RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b5855 |
| Chaperonin Group: | I |
| Deposit Date: | 2004-08-16 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Desulfotalea |
| Species: | psychrophila |
| Strain: | LSv54 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_006138 |
| Peptide Genbank Accession: | YP_063926 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Sulphate-reducing bacterium from permanently cold Arctic sediments. Type strain: strain LSv54 = DSM 12343. From complete genome sequence. |
|
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGGAAAAGACATTAAGTACGGAGTGAAGGCTCGCGAGTCTGTTCTCATTGGTGTT AACACTCTTGCGAACGCAGTTAAGGTAACCCTCGGACCCAAGGGACGTAACGTTCTGATC GAGAAATCTTTTGGCGCACCTACCATTACCAAAGATGGTGTTTCTGTTGCTAAAGAGATC GAGCTTAAGGACAAGTTCGAGAACATGGGCGCACAGATGGTTAAAGAGGTTGCTTCTAAG ACCTCTGATGTAGCCGGTGATGGTACCACCACTGCAACCGTACTTGCTCAAGCCATTTAC ACCGAAGGTGTTAAGCTTGTTGCAGCTGGTGGCAACCCAATGGAGATCAAGCGCGGTATC GACAAAGGTGTTGAGGCTGTTATTGCTGAGCTTCGTAACATTGCGACCCCTACCAAAGAG CAAAAAGAGATCGCTCAGGTTGGTACCATTTCTGCAAACTCCGATGAGACCATTGGTAAC ATCATTGCAGAGGCTATGGACAAGGTTGGTAAAGAAGGCGTTATCACCGTTGAAGAAGCA AAATCAATGGAGACCACCTTGGACGTTGTTGAGGGTATGCAATTTGACCGTGGATACCTC TCTCCATACTTCGTTACCGATCCAGAGCGTATGGAAGTAATCATGGACGATCCTTATATT CTCCTTGTTGAGAAGAAGGTTTCCAACATGAAAGATCTCCTCCCAGTACTTGAGCAAGTT GCCAAGATGGGTAAAGGTCTCTTCATCCTTGCTGAAGACGTTGACGGTGAAGCCCTTGCA ACCCTCGTTGTGAACAAGCTTCGTGGTACCATCAATGTTGCAGCTGTTAAGGCTCCAGGT TTCGGCGATCGTCGTAAGGCAATGCTTGAAGATATCGCTATCCTTACCGGTGGTCAGGTT ATCAGCGAAGACCTCGGCATCAAGCTTGAGAACGTAACCCTTAACGATCTTGGTACCTGT AAGCGTATCGTGACCGATAAGGATGCTACCACCATCGTAGACGGTGCTGGTGATGCTGCT CAGCTTTCTTCACGCGTTAAGCAGATCCACGCTCAAATCGCTGATACCACCTCTGATTAC GATCGTGAGAAGCTCCAAGAGCGTCTTGCCAAGCTTATCGGTGGTGTTGCGGTAATTAAC GTTGGAGCTGCAACCGAGATCGAGATGAAAGAGAAGAAAGGTCGTGTTGAAGATGCACTC AACGCAACCCGCGCAGCGGTTGAAGAAGGTGTTGTTCCTGGTGGTGGTGTTGCTTACATG CGGTGGCTTGACGCCCTTGAAGCCCTTCATCTTGAAGGCGAGCAAGAGCTTGGTAAGAAA ATCTTATCCGTGCCCTTGAAGAGCCTGTTCGTCAGATTGCCAATAATGCTGGCCGTGAAG GTTCTGTTATTGTTGATGCAGTTAAGAAGCTTGAAGGACCAAACGGTTTCAACGCAGCTA CCGAAGTTTACGAAGACCTTATCGCTGCAGGTGTTATCGATCCTGCCAAGGTTACCCGTA CAGCCCTGCAAAACGCAGCTTCTGTATCCGGTATGCTTCTCACCACCGAGTGTGTGA |
|
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAGKDIKYGVKARESVLIGVNTLANAVKVTLGPKGRNVLIEKSFGAPTITKDGVSVAKEI ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIYTEGVKLVAAGGNPMEIKRGI DKGVEAVIAELRNIATPTKEQKEIAQVGTISANSDETIGNIIAEAMDKVGKEGVITVEEA KSMETTLDVVEGMQFDRGYLSPYFVTDPERMEVIMDDPYILLVEKKVSNMKDLLPVLEQV AKMGKGLFILAEDVDGEALATLVVNKLRGTINVAAVKAPGFGDRRKAMLEDIAILTGGQV ISEDLGIKLENVTLNDLGTCKRIVTDKDATTIVDGAGDAAQLSSRVKQIHAQIADTTSDY DREKLQERLAKLIGGVAVINVGAATEIEMKEKKGRVEDALNATRAAVEEGVVPGGGVAYM RWLDALEALHLEGEQELGKKILSVPLKSLFVRLPIMLAVKVLLLLMQLRSLKDQTVSTQL PKFTKTLSLQVLSILPRLPVQPCKTQLLYPVCFSPPSV |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTACTTGCTCAAGCCATTTACACCGAAGGTGTTAAGCTTGTTGCAGCTGGTGGC AACCCAATGGAGATCAAGCGCGGTATCGACAAAGGTGTTGAGGCTGTTATTGCTGAGCTT CGTAACATTGCGACCCCTACCAAAGAGCAAAAAGAGATCGCTCAGGTTGGTACCATTTCT GCAAACTCCGATGAGACCATTGGTAACATCATTGCAGAGGCTATGGACAAGGTTGGTAAA GAAGGCGTTATCACCGTTGAAGAAGCAAAATCAATGGAGACCACCTTGGACGTTGTTGAG GGTATGCAATTTGACCGTGGATACCTCTCTCCATACTTCGTTACCGATCCAGAGCGTATG GAAGTAATCATGGACGATCCTTATATTCTCCTTGTTGAGAAGAAGGTTTCCAACATGAAA GATCTCCTCCCAGTACTTGAGCAAGTTGCCAAGATGGGTAAAGGTCTCTTCATCCTTGCT GAAGACGTTGACGGTGAAGCCCTTGCAACCCTCGTTGTGAACAAGCTTCGTGGTACCATC AATGTTGCAGCTGTT |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIYTEGVKLVAAGGNPMEIKRGIDKGVEAVIAELRNIATPTKEQKEIAQVGTIS ANSDETIGNIIAEAMDKVGKEGVITVEEAKSMETTLDVVEGMQFDRGYLSPYFVTDPERM EVIMDDPYILLVEKKVSNMKDLLPVLEQVAKMGKGLFILAEDVDGEALATLVVNKLRGTI NVAAV |