RECORD DETAILS

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Chaperonin ID: b5846
Chaperonin Group: I
Deposit Date: 2004-08-09
Type: ref
Type strain?: no
Genus: Leifsonia
Species: xyli
Strain: subsp. xyli str. CTCB07
Lineage: root; cellular organisms; Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae;Microbacteriaceae; Leifsonia
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_006087
Peptide Genbank Accession: YP_062649
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: From complete genome sequence. Sugarcane pathogen.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAAAGATCATTGCTTTTGACGAGGACGCGCGTCGCGGTCTCGAGCGCGGCCTCAAC
ATCCTGGCTGACACGGTCAAGGTGACGTTGGGCCCGGGCGGGTGCAACGTCGTCCTCGAG
AAGAAGTGGGGAGCGCCGACCATCACCAACGACGGCGTCTCCATCGCGAAGGAGATCGAA
CTCGACGACCCCTACGAGAAGATCGGCGCGGAGCTGGTCAAAGAGGTCGCGAAGAAGACC
GACGATGTCGCCGGCGACGGAACCACCACCGCCACCGTGCTCGCTCAGGCGCTCGTCAAG
GAGGGTCTGCGCAACGTCGCGGCCGGCGCCGACCCGATCTCGCTGAAGCGCGGTATCGAG
AAGGCTGTCGAGGCCGTCACCGCCGAGCTGGTCGGCAACGCCAAGGAGGTCGAGAGCAAG
GCGCAGATCGCGGCCACCGCCTCCATCTCCGCCGGGGACACCACCATCGGGGACATCATC
GCCGAGGCGATCGACAAGGTCGGCAAGGAGGGCGTCGTCACCGTCGAGGAGTCGAACACC
TTCGGCACCGAGCTGGAGCTGACCGAGGGCATGCGCTTCGACAAGGGCTTCCTGTCGCAG
TACTTCGTCACCGACCAGGACCGCCAGGAGGCGGTGTTCGAGGATGCTTACATCCTCATC
GCCAACCAGAAGATCTCCTCGATCAAAGACCTGCTCCCGATCGTGGACAAGGTGATCCAG
GCCAACAAGCAGCTCCTCATCATCGCTGAGGACGTCGACGGCGAGGCGCTGGCGACCCTG
ATCGTCAACAAGATCCGCGGCATCTTCAAGTCCGTCGCCGTCAAGGCTCCGGGCTTCGGT
GACCGCCGCAAGGCCATGCTGCAGGACATCGCGATCCTCACCGGTGGCCAGGTCATCTCC
GAGGAGGTCGGCCTCAAGCTGGAGAACGTCACCCTCGACCTGCTCGGCAAGGCCCGCAAG
GTCGTCATCACCAAGGACGAGACCACCATCGTCGAAGGTGCGGGCGACCCCGACCAGATC
GCCGGCCGCGTGGCCCAGATCCGTGGCGAGATCGACAACTCCGACTCCGACTACGACCGC
GAGAAGCTCCAGGAGCGTCTCGCCAAGCTCGCTGGTGGCGTCGCCGTCATCAAGGCGGGT
GCGGCCACCGAGGTCGAGCTCAAGGAGCGCAAGCACCGCATCGAGGACGCCGTCCGCAAC
GCGAAGGCCGCTGTCGAAGAGGGCATCGTGGCCGGTGGGGGCGTCGCCCTCATTCAGGCC
GGCAAGCTCGCCTTCGAGAAGCTGTCGCTCGAGGGTGACGAGGCCACCGGCGCCAACATC
GTCAAGGTCGCCATCGAAGCCCCGATGAAGCAGATCGCGATCAACGCAGGCATGGAGCCG
GGCGTCGTCGTGGCCCGTGTCCGCGAGCTCCCGCTCGGCCACGGTCTCAACGCGGCCACC
GGCGAATACGTCGACATGCTCATCGCGGGCATCAACGACCCGGTGAAGGTCACCCGCTCG
GCGCTGCAGAACGCCGCCTCCATCGCGGGCCTGTTCCTCACCACCGAGGCTGTCGTGGCC
GACAAGCCGGAGAAGGCCGCCCCTGTCGCGGCCGAACCGGGTGCGGGCATGGACTTCTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAKIIAFDEDARRGLERGLNILADTVKVTLGPGGCNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPISLKRGIE
KAVEAVTAELVGNAKEVESKAQIAATASISAGDTTIGDIIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGFLSQYFVTDQDRQEAVFEDAYILIANQKISSIKDLLPIVDKVIQ
ANKQLLIIAEDVDGEALATLIVNKIRGIFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIS
EEVGLKLENVTLDLLGKARKVVITKDETTIVEGAGDPDQIAGRVAQIRGEIDNSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKLAFEKLSLEGDEATGANIVKVAIEAPMKQIAINAGMEPGVVVARVRELPLGHGLNAAT
GEYVDMLIAGINDPVKVTRSALQNAASIAGLFLTTEAVVADKPEKAAPVAAEPGAGMDF
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCCACCGTGCTCGCTCAGGCGCTCGTCAAGGAGGGTCTGCGCAACGTCGCGGCCGGCGCC
GACCCGATCTCGCTGAAGCGCGGTATCGAGAAGGCTGTCGAGGCCGTCACCGCCGAGCTG
GTCGGCAACGCCAAGGAGGTCGAGAGCAAGGCGCAGATCGCGGCCACCGCCTCCATCTCC
GCCGGGGACACCACCATCGGGGACATCATCGCCGAGGCGATCGACAAGGTCGGCAAGGAG
GGCGTCGTCACCGTCGAGGAGTCGAACACCTTCGGCACCGAGCTGGAGCTGACCGAGGGC
ATGCGCTTCGACAAGGGCTTCCTGTCGCAGTACTTCGTCACCGACCAGGACCGCCAGGAG
GCGGTGTTCGAGGATGCTTACATCCTCATCGCCAACCAGAAGATCTCCTCGATCAAAGAC
CTGCTCCCGATCGTGGACAAGGTGATCCAGGCCAACAAGCAGCTCCTCATCATCGCTGAG
GACGTCGACGGCGAGGCGCTGGCGACCCTGATCGTCAACAAGATCCGCGGCATCTTCAAG
TCCGTCGCCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQALVKEGLRNVAAGADPISLKRGIEKAVEAVTAELVGNAKEVESKAQIAATASIS
AGDTTIGDIIAEAIDKVGKEGVVTVEESNTFGTELELTEGMRFDKGFLSQYFVTDQDRQE
AVFEDAYILIANQKISSIKDLLPIVDKVIQANKQLLIIAEDVDGEALATLIVNKIRGIFK
SVAV