RECORD DETAILS

For pacc NC_005085, see also: b4340

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Chaperonin ID: b4341
Chaperonin Group: I
Deposit Date: 2003-09-15
Type: ref
Type strain?: yes
Genus: Chromobacterium
Species: violaceum
Strain: -
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Chromobacterium group
Original ID: ATCC 12472
CUTC ID: -
Nucleotide Genbank Accession: NC_005085
Peptide Genbank Accession: NP_903684
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: cpn60 2 of 2. Type strain: strain ATCC 12472 = CCUG 213 = CIP 103350 = DSM 30191 = IFO (now NBRC) 12614 = JCM 1249 = LMG 1267 = NCCB 80006 = NCTC 9757. ATCC catalogue lists additional synonyms MK, NCIB 9131.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAGCTAAAGACGTAAAGTTCGGTGATTCCGCTCGCAGCAAGATGGTTGCCGGCGTC
AACATCCTGGCCGACGCGGTCAAGGTTACCCTGGGTCCCAAGGGCCGCAACGTTGTGCTG
GACCGCTCCTTCGGCGCGCCGACCATCACCAAGGACGGCGTGTCGGTGGCCAAGGAAATC
GAACTGAAGGACAAGTTCGAGAACATGGGCGCCCAGATGGTCAAGGAAGTGGCTTCCAAG
ACCTCCGACGTGGCCGGCGACGGCACCACCACCGCCACCGTGCTGGCTCAGGCCATCGTG
CAGGAAGGCATGAAGTTCGTCGCCGCCGGCATGAACCCGATGGACCTGAAGCGCGGCATC
GACAAGGCTGTGGTGTCACTGGTCGGCGAGATCGCCAAGATCGCCAAGCCCTGCGCGACC
TCCAAGGAAATCGCCCAGGTAGGCTCCATCTCCGCCAACTCCGATAGCGATATCGGCGAA
ATCATCGCCAATGCGATGGAAAAAGTGGGCAAGGAAGGCGTGATCACCGTTGAAGACGGC
AAGAGCCTGAACAACGAACTGGACGTGGTGGAAGGCATGCAGTTCGACCGCGGTTACCTG
TCCCCGTACTTCATCAACAACCAGGACAAGCAGATCGCCGCCCTGGACAATCCGTTCATC
CTGCTGTTCGACAAGAAGATCTCCAACATCCGCGACCTGCTGCCGGTGCTGGAGCAAGTG
GCCAAGTCCGGCCGCCCGCTGCTGATCATCGCCGAAGACGTCGAAGGCGAAGCGCTGGCC
ACTCTGGTGGTGAACACCATTCGCGGCATCCTGAAGGTCGTGGCTGTCAAGGCTCCGGGC
TTCGGCGACCGCCGCAAGGCCATGCTGACCGACATCGCCGTGCTGACCGGCGGCGAAGTC
ATCGCCGAAGAAGTCGGCCTGACTCTGGAAAAAGCCACGCTGGACCAACTGGGCCAGGCC
AAGCGCGTCGAAGTGGGCAAGGAAAACACCACCATCATCGACGGCGCCGGCGAAGCCGCC
ACCATCCAGGCTCGCGTGGGCGAGATCCGCAAGCAGATCGAAGAAGCCACTTCCGACTAC
GACCGCGAGAAGCTGCAAGAGCGCGTGGCCAAGCTGGCCGGCGGCGTTGCCGTGATCAAG
GTCGGCGCCGCCACCGAAGTGGAAATGAAAGAGAAGAAGGCCCGCGTCGAAGACGCGCTG
CACGCCACCCGCGCAGCCGTTGAAGAAGGCGTGGTGCCCGGTGGCGGCGTGGCCCTGCTG
CGTGCCCGCGCGACGCTGGAAAACCTGAAGACCGACAATGCCGAACAGGAAGCTGGCGTG
AAGATCGTGCTGCGCGCGATCGAAGCCCCGCTGCGCCAGATCGTCAAGAACGCCGGCGAC
GAGCCGTCGGTTGTCGTGAACAAGGTGCTGGAAGGCAAGGGCAACTTCGGTTACAACGCC
GCCAGCGGCGAATACGGCGACATGCTGGAAATGGGCGTGCTGGATCCGGCCAAGGTGACC
CGCTCCGCTCTGCAGCACGCCGCTTCCGTGGCCGGCCTGATGCTGACCACCGACTGCATG
ATCGCCGAGCTGCCGGAAGACAAGCCGGCCGCTGGCATGCCGGACATGGGCGGCATGGGC
GGCATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKDVKFGDSARSKMVAGVNILADAVKVTLGPKGRNVVLDRSFGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVQEGMKFVAAGMNPMDLKRGI
DKAVVSLVGEIAKIAKPCATSKEIAQVGSISANSDSDIGEIIANAMEKVGKEGVITVEDG
KSLNNELDVVEGMQFDRGYLSPYFINNQDKQIAALDNPFILLFDKKISNIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLTDIAVLTGGEV
IAEEVGLTLEKATLDQLGQAKRVEVGKENTTIIDGAGEAATIQARVGEIRKQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RARATLENLKTDNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGNFGYNA
ASGEYGDMLEMGVLDPAKVTRSALQHAASVAGLMLTTDCMIAELPEDKPAAGMPDMGGMG
GMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCCACCGTGCTGGCTCAGGCCATCGTGCAGGAAGGCATGAAGTTCGTCGCCGCCGGCATG
AACCCGATGGACCTGAAGCGCGGCATCGACAAGGCTGTGGTGTCACTGGTCGGCGAGATC
GCCAAGATCGCCAAGCCCTGCGCGACCTCCAAGGAAATCGCCCAGGTAGGCTCCATCTCC
GCCAACTCCGATAGCGATATCGGCGAAATCATCGCCAATGCGATGGAAAAAGTGGGCAAG
GAAGGCGTGATCACCGTTGAAGACGGCAAGAGCCTGAACAACGAACTGGACGTGGTGGAA
GGCATGCAGTTCGACCGCGGTTACCTGTCCCCGTACTTCATCAACAACCAGGACAAGCAG
ATCGCCGCCCTGGACAATCCGTTCATCCTGCTGTTCGACAAGAAGATCTCCAACATCCGC
GACCTGCTGCCGGTGCTGGAGCAAGTGGCCAAGTCCGGCCGCCCGCTGCTGATCATCGCC
GAAGACGTCGAAGGCGAAGCGCTGGCCACTCTGGTGGTGAACACCATTCGCGGCATCCTG
AAGGTCGTGGCTGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQAIVQEGMKFVAAGMNPMDLKRGIDKAVVSLVGEIAKIAKPCATSKEIAQVGSIS
ANSDSDIGEIIANAMEKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNQDKQ
IAALDNPFILLFDKKISNIRDLLPVLEQVAKSGRPLLIIAEDVEGEALATLVVNTIRGIL
KVVAV