RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close WindowChaperonin ID: | b15299 |
Chaperonin Group: | I |
Deposit Date: | 2009-10-04 |
Type: | cli |
Type strain?: | no |
Genus: | Clostridioides |
Species: | difficile |
Strain: | R20291 |
Lineage: | root; cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | FN545816 |
Peptide Genbank Accession: | CBE01797 |
Best FASTA Match: | b14528 Clostridioides difficile CIP 107932 (see fasta results) |
Date of FASTA search: | 2024-03-25 |
FASTA identity %: | 100.000 |
Best BLASTP Match: | b27751 Peptoclostridium difficile P31 (see blastp results) |
Date of BLASTP search: | 2024-03-25 |
BLASTP identity %: | 100.000 |
Source: | Genbank |
Notes: | Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAAGAAATTAAATTTTCAGAGGAAACAAGAAGAGCTTTAGAAGCTGGTGTAAAT AAATTAGCAGATACAGTAAAAGTAACATTAGGACCTAAAGGAAGAAATGTTATATTAGAT AAAAAATTTGGTTCTCCACTTATAACTAATGATGGAGTAACTATAGCAAAAGAGATAGAA CTAGAAGATAGATTTGAAAATATGGGTGCTCAATTAGTTAAAGAAGTAGCAACTAAAACT AATGATGTAGCTGGAGATGGTACTACAACTGCTACAGTTTTAGCACAAGCTATAATAAGA GAAGGTTTAAAGAATGTAACAGCAGGGGCTAACCCAATACTTTTAAGAAAAGGAATACAA AAAGCAGTAATAGTAGCGGTAGAAGAATTAAAAAATCAATCAAGAATAGTAGAAACACAA GAGGCTATATCTCAAGTTGCTTCTATATCTGCTGGTGATGAAGAAGTTGGAAAATTAATA GCAGAAGCTATGGAAATAGTAGGTAAAGATGGAGTTATAACTGTTGAAGAGTCTCAAACT ATGAATACTGAATTAGATGCTGTTGAAGGTATGCAGTTTGATAGAGGATTTGTTTCTGCA TATATGGTTACAGATGTAGATAAAATGGAAGCAGTTTTAAATGACCCATATATATTAATT ACTGATAAGAAAATATCTAACATACAAGAATTATTACCAGTTCTTGAACAAATAGTTCAA CAAGGTAAAAAGTTATTGATAATAGCTGAAGATGTAGAAGGTGAAGCATTATCTACATTA GTAGTAAATAAATTAAGAGGAACATTTGATGTAGTAGCAGTTAAAGCTCCAGGCTTTGGA GATAGAAGAAAAGAAATGCTTCAAGATATAGCAATACTTACAGGTGCTCAAGTAATATCA GAAGAATTAGGTTATGATTTAAAAGAAGCTGATTTATCTATGCTAGGTAGAGCTTCATCT GTTAAGGTAACTAAAGAAAGTACTACAATAGTAGATGGTTCTGGAGATAAAAAAGCTATA GAAGATAGAGTAACTCAAATTAAACATCAAGTAGAGCAAACTACTTCAGATTTTGATAGA GAGAAATTAATGGAAAGATTAGCTAAACTTGCTGGAGGAGTAGCTGTTGTAAAAGTTGGA GCTGCTACAGAAGTAGAGTTAAAAGAAAGAAAATTAAGAATAGAAGATGCTCTTAATGCA ACTAGAGCAGCTGTAGAAGAAGGAATAGTAGCTGGTGGAGGAACTGCTTTTGTTAGTGTT ATACCAGCAATAGGAACACTAATTGAGAGTTTAGAAGGAGAAGTTAAACTAGGTGCTCAA ATAGTTAAAAAAGCGTTAGAAGAGCCATTAAGACAAATAGCTATAAATGCTGGTCTTGAA GGTGCTGTAATTGTGCAAAATGTTGTTAATTCTGAAGCAGAAACTGGATTTGACGCATTG AATGAAAAATATGTAAATATGATAGAAGCTGGTATAGTTGACCCAACTAAAGTTAGTAGA AGTGCTTTACAAAATGCTGCATCAATAGCAAGTACTTTCTTAACTACTGAAGCTGCTGTT GCTGACCTTCCTGAAAAAGAAGATGCAGGAATGCCAGGAATGGGTGGCGGAATGCCTGGT ATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFSEETRRALEAGVNKLADTVKVTLGPKGRNVILDKKFGSPLITNDGVTIAKEIE LEDRFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPILLRKGIQ KAVIVAVEELKNQSRIVETQEAISQVASISAGDEEVGKLIAEAMEIVGKDGVITVEESQT MNTELDAVEGMQFDRGFVSAYMVTDVDKMEAVLNDPYILITDKKISNIQELLPVLEQIVQ QGKKLLIIAEDVEGEALSTLVVNKLRGTFDVVAVKAPGFGDRRKEMLQDIAILTGAQVIS EELGYDLKEADLSMLGRASSVKVTKESTTIVDGSGDKKAIEDRVTQIKHQVEQTTSDFDR EKLMERLAKLAGGVAVVKVGAATEVELKERKLRIEDALNATRAAVEEGIVAGGGTAFVSV IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDAL NEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEAAVADLPEKEDAGMPGMGGGMPG MM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT GTAGTAGCAGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIIREGLKNVTAGANPILLRKGIQKAVIVAVEELKNQSRIVETQEAISQVASIS AGDEEVGKLIAEAMEIVGKDGVITVEESQTMNTELDAVEGMQFDRGFVSAYMVTDVDKME AVLNDPYILITDKKISNIQELLPVLEQIVQQGKKLLIIAEDVEGEALSTLVVNKLRGTFD VVAV |