RECORD DETAILS

Add Record To Cart - Printer-friendly version - Close Window
Chaperonin ID: b1273
Chaperonin Group: I
Deposit Date: 2001-10-16
Type: ref
Type strain?: yes
Genus: Deinococcus
Species: radiodurans
Strain: R1
Lineage: root; cellular organisms; Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_001263
Peptide Genbank Accession: NP_294330
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: From complete genome. Type strain: strain ATCC 13939 = CCUG 27074 = CIP 104750 = DSM 20539 = HAMBI 1924 = IFO (now NBRC) 15346 = LMG 4051 = UWO 288 = VKM B-1422. ATCC lists additional synonym R1 (smooth).
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCTAAACAGCTCGTGTTTGATGAATCCGCCCGCCGCAGCCTGGAACGCGGCGTCAAT
GCCGTCGCCAACGCCGTCAAGGTGACCCTGGGGCCCCGTGGCCGCAACGTGGTCATCGAG
AAGAAGTTCGGCAGCCCCACCATCACCAAGGACGGCGTGACCGTCGCCAAGGAAGTGGAG
CTGGAGGACAAGCTGGAGAACATCGGCGCCCAGCTGCTCAAGGAAGTCGCCAGCAAGACC
AACGACATCACGGGTGACGGCACCACCACCGCCACCGTGCTGGGCCAGGCCATTGTGAAA
GAAGGTCTGCGTAACGTGGCCGCCGGCGCCAACCCCCTCGCCCTGAAGCGCGGCATCGAC
AAGGCCGTGGCTGTGGCCATCGAGGAAATCAAGAAGCTGGCCGTGTCGGTCGAGGACAGC
GAAGCCATCAAGAAGGTCGCGGGCATTTCGGCCAACGACGAAACTGTCGGCCAGGAAATC
GCTTCTGCGATGGACAAGGTCGGCAAGGAAGGCGTCATCACCATCGAAGAGTCCAAGGGC
TTCGACACCGAAGTGGACGTGGTGGAAGGGATGCAGTTCGACAAGGGCTTTATCAACCCC
TACTTCATCACCAACCCCGAGAAGATGGAAGCCGTCCTCGAAGACGCCTACATCCTGATC
AACGAAAAGAAGATCAGCAACCTCAAGGACATGCTCCCGGTGCTGGAAAAGGTCGCCCAG
ACGGGCCGCCCCCTGCTGATTATCGCCGAGGACGTGGAAGGCGAAGCCCTCGCCACCCTG
GTGGTCAACAAGCTGCGCGGCACCCTGAACATCGCTGCGGTCAAGGCCCCCGGCTTCGGT
GACCGCCGCAAGGAAATGCTGCGCGACATCGCGGCCGTGACCGGCGGCGAAGTGGTCAGC
GAAGACCTCGGCCACAAGCTGGAAAATGTCGGCATGGAAATGCTGGGCCGCGCCGCGCGC
ATCCGCATCACCAAGGACGAAACCACCATCGTGGACGGCAAGGGTGAGCAGGCCCAGATC
GACGCCCGCGTCAACGCCATCAAGGGCGAACTCGACAGCACCGACTCCGACTACGCCCGC
GAGAAGCTCCAGGAGCGCCTCGCCAAGCTCAGCGGCGGCGTCGCCGTCATCCGCGTGGGT
GCCGCGACCGAAACCGAACTCAAGGAAAAGAAGCACCGCTACGAGGACGCCCTGTCCACC
GCCCGCTCGGCTGTGGAAGAAGGCATCGTGGCAGGCGGCGGCACCACCCTGCTGCGCGTG
ATCCCCGCCGTCCGCAAGGCCGCCGAGAGCCTGACCGGCGACGAAGCGACCGGCGCACGC
ATCCTGATTCGCGCGCTGGAAGAACCCGCCCGCCAGATCGCCGCGAACGCCGGTGAAGAA
GGCAGTGTCATCGTGAATGCAGTGGTGGGCAGCGACAAGGCCCGTTACGGCTTCAACGCC
GCGACCGGCGAGTACGTGGAGGACATGGTGGCCGCCGGGATCGTGGACCCCGCCAAGGTG
ACCCGCACCGCGCTGCAGAACGCCGCGAGCATCGGCGCCCTGATCCTGACCACCGAAGCC
ATCGTCAGCGACAAGCCCGAGAAGGCTGCGCCTGCGATGCCTCAGGGTGGCGGCGACATG
GGCGGCATGGGCGGCATGGACTTCTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAKQLVFDESARRSLERGVNAVANAVKVTLGPRGRNVVIEKKFGSPTITKDGVTVAKEVE
LEDKLENIGAQLLKEVASKTNDITGDGTTTATVLGQAIVKEGLRNVAAGANPLALKRGID
KAVAVAIEEIKKLAVSVEDSEAIKKVAGISANDETVGQEIASAMDKVGKEGVITIEESKG
FDTEVDVVEGMQFDKGFINPYFITNPEKMEAVLEDAYILINEKKISNLKDMLPVLEKVAQ
TGRPLLIIAEDVEGEALATLVVNKLRGTLNIAAVKAPGFGDRRKEMLRDIAAVTGGEVVS
EDLGHKLENVGMEMLGRAARIRITKDETTIVDGKGEQAQIDARVNAIKGELDSTDSDYAR
EKLQERLAKLSGGVAVIRVGAATETELKEKKHRYEDALSTARSAVEEGIVAGGGTTLLRV
IPAVRKAAESLTGDEATGARILIRALEEPARQIAANAGEEGSVIVNAVVGSDKARYGFNA
ATGEYVEDMVAAGIVDPAKVTRTALQNAASIGALILTTEAIVSDKPEKAAPAMPQGGGDM
GGMGGMDF
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCCACCGTGCTGGGCCAGGCCATTGTGAAAGAAGGTCTGCGTAACGTGGCCGCCGGCGCC
AACCCCCTCGCCCTGAAGCGCGGCATCGACAAGGCCGTGGCTGTGGCCATCGAGGAAATC
AAGAAGCTGGCCGTGTCGGTCGAGGACAGCGAAGCCATCAAGAAGGTCGCGGGCATTTCG
GCCAACGACGAAACTGTCGGCCAGGAAATCGCTTCTGCGATGGACAAGGTCGGCAAGGAA
GGCGTCATCACCATCGAAGAGTCCAAGGGCTTCGACACCGAAGTGGACGTGGTGGAAGGG
ATGCAGTTCGACAAGGGCTTTATCAACCCCTACTTCATCACCAACCCCGAGAAGATGGAA
GCCGTCCTCGAAGACGCCTACATCCTGATCAACGAAAAGAAGATCAGCAACCTCAAGGAC
ATGCTCCCGGTGCTGGAAAAGGTCGCCCAGACGGGCCGCCCCCTGCTGATTATCGCCGAG
GACGTGGAAGGCGAAGCCCTCGCCACCCTGGTGGTCAACAAGCTGCGCGGCACCCTGAAC
ATCGCTGCGGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLGQAIVKEGLRNVAAGANPLALKRGIDKAVAVAIEEIKKLAVSVEDSEAIKKVAGIS
ANDETVGQEIASAMDKVGKEGVITIEESKGFDTEVDVVEGMQFDKGFINPYFITNPEKME
AVLEDAYILINEKKISNLKDMLPVLEKVAQTGRPLLIIAEDVEGEALATLVVNKLRGTLN
IAAV