGCTGGTCAAGGAAGTCGCCAAGAAGACC GACGACGTCGCGGGCGACGGAACCACCACCGCCACCGTGCTGGCCCAGTCCCTCGTGCAC GAAGGCCTGAAGAACGTTGTCGCCGGCTCCAACCCGATCGCGCTGCGTCGCGGCATCGAG AAGGCCACCGACACCATCGTCAAGGAACTGGTCGCCGCCGCCAAGGACGTGGAGACCAAG GACCAGATCGCCGCCACCGCCACGATCTCCGCAGCCGACCCCGAGGTTGGCGAGAAGATC GCCGAGGCTCTGGACAAGGTCGGTCAGGACGGCGTCGTGACCGTCGAGGACAACAACCGC TTCGGCCTTGACCTTGAGTTCACCGAGGGCATGCGTTTCGACAAGGGCTACATCGCCCCG TACTTCGTGACCAACGCGGACGACCAGACCGCGGTTCTTGAGGATCCGTACATCCTCCTG ACCTCCGGCAAGGTTTCCAGCCAGCAGGACGTCGTCCACATCGCCGAGCTCGTCATGAAG TCCGGCAAGCCGCTGCTGATCATCGCCGAGGACGTCGACGGCGAGGCGCTGCCGACCCTC ATCCTGAACAAGATCCGCGGCACCTTCAACTCCTGCGCCGTCAAGGCCCCCGGCTTCGGC GACCGTCGCAAGGCGATGCTGCAGGATATGGCCATCCTGACCGGTGCTCAGGTCGTGTCC GACGAGCTGGGTCTCAAGCTCGACTCCATCGACATGTCCGTGCTCGGCACCGCCAAGAAG GTCATCGTCTCCAAGGACGAGACCACCATCGTTTCCGGCGGCGGCGACAAGGCCGACGTC GAGGCTCGCGTGGCCCAGATTCGCGCCGAGATCGAGAAGACCGACTCCGATTACGACCGT GAGAAGCTGCAGGAGCGTCTCGCCAAGCTGGCCGGCGGCGTCGCCGTCATCAAAGTCGGC GCGGCCACCGAGGTCGAGGCCAAGGAGCGTAAGCACCGCATCGAAGACGCCGTGCGCAAC GCCAAGGCCGCTATCGAAGAGGGCCTGCTGCCCGGCGGTGGCGTGGCGCTCGTCCAGGCT GCCAAGAAGGCCGAGTCCGCAGAAGCCGTCACTTCGCTGACCGGCGAAGAGGCCACCGGT GCCGCCATCGTGTTCCGCGCCATCGAGGCTCCGATCAAGCAGATCGCCGAGAACTCCGGC GTGTCCGGTGACGTGGTGTTCAACAAGGTTCGCGAGCTGCCGGAGGGTCAGGGTTTCAAC GCCGCCACCGACACCTACGAGGATCTGCTGGCCGCCGGCGTCGCCGACCCGGTCAAGGTC ACCCGCTCCGCTCTGCAGAACGCCGCGTCCATCGCCGGCCTGTTCCTGACCACCGAAGCG GTTGTCGCCAACAAGCCGGAACCGAAGGCCGCCGCTCCGGCCGCCGGTGCCGACATGGGC TACTGA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIIAYDEEARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE KATDTIVKELVAAAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNR FGLDLEFTEGMRFDKGYIAPYFVTNADDQTAVLEDPYILLTSGKVSSQQDVVHIAELVMK SGKPLLIIAEDVDGEALPTLILNKIRGTFNSCAVKAPGFGDRRKAMLQDMAILTGAQVVS DELGLKLDSIDMSVLGTAKKVIVSKDETTIVSGGGDKADVEARVAQIRAEIEKTDSDYDR EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA AKKAESAEAVTSLTGEEATGAAIVFRAIEAPIKQIAENSGVSGDVVFNKVRELPEGQGFN AATDTYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVANKPEPKAAAPAAGADMG Y |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCCCAGTCCCTCGTGCACGAAGGCCTGAAGAACGTTGTCGCCGGCTCC AACCCGATCGCGCTGCGTCGCGGCATCGAGAAGGCCACCGACACCATCGTCAAGGAACTG GTCGCCGCCGCCAAGGACGTGGAGACCAAGGACCAGATCGCCGCCACCGCCACGATCTCC GCAGCCGACCCCGAGGTTGGCGAGAAGATCGCCGAGGCTCTGGACAAGGTCGGTCAGGAC GGCGTCGTGACCGTCGAGGACAACAACCGCTTCGGCCTTGACCTTGAGTTCACCGAGGGC ATGCGTTTCGACAAGGGCTACATCGCCCCGTACTTCGTGACCAACGCGGACGACCAGACC GCGGTTCTTGAGGATCCGTACATCCTCCTGACCTCCGGCAAGGTTTCCAGCCAGCAGGAC GTCGTCCACATCGCCGAGCTCGTCATGAAGTCCGGCAAGCCGCTGCTGATCATCGCCGAG GACGTCGACGGCGAGGCGCTGCCGACCCTCATCCTGAACAAGATCCGCGGCACCTTCAAC TCCTGCGCCGTC |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKATDTIVKELVAAAKDVETKDQIAATATIS AADPEVGEKIAEALDKVGQDGVVTVEDNNRFGLDLEFTEGMRFDKGYIAPYFVTNADDQT AVLEDPYILLTSGKVSSQQDVVHIAELVMKSGKPLLIIAEDVDGEALPTLILNKIRGTFN SCAV |