RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b9942 |
| Chaperonin Group: | I |
| Deposit Date: | 2006-12-18 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Nodularia |
| Species: | spumigena |
| Strain: | CCY9414 |
| Lineage: | root; cellular organisms; Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AAVW01000028 |
| Peptide Genbank Accession: | EAW45429 |
| Best FASTA Match: | b31403 Nostoc flagelliforme CCNUN1 (see fasta results) |
| Date of FASTA search: | 2024-04-22 |
| FASTA identity %: | 84.400 |
| Best BLASTP Match: | b30795 Nostoc linckia NIES-25 (see blastp results) |
| Date of BLASTP search: | 2024-04-22 |
| BLASTP identity %: | 91.848 |
| Source: | Genbank |
| Notes: | Environmental isolate (surface waters, Baltic Sea). From whole genome shotgun sequence. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGAACCGCTAGAGAAATTAAACATGGCAAAAATTATTTCCTTTGATGAAGATTCACGG CGGGCTTTAGAACGGGGAGTCAACGCCCTGGCTGATGCTGTGAAAATTACTTTGGGACCA AGAGGTCGCAACGTCCTTTTAGAAAAGAAATTTGGCGCACCTCAAATCGTTAACGATGGG ATCACTGTCGCCCAAGAAGTGGAATTAGAAGATCCCTTAGAAAACACTGGTGCAAGACTA ATCCAGGAAGTCGCATCCAGAACCAAGGACATTGCTGGTGATGGCACCACTACCGCTACA GTTTTAGCACAGGCGCTGATTAGAGAAGGTTTAAAGAACGTCGCAGCTGGTACTAACCCC ATCAGCTTGAAGCGCGGAATCGACAAAACTATTGAAGCTCTGGTCAAAGAAATTGCCGAG ATGGCCAAGCCTGTAGAAGGCAGTGCGATCGCTCAAGTTGCCACTGTTTCAGCTGGTAAT GATGAACAAGTCGGCGCGATGATTGCCGAAGCAATGGAAAGAGTCACCAAAGACGGTGTA ATCACTGTTGAAGAATCCAAATCTCTCACCACAGAACTGGAAGTAGTGGAAGGGATGCAG ATTGACCGGGGTTATATTTCTCCCTACTTCATCACCAATAACGACCGCCAGATCGTCGAG TTTGAAAACGCTCGCATCCTGATTACTGACAAAAAAATCAGCAGCATTCAGGATTTAGTT CCCGTGTTGGAAAAAGTTGCCCGTGTTGGTCAACCCTTGCTGATTATTGCTGAAGATGTA GAAGGCGACGCTTTAGCAACTTTGGTAGTCAACAAGGCACGGGGTGTGCTGGCTGTGGCT GCGATTAAAGCACCAGGATTTGGCGATCGCCGCAAAGCTTTGTTACAAGACATTGCTATT CTCACCGATGGACAGATGATTTCTGAAGAAATCGGTTTAAGCCTAGACACCGCTACTTTG GAAATGCTGGGAACAGCCCGCAAAATCACCATTGACAAAGAAAGCACCACAATCGTAGCT GCTGGTGAAACCAAACCAGAAGTACAAACCCGAATTGCTCAAATTCGTCAGCAATTAGAA GAAACTGATTCTGACTACGATCAAGAAAAACTCCAAGAACGCATCGCCAAGCTAGCTGGC GGTGTCGCAGTTATTAAAGTGGGTGCGGCCACAGAAACCGAACTCAAAGACCGTAAACTG CGGATTGAGGACGCGCTCAACGCCACTAAAGCTGCTGTCGAAGAAGGCATAGTTCCTGGT GGTGGCACAACCTTAATCAAGTTGATTACCAAAATAGACGCAATCAAAGCCCACCTCAGC GAAGAAGAAAAAATTGGCGCTGATATTGTCAAACGAGCCTTAGAAGCTCCCTTACGTCAA ATAGCAGATAATGCTGGTGACGAAGGTTCCGTGATTGTCTCTCAAGTCAAAGAAAGCGCT GGCAATATCGGTTACAACGCCGCTACTGGAAAATTTGAGGATTTGATTGCAGCTGGTATC ATCGATCCTGCGAAAGTAGTGCGTTCAGCTTTGCAAAATGCCGGTTCCATTGCTGGTATG GTTATTACCACTGAAGCGATCGTAGTCGAAAAACCAGAGCCTAAATCTGCGGCTCCAGCC CCTGACATGGGCGGTATGGGCGGCATGGGCGGCATGGGCGGCATGGGCGGCATGGGTGGC ATGGGCGGCATGGGTATGTTCTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MEPLEKLNMAKIISFDEDSRRALERGVNALADAVKITLGPRGRNVLLEKKFGAPQIVNDG ITVAQEVELEDPLENTGARLIQEVASRTKDIAGDGTTTATVLAQALIREGLKNVAAGTNP ISLKRGIDKTIEALVKEIAEMAKPVEGSAIAQVATVSAGNDEQVGAMIAEAMERVTKDGV ITVEESKSLTTELEVVEGMQIDRGYISPYFITNNDRQIVEFENARILITDKKISSIQDLV PVLEKVARVGQPLLIIAEDVEGDALATLVVNKARGVLAVAAIKAPGFGDRRKALLQDIAI LTDGQMISEEIGLSLDTATLEMLGTARKITIDKESTTIVAAGETKPEVQTRIAQIRQQLE ETDSDYDQEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPG GGTTLIKLITKIDAIKAHLSEEEKIGADIVKRALEAPLRQIADNAGDEGSVIVSQVKESA GNIGYNAATGKFEDLIAAGIIDPAKVVRSALQNAGSIAGMVITTEAIVVEKPEPKSAAPA PDMGGMGGMGGMGGMGGMGGMGGMGMF |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACAGTTTTAGCACAGGCGCTGATTAGAGAAGGTTTAAAGAACGTCGCAGCTGGTACT AACCCCATCAGCTTGAAGCGCGGAATCGACAAAACTATTGAAGCTCTGGTCAAAGAAATT GCCGAGATGGCCAAGCCTGTAGAAGGCAGTGCGATCGCTCAAGTTGCCACTGTTTCAGCT GGTAATGATGAACAAGTCGGCGCGATGATTGCCGAAGCAATGGAAAGAGTCACCAAAGAC GGTGTAATCACTGTTGAAGAATCCAAATCTCTCACCACAGAACTGGAAGTAGTGGAAGGG ATGCAGATTGACCGGGGTTATATTTCTCCCTACTTCATCACCAATAACGACCGCCAGATC GTCGAGTTTGAAAACGCTCGCATCCTGATTACTGACAAAAAAATCAGCAGCATTCAGGAT TTAGTTCCCGTGTTGGAAAAAGTTGCCCGTGTTGGTCAACCCTTGCTGATTATTGCTGAA GATGTAGAAGGCGACGCTTTAGCAACTTTGGTAGTCAACAAGGCACGGGGTGTGCTGGCT GTGGCTGCGATTA |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQALIREGLKNVAAGTNPISLKRGIDKTIEALVKEIAEMAKPVEGSAIAQVATVSA GNDEQVGAMIAEAMERVTKDGVITVEESKSLTTELEVVEGMQIDRGYISPYFITNNDRQI VEFENARILITDKKISSIQDLVPVLEKVARVGQPLLIIAEDVEGDALATLVVNKARGVLA VAAI |