RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close WindowChaperonin ID: | b5846 |
Chaperonin Group: | I |
Deposit Date: | 2004-08-09 |
Type: | ref |
Type strain?: | no |
Genus: | Leifsonia |
Species: | xyli |
Strain: | subsp. xyli str. CTCB07 |
Lineage: | root; cellular organisms; Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae;Microbacteriaceae; Leifsonia |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NC_006087 |
Peptide Genbank Accession: | YP_062649 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | From complete genome sequence. Sugarcane pathogen. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGATCATTGCTTTTGACGAGGACGCGCGTCGCGGTCTCGAGCGCGGCCTCAAC ATCCTGGCTGACACGGTCAAGGTGACGTTGGGCCCGGGCGGGTGCAACGTCGTCCTCGAG AAGAAGTGGGGAGCGCCGACCATCACCAACGACGGCGTCTCCATCGCGAAGGAGATCGAA CTCGACGACCCCTACGAGAAGATCGGCGCGGAGCTGGTCAAAGAGGTCGCGAAGAAGACC GACGATGTCGCCGGCGACGGAACCACCACCGCCACCGTGCTCGCTCAGGCGCTCGTCAAG GAGGGTCTGCGCAACGTCGCGGCCGGCGCCGACCCGATCTCGCTGAAGCGCGGTATCGAG AAGGCTGTCGAGGCCGTCACCGCCGAGCTGGTCGGCAACGCCAAGGAGGTCGAGAGCAAG GCGCAGATCGCGGCCACCGCCTCCATCTCCGCCGGGGACACCACCATCGGGGACATCATC GCCGAGGCGATCGACAAGGTCGGCAAGGAGGGCGTCGTCACCGTCGAGGAGTCGAACACC TTCGGCACCGAGCTGGAGCTGACCGAGGGCATGCGCTTCGACAAGGGCTTCCTGTCGCAG TACTTCGTCACCGACCAGGACCGCCAGGAGGCGGTGTTCGAGGATGCTTACATCCTCATC GCCAACCAGAAGATCTCCTCGATCAAAGACCTGCTCCCGATCGTGGACAAGGTGATCCAG GCCAACAAGCAGCTCCTCATCATCGCTGAGGACGTCGACGGCGAGGCGCTGGCGACCCTG ATCGTCAACAAGATCCGCGGCATCTTCAAGTCCGTCGCCGTCAAGGCTCCGGGCTTCGGT GACCGCCGCAAGGCCATGCTGCAGGACATCGCGATCCTCACCGGTGGCCAGGTCATCTCC GAGGAGGTCGGCCTCAAGCTGGAGAACGTCACCCTCGACCTGCTCGGCAAGGCCCGCAAG GTCGTCATCACCAAGGACGAGACCACCATCGTCGAAGGTGCGGGCGACCCCGACCAGATC GCCGGCCGCGTGGCCCAGATCCGTGGCGAGATCGACAACTCCGACTCCGACTACGACCGC GAGAAGCTCCAGGAGCGTCTCGCCAAGCTCGCTGGTGGCGTCGCCGTCATCAAGGCGGGT GCGGCCACCGAGGTCGAGCTCAAGGAGCGCAAGCACCGCATCGAGGACGCCGTCCGCAAC GCGAAGGCCGCTGTCGAAGAGGGCATCGTGGCCGGTGGGGGCGTCGCCCTCATTCAGGCC GGCAAGCTCGCCTTCGAGAAGCTGTCGCTCGAGGGTGACGAGGCCACCGGCGCCAACATC GTCAAGGTCGCCATCGAAGCCCCGATGAAGCAGATCGCGATCAACGCAGGCATGGAGCCG GGCGTCGTCGTGGCCCGTGTCCGCGAGCTCCCGCTCGGCCACGGTCTCAACGCGGCCACC GGCGAATACGTCGACATGCTCATCGCGGGCATCAACGACCCGGTGAAGGTCACCCGCTCG GCGCTGCAGAACGCCGCCTCCATCGCGGGCCTGTTCCTCACCACCGAGGCTGTCGTGGCC GACAAGCCGGAGAAGGCCGCCCCTGTCGCGGCCGAACCGGGTGCGGGCATGGACTTCTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIIAFDEDARRGLERGLNILADTVKVTLGPGGCNVVLEKKWGAPTITNDGVSIAKEIE LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPISLKRGIE KAVEAVTAELVGNAKEVESKAQIAATASISAGDTTIGDIIAEAIDKVGKEGVVTVEESNT FGTELELTEGMRFDKGFLSQYFVTDQDRQEAVFEDAYILIANQKISSIKDLLPIVDKVIQ ANKQLLIIAEDVDGEALATLIVNKIRGIFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIS EEVGLKLENVTLDLLGKARKVVITKDETTIVEGAGDPDQIAGRVAQIRGEIDNSDSDYDR EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA GKLAFEKLSLEGDEATGANIVKVAIEAPMKQIAINAGMEPGVVVARVRELPLGHGLNAAT GEYVDMLIAGINDPVKVTRSALQNAASIAGLFLTTEAVVADKPEKAAPVAAEPGAGMDF |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTCGCTCAGGCGCTCGTCAAGGAGGGTCTGCGCAACGTCGCGGCCGGCGCC GACCCGATCTCGCTGAAGCGCGGTATCGAGAAGGCTGTCGAGGCCGTCACCGCCGAGCTG GTCGGCAACGCCAAGGAGGTCGAGAGCAAGGCGCAGATCGCGGCCACCGCCTCCATCTCC GCCGGGGACACCACCATCGGGGACATCATCGCCGAGGCGATCGACAAGGTCGGCAAGGAG GGCGTCGTCACCGTCGAGGAGTCGAACACCTTCGGCACCGAGCTGGAGCTGACCGAGGGC ATGCGCTTCGACAAGGGCTTCCTGTCGCAGTACTTCGTCACCGACCAGGACCGCCAGGAG GCGGTGTTCGAGGATGCTTACATCCTCATCGCCAACCAGAAGATCTCCTCGATCAAAGAC CTGCTCCCGATCGTGGACAAGGTGATCCAGGCCAACAAGCAGCTCCTCATCATCGCTGAG GACGTCGACGGCGAGGCGCTGGCGACCCTGATCGTCAACAAGATCCGCGGCATCTTCAAG TCCGTCGCCGTC |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQALVKEGLRNVAAGADPISLKRGIEKAVEAVTAELVGNAKEVESKAQIAATASIS AGDTTIGDIIAEAIDKVGKEGVVTVEESNTFGTELELTEGMRFDKGFLSQYFVTDQDRQE AVFEDAYILIANQKISSIKDLLPIVDKVIQANKQLLIIAEDVDGEALATLIVNKIRGIFK SVAV |