RECORD DETAILS

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Chaperonin ID: b15299
Chaperonin Group: I
Deposit Date: 2009-10-04
Type: cli
Type strain?: no
Genus: Clostridioides
Species: difficile
Strain: R20291
Lineage: root; cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: FN545816
Peptide Genbank Accession: CBE01797
Best FASTA Match: b14528 Clostridioides difficile CIP 107932 (see fasta results)
Date of FASTA search: 2024-03-25
FASTA identity %: 100.000
Best BLASTP Match: b27751 Peptoclostridium difficile P31 (see blastp results)
Date of BLASTP search: 2024-03-25
BLASTP identity %: 100.000
Source: Genbank
Notes: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCTAAAGAAATTAAATTTTCAGAGGAAACAAGAAGAGCTTTAGAAGCTGGTGTAAAT
AAATTAGCAGATACAGTAAAAGTAACATTAGGACCTAAAGGAAGAAATGTTATATTAGAT
AAAAAATTTGGTTCTCCACTTATAACTAATGATGGAGTAACTATAGCAAAAGAGATAGAA
CTAGAAGATAGATTTGAAAATATGGGTGCTCAATTAGTTAAAGAAGTAGCAACTAAAACT
AATGATGTAGCTGGAGATGGTACTACAACTGCTACAGTTTTAGCACAAGCTATAATAAGA
GAAGGTTTAAAGAATGTAACAGCAGGGGCTAACCCAATACTTTTAAGAAAAGGAATACAA
AAAGCAGTAATAGTAGCGGTAGAAGAATTAAAAAATCAATCAAGAATAGTAGAAACACAA
GAGGCTATATCTCAAGTTGCTTCTATATCTGCTGGTGATGAAGAAGTTGGAAAATTAATA
GCAGAAGCTATGGAAATAGTAGGTAAAGATGGAGTTATAACTGTTGAAGAGTCTCAAACT
ATGAATACTGAATTAGATGCTGTTGAAGGTATGCAGTTTGATAGAGGATTTGTTTCTGCA
TATATGGTTACAGATGTAGATAAAATGGAAGCAGTTTTAAATGACCCATATATATTAATT
ACTGATAAGAAAATATCTAACATACAAGAATTATTACCAGTTCTTGAACAAATAGTTCAA
CAAGGTAAAAAGTTATTGATAATAGCTGAAGATGTAGAAGGTGAAGCATTATCTACATTA
GTAGTAAATAAATTAAGAGGAACATTTGATGTAGTAGCAGTTAAAGCTCCAGGCTTTGGA
GATAGAAGAAAAGAAATGCTTCAAGATATAGCAATACTTACAGGTGCTCAAGTAATATCA
GAAGAATTAGGTTATGATTTAAAAGAAGCTGATTTATCTATGCTAGGTAGAGCTTCATCT
GTTAAGGTAACTAAAGAAAGTACTACAATAGTAGATGGTTCTGGAGATAAAAAAGCTATA
GAAGATAGAGTAACTCAAATTAAACATCAAGTAGAGCAAACTACTTCAGATTTTGATAGA
GAGAAATTAATGGAAAGATTAGCTAAACTTGCTGGAGGAGTAGCTGTTGTAAAAGTTGGA
GCTGCTACAGAAGTAGAGTTAAAAGAAAGAAAATTAAGAATAGAAGATGCTCTTAATGCA
ACTAGAGCAGCTGTAGAAGAAGGAATAGTAGCTGGTGGAGGAACTGCTTTTGTTAGTGTT
ATACCAGCAATAGGAACACTAATTGAGAGTTTAGAAGGAGAAGTTAAACTAGGTGCTCAA
ATAGTTAAAAAAGCGTTAGAAGAGCCATTAAGACAAATAGCTATAAATGCTGGTCTTGAA
GGTGCTGTAATTGTGCAAAATGTTGTTAATTCTGAAGCAGAAACTGGATTTGACGCATTG
AATGAAAAATATGTAAATATGATAGAAGCTGGTATAGTTGACCCAACTAAAGTTAGTAGA
AGTGCTTTACAAAATGCTGCATCAATAGCAAGTACTTTCTTAACTACTGAAGCTGCTGTT
GCTGACCTTCCTGAAAAAGAAGATGCAGGAATGCCAGGAATGGGTGGCGGAATGCCTGGT
ATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAKEIKFSEETRRALEAGVNKLADTVKVTLGPKGRNVILDKKFGSPLITNDGVTIAKEIE
LEDRFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPILLRKGIQ
KAVIVAVEELKNQSRIVETQEAISQVASISAGDEEVGKLIAEAMEIVGKDGVITVEESQT
MNTELDAVEGMQFDRGFVSAYMVTDVDKMEAVLNDPYILITDKKISNIQELLPVLEQIVQ
QGKKLLIIAEDVEGEALSTLVVNKLRGTFDVVAVKAPGFGDRRKEMLQDIAILTGAQVIS
EELGYDLKEADLSMLGRASSVKVTKESTTIVDGSGDKKAIEDRVTQIKHQVEQTTSDFDR
EKLMERLAKLAGGVAVVKVGAATEVELKERKLRIEDALNATRAAVEEGIVAGGGTAFVSV
IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDAL
NEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEAAVADLPEKEDAGMPGMGGGMPG
MM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
GTAGTAGCAGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQAIIREGLKNVTAGANPILLRKGIQKAVIVAVEELKNQSRIVETQEAISQVASIS
AGDEEVGKLIAEAMEIVGKDGVITVEESQTMNTELDAVEGMQFDRGFVSAYMVTDVDKME
AVLNDPYILITDKKISNIQELLPVLEQIVQQGKKLLIIAEDVEGEALSTLVVNKLRGTFD
VVAV