RECORD DETAILS

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Chaperonin ID: b33364
Chaperonin Group: I
Deposit Date: 2018-08-31
Type: ref
Type strain?: no
Genus: Nitzschia
Species: palea
Strain: NIES-2729 chloroplast
Lineage: root; cellular organisms; Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Nitzschia
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: AP018511
Peptide Genbank Accession: BBC77880
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: -
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAAAAAAAATTTTATATCAAGATAATGCTCGTCGAGCTCTAGAACGTGGAATGGAA
ATTATGGTCGAAGCTGTTTCAGTTACATTAGGGCCAAAAGGCCGAAATGTAGTCTTAGAA
AAAGCTTATGGTTCCCCACAAATTGTGAATGATGGAGTTACGATTGCAAAAGAAATTAAT
TTACCAGATCATATTGAGAATACTGGTGTCTCATTAATTCGTCAAGCTGCTTCTAAAACA
AACGATGTGGCAGGGGATGGAACAACAACAGCAACCGTTTTAGCCTATGCTATGGTGAAA
GAAGGTTTAAAAAACGTTGCCGCTGGAGCGAATCCAATTTCAATTAAATTAGGTATGGAG
AAAGCAGCCCAATATTTAGTGACACAAATTAATGAATTTGCTCAACCAGTCGAAGATATT
CAAGCCATTCAACATGTAGCTTCAATTTCTGCAGGAAATGATGATGTGATTGGTTCCTTA
ATAGCTGATGCATTAGCAAAAGTTGGAAAAGAAGGTGTTATCTCGTTAGAAGAAGGAAAG
GGAATTATAACCGAATTAGAAATTACAGAAGGAATGAAACTAGAGAAAGGATTTATTTCT
CCATATTTCATTACAAATACTGATAAAATGGAAGTTTCCTATGACAATCCATATATTTTA
TTAACAGATAAAAGAATTACCTTAGTTCAACAAGATTTATTACCAATTTTAGAGCAGATT
ACAAAAACAAAACGACCACTTCTTATTATTGCAGAGGATGTTGAAAAAGAAGCTTTAGCG
ACACTAATTTTAAATAAATTACGTGGCATTGTAAATGTAGTTGCAATTCGTGCTCCAGGA
TTTGGTGAATTACGCAAACAAATGTTAGCTGATATTGCTATATTAACAGGTGGAACAGTT
ATTACTCAAGATGCCGGATTAAGTCTTGATAATGTTCAATTAAATTTATTAGGTCAAGCC
CGTCGAATTATAGTTACGAAAGATACAACAACAATTGTTGCCGATGGCCAAACCTTAGAT
GATATTAAAGTCCGTTGTGAACAATTGCGCAAGCAAGCGAATCTTGCAGATACTGGGTAT
GAAAAAGAAAAACTACAAGATAGAATTGCAAAATTATCTGGTGGAATTGCCGTTATTAAA
GTTGGTGCGGTAACAGAAACCGAAATGAAAGATAAAAAATTACGACTAGAAGATGCTATT
AATGCAACTCGAGCTGCTGTTGAAGAAGGAATTGTTCCAGGGGGTGGAGCAACATTTGTT
CATTTATCTGAAAATTTAGTTACTTGGGCTAAAAACAATTTAAAAGAAGATGAATTTATT
GGAGCAATGATTATTTCCCGTGCGATTTTAGCACCGTTAAAACGAATTGCAGAAAATGCT
GGAATTAATGGGCCTGTAATTATTGAAGAAGTTCAACAACAAGAATTTGAAATTGGTTAT
AATGCGGCAAAAAATACTTTTGTAAATATGTATGAAGAAGGAATTGTAGATCCAGCAAAA
GTGACTCGTTCGGGATTACAAAATGCAACCTCAATTGCTAGTATGATCTTAACAACGGAA
TGTATTATTGTTGATGATAATTTAACTTCAAACGAATATTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAKKILYQDNARRALERGMEIMVEAVSVTLGPKGRNVVLEKAYGSPQIVNDGVTIAKEIN
LPDHIENTGVSLIRQAASKTNDVAGDGTTTATVLAYAMVKEGLKNVAAGANPISIKLGME
KAAQYLVTQINEFAQPVEDIQAIQHVASISAGNDDVIGSLIADALAKVGKEGVISLEEGK
GIITELEITEGMKLEKGFISPYFITNTDKMEVSYDNPYILLTDKRITLVQQDLLPILEQI
TKTKRPLLIIAEDVEKEALATLILNKLRGIVNVVAIRAPGFGELRKQMLADIAILTGGTV
ITQDAGLSLDNVQLNLLGQARRIIVTKDTTTIVADGQTLDDIKVRCEQLRKQANLADTGY
EKEKLQDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGATFV
HLSENLVTWAKNNLKEDEFIGAMIISRAILAPLKRIAENAGINGPVIIEEVQQQEFEIGY
NAAKNTFVNMYEEGIVDPAKVTRSGLQNATSIASMILTTECIIVDDNLTSNEY
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCAACCGTTTTAGCCTATGCTATGGTGAAAGAAGGTTTAAAAAACGTTGCCGCTGGAGCG
AATCCAATTTCAATTAAATTAGGTATGGAGAAAGCAGCCCAATATTTAGTGACACAAATT
AATGAATTTGCTCAACCAGTCGAAGATATTCAAGCCATTCAACATGTAGCTTCAATTTCT
GCAGGAAATGATGATGTGATTGGTTCCTTAATAGCTGATGCATTAGCAAAAGTTGGAAAA
GAAGGTGTTATCTCGTTAGAAGAAGGAAAGGGAATTATAACCGAATTAGAAATTACAGAA
GGAATGAAACTAGAGAAAGGATTTATTTCTCCATATTTCATTACAAATACTGATAAAATG
GAAGTTTCCTATGACAATCCATATATTTTATTAACAGATAAAAGAATTACCTTAGTTCAA
CAAGATTTATTACCAATTTTAGAGCAGATTACAAAAACAAAACGACCACTTCTTATTATT
GCAGAGGATGTTGAAAAAGAAGCTTTAGCGACACTAATTTTAAATAAATTACGTGGCATT
GTAAATGTAGTTGCAATT
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAYAMVKEGLKNVAAGANPISIKLGMEKAAQYLVTQINEFAQPVEDIQAIQHVASIS
AGNDDVIGSLIADALAKVGKEGVISLEEGKGIITELEITEGMKLEKGFISPYFITNTDKM
EVSYDNPYILLTDKRITLVQQDLLPILEQITKTKRPLLIIAEDVEKEALATLILNKLRGI
VNVVAI