RECORD DETAILS

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Chaperonin ID: b7720
Chaperonin Group: I
Deposit Date: 2005-10-13
Type: ref
Type strain?: yes
Genus: Nitrosococcus
Species: oceani
Strain: -
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus
Original ID: ATCC 19707
CUTC ID: -
Nucleotide Genbank Accession: NC_007484
Peptide Genbank Accession: YP_344897
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Marine nitrifying bacterium.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAGCTAAAGATGTAAGATTTAGCGAAGATGCACGCCATCGCATGATGCATGGCGTC
AATGTTTTGGCCGATGCGGTACGGGTCACCTTGGGCCCCAGGGGGCGGAATGTGGTGCTG
GAGAAGAGCTTTGGCGCACCCACCATTACCAAGGACGGCGTTAGCGTTGCCAAAGAAATT
GAACTTAAGGATAGGTTCGAGAACATGGGCGCCCAGATGGTCAAGGAAGTGGCTTCCCAG
ACTTCCGATGTGGCAGGAGATGGGACCACCACAGCAACTGTGCTGGCTCAGAGCATACTG
CGCGAGGGTATGAAGGCGGTGGCCGCTGGCATGAACCCCATGGATCTCAAACGGGGCGTT
GACAAGGCAGTGGTGGCTGCGGTTGAAGAACTGAAAAAACTCTCCAAGCCCTGCGAGGAT
AGCAAGGCTATCGGCCAGGTGGGCACTATCTCCGCCAATGCGGAAGAGTCCGTGGGTAAA
ATCATTGCCGAAGCCATGGATAAGGTAGGTAAGGAAGGCGTGATTACGGTGGAGGAAGGT
TCTGGCTTGGATAATGAGCTGGAAGTTGTGGAAGGAATGCAGTTTGATCGGGGTTATCTC
TCGCCCTATTTCATCACCGATCAGCAGTCCATGGCGGCGGATCTGGATGATCCTTATATC
CTTATTCACGATAAAAAAATCTCCAATATTCGCGACTTGCTGCCGGTGCTGGAAAGCGTG
GCCAAAGCGGGTAAGCCGTTACTGGTGATTTCTGAGGATGTGGAAGGCGAAGCGCTGGCG
ACCCTGGTGGTCAATACCATCCGCGGTATCGTTAAAGTGTGCGCGGTCAAGGCACCAGGC
TTTGGTGATCGCCGTAAGGCCATGCTGGAAGATATCGCCGTGCTGACTGGCGGCACGGTC
ATTTCCGAGGAGGTTGGTCTTTCCCTGGATAAAGTGACCCTGGATGATTTGGGTCGGGCC
AAGAAAATCACCGTTAATAAGGAAAACACCACCATCGTAGATGGTGCGGGTAGTGCTGAC
GATATTAAAGCCCGGGTCGAGCAAGTCCGGATACAGATTGAGGAAGCCACTTCCGATTAC
GATAAAGAGAAGCTCCAGGAGCGGGTTGCTAAATTGGCAGGTGGCGTGGCCGTCATCAAG
GTGGGCGCCGCGACCGAAATGGAGATGAAAGAGAAAAAGGCCCGTGTGGAAGACGCTCTG
CACGCCACCCGTGCGGCGGTAGAAGAAGGCGTGGTCCCTGGTGGTGGGGTAGCGCTGATT
CGGGCTCTATTAGGTATTAAGGATCTTAAAGGTGCGAATCATGATCAAGATGTGGGCATT
AATATTGCCCGTCGCGCCATGGAAGAACCTCTGCGCCAGATCGTGAACAATTCTGGGGAA
GAGGCTTCTGTCATCGTTAACCAGATTAAGGGAGGCGAGGGTAACTACGGTTACAATGCC
GCCACCGGAGAGTTTGGCGACATGATTGCCATGGGAATCCTGGACCCCACCAAGGTCAGC
CGGACGGCCCTGCAAAATGCTGCCAGCGTGGCGGGTCTGATGATCACCACCGAGGCGATG
ATTGCCGAGGCGCCGAAGGACGAGGAGGCATCTCCTGGCGGTGCGCCTGGCATGGGCGGC
GGCATGGGTGGTATGGGCGGCATGGGTGATATGGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKDVRFSEDARHRMMHGVNVLADAVRVTLGPRGRNVVLEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQMVKEVASQTSDVAGDGTTTATVLAQSILREGMKAVAAGMNPMDLKRGV
DKAVVAAVEELKKLSKPCEDSKAIGQVGTISANAEESVGKIIAEAMDKVGKEGVITVEEG
SGLDNELEVVEGMQFDRGYLSPYFITDQQSMAADLDDPYILIHDKKISNIRDLLPVLESV
AKAGKPLLVISEDVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDIAVLTGGTV
ISEEVGLSLDKVTLDDLGRAKKITVNKENTTIVDGAGSADDIKARVEQVRIQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALLGIKDLKGANHDQDVGINIARRAMEEPLRQIVNNSGEEASVIVNQIKGGEGNYGYNA
ATGEFGDMIAMGILDPTKVSRTALQNAASVAGLMITTEAMIAEAPKDEEASPGGAPGMGG
GMGGMGGMGDMGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCAACTGTGCTGGCTCAGAGCATACTGCGCGAGGGTATGAAGGCGGTGGCCGCTGGCATG
AACCCCATGGATCTCAAACGGGGCGTTGACAAGGCAGTGGTGGCTGCGGTTGAAGAACTG
AAAAAACTCTCCAAGCCCTGCGAGGATAGCAAGGCTATCGGCCAGGTGGGCACTATCTCC
GCCAATGCGGAAGAGTCCGTGGGTAAAATCATTGCCGAAGCCATGGATAAGGTAGGTAAG
GAAGGCGTGATTACGGTGGAGGAAGGTTCTGGCTTGGATAATGAGCTGGAAGTTGTGGAA
GGAATGCAGTTTGATCGGGGTTATCTCTCGCCCTATTTCATCACCGATCAGCAGTCCATG
GCGGCGGATCTGGATGATCCTTATATCCTTATTCACGATAAAAAAATCTCCAATATTCGC
GACTTGCTGCCGGTGCTGGAAAGCGTGGCCAAAGCGGGTAAGCCGTTACTGGTGATTTCT
GAGGATGTGGAAGGCGAAGCGCTGGCGACCCTGGTGGTCAATACCATCCGCGGTATCGTT
AAAGTGTGCGCGGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQSILREGMKAVAAGMNPMDLKRGVDKAVVAAVEELKKLSKPCEDSKAIGQVGTIS
ANAEESVGKIIAEAMDKVGKEGVITVEEGSGLDNELEVVEGMQFDRGYLSPYFITDQQSM
AADLDDPYILIHDKKISNIRDLLPVLESVAKAGKPLLVISEDVEGEALATLVVNTIRGIV
KVCAV