RECORD DETAILS

Add Record To Cart - Printer-friendly version - Close Window
Chaperonin ID: b3901
Chaperonin Group: I
Deposit Date: 2003-03-17
Type: ref
Type strain?: no
Genus: Vibrio
Species: parahaemolyticus
Strain: RIMD 2210633
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_004603
Peptide Genbank Accession: NP_799230
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Chromosome I. Additional cpn60 gene on chromosome II.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCTGCTAAAGACGTTAAATTTGGTAATGACGCACGAGTTAAGATGCTAGAAGGTGTA
AACGTTCTGGCTGACGCAGTGAAAGTAACACTGGGTCCTAAAGGTCGTAACGTAGTTCTA
GATAAATCTTTCGGTGCTCCAACCATCACTAAAGACGGTGTATCTGTAGCGCGTGAAATT
GAGCTGGAAGACAAGTTCCAGAACATGGGCGCGCAAATGGTTAAAGAAGTAGCGTCTAAA
GCAAACGACGCTGCGGGTGACGGTACAACAACAGCAACCGTACTAGCGCAAGCAATCGTA
AACGAAGGTCTAAAAGCAGTTGCAGCGGGTATGAACCCAATGGATCTTAAGCGCGGTATC
GACAAAGCTGTTGCAGCGGCAGTAGAGCAACTAAAAGAGCTTTCTGTTGAGTGTAACGAC
ACCAAAGCAATCGCTCAGGTTGGTACTATCTCTGCGAACTCTGACGCAAGCGTAGGTAAC
ATCATTGCTGAAGCAATGGAACGCGTTGGCCGCGACGGTGTTATCACTGTTGAAGAAGGT
CAGGCTCTACAAGACGAGCTAGACGTAGTAGAAGGTATGCAGTTCGATCGCGGTTACCTA
TCTCCTTACTTCATCAACAACCAAGAAGCGGGCAGCGTTGAGCTAGAAAACCCATTCATC
CTTCTAGTTGATAAGAAGATCTCAAACATTCGTGAGCTTCTACCAACTCTAGAAGCAGTA
GCAAAAGCATCTCGTCCACTGCTAATCATCGCAGAAGACGTAGAAGGCGAAGCTCTAGCG
ACATTGGTTGTGAACAACATGCGTGGCATCGTGAAAGTTGCTGCGGTTAAAGCGCCTGGT
TTTGGTGACCGTCGTAAAGCAATGCTACAAGACATCGCTATCCTAACTGGCGGTACTGTG
ATTTCTGAAGAAATCGGTCTAGAACTAGAAAAAGTAACGCTTGAAGATCTAGGTCAGGCT
AAGCGCGTAAGCATCACGAAAGAAAACTCAACCATCATCGATGGTGCGGGTGAAGAAGCG
ATGATCCAAGGCCGCGTTGCTCAAATTCGTCAACAAATCGAAGACGCAACTTCAGACTAC
GACAAAGAGAAACTGCAAGAGCGCGTTGCTAAACTGGCTGGCGGTGTTGCAGTAATCAAA
GTTGGTGCAGCGACTGAAGTTGAAATGAAAGAGAAAAAAGACCGCGTAGAAGACGCGCTA
CACGCGACTCGCGCAGCGGTTGAAGAAGGCGTAGTTGCAGGTGGTGGTGTTGCACTAATC
CGCGCTGCATCTAAGATTGTTGACCTAGAAGGCGACAACGAAGAACAAAACGTTGGTATC
CGCGTTGCGCTACGCGCAATGGAAGCACCAATCCGTCAAATCACGAAGAACGCAGGTGAC
GAAGACTCTGTTGTTGCGAACAACGTGAAAGCGGGTGAAGGTTCTTACGGCTACAACGCA
GCGACGGGTGAATACGGTGACATGCTAGAGATGGGTATCCTAGACCCAACTAAAGTAACT
CGTAGCGCTCTACAATTTGCAGCGTCTGTCGCTGGTCTCATGATCACAACAGAAGCGATG
GTAACTGACCTACCACAAAAAGAAAGCGCAGGCATGCCTGACATGGGTGGTATGGGCGGT
ATGGGTGGCATGGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEQLKELSVECNDTKAIAQVGTISANSDASVGNIIAEAMERVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVELENPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLELEKVTLEDLGQAKRVSITKENSTIIDGAGEEAMIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKIVDLEGDNEEQNVGIRVALRAMEAPIRQITKNAGDEDSVVANNVKAGEGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKESAGMPDMGGMGG
MGGMGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCAACCGTACTAGCGCAAGCAATCGTAAACGAAGGTCTAAAAGCAGTTGCAGCGGGTATG
AACCCAATGGATCTTAAGCGCGGTATCGACAAAGCTGTTGCAGCGGCAGTAGAGCAACTA
AAAGAGCTTTCTGTTGAGTGTAACGACACCAAAGCAATCGCTCAGGTTGGTACTATCTCT
GCGAACTCTGACGCAAGCGTAGGTAACATCATTGCTGAAGCAATGGAACGCGTTGGCCGC
GACGGTGTTATCACTGTTGAAGAAGGTCAGGCTCTACAAGACGAGCTAGACGTAGTAGAA
GGTATGCAGTTCGATCGCGGTTACCTATCTCCTTACTTCATCAACAACCAAGAAGCGGGC
AGCGTTGAGCTAGAAAACCCATTCATCCTTCTAGTTGATAAGAAGATCTCAAACATTCGT
GAGCTTCTACCAACTCTAGAAGCAGTAGCAAAAGCATCTCGTCCACTGCTAATCATCGCA
GAAGACGTAGAAGGCGAAGCTCTAGCGACATTGGTTGTGAACAACATGCGTGGCATCGTG
AAAGTTGCTGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAAVEQLKELSVECNDTKAIAQVGTIS
ANSDASVGNIIAEAMERVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQEAG
SVELENPFILLVDKKISNIRELLPTLEAVAKASRPLLIIAEDVEGEALATLVVNNMRGIV
KVAAV