RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b10701 |
| Chaperonin Group: | I |
| Deposit Date: | 2007-12-09 |
| Type: | cli |
| Type strain?: | no |
| Genus: | Helicobacter |
| Species: | pylori |
| Strain: | HPAG1 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_008086 |
| Peptide Genbank Accession: | YP_626751 |
| Best FASTA Match: | b21175 Helicobacter pylori R030b (see fasta results) |
| Date of FASTA search: | 2024-04-22 |
| FASTA identity %: | 98.000 |
| Best BLASTP Match: | Unpublished data. Please contact us if you require more information. |
| Date of BLASTP search: | 2024-04-22 |
| BLASTP identity %: | 100.000 |
| Source: | Genbank |
| Notes: | This strain was isolated from a Swedish patient with chronic atrophic gastritis. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGAAATTAAATTTTCAGATAGCGCGAGAAACCTTTTATTTGAAGGCGTGAGA CAACTCCATGACGCTGTCAAAGTAACCATGGGGCCAAGAGGCAGGAATGTGTTGATCCAA AAAAGCTATGGCGCTCCAAGCATCACCAAAGACGGCGTGAGCGTGGCTAAAGAGATTGAA TTAAGTTGCCCAGTGGCTAACATGGGCGCTCAACTCGTTAAAGAAGTAGCGAGCAAAACC GCTGATGCTGCCGGCGATGGCACGACCACAGCGACCGTGCTAGCTTATAGCATTTTTAAA GAGGGCTTGAGGAATATCACGGCTGGGGCTAACCCTATTGAAGTGAAACGAGGCATGGAT AAAGCCGCTGAAGCGATCATTAATGAGCTTAAAAAAGCCAGCAAAAAAGTGGGCGGTAAA GAAGAAATCACCCAAGTGGCGACCATTTCTGCCAACTCGGATCACAATATCGGGAAACTC ATCGCTGACGCTATGGAAAAAGTGGGTAAAGACGGCGTGATCACCGTTGAAGAAGCTAAG GGCATTGAAGACGAACTAGATGTCGTAGAAGGCATGCAATTTGATAGAGGCTACCTCTCC CCTTACTTTGTAACCAACGCTGAGAAAATGACCGCTCAATTGGATAACGCTTACATCCTT TTAACGGATAAAAAAATCTCTAGCATGAAAGACATTCTCCCATTATTGGAAAAAACCATG AAAGAGGGCAAACCGCTTTTAATCATCGCTGAAGACATTGAGGGCGAAGCTTTAACGACT CTAGTGGTGAATAAATTAAGAGGCGTGTTGAATATCGCAGCGGTTAAAGCTCCAGGCTTT GGGGACAGAAGAAAAGAAATGCTCAAAGACATCGCTATTTTAACCGGCGGTCAAGTTATT AGCGAAGAATTGGGCTTGAGTCTAGAAAACGCTGAAGTGGAGTTTTTAGGCAAAGCCGGA AGGATTGTGATTGACAAAGACAACACCACGATCGTAGATGGCAAAGGCCATAGCGATGAT GTTAAAGACAGAGTCGCGCAAATCAAAACCCAAATTGCAAGCACGACAAGCGATTATGAC AAAGAAAAATTGCAAGAAAGATTGGCTAAACTCTCTGGCGGTGTGGCCGTGATTAAAGTG GGCGCTGCGAGTGAAGTGGAAATGAAAGAGAAAAAAGACAGGGTGGATGATGCATTAAGC GCGACTAAAGCGGCGGTTGAAGAAGGCATTGTGATTGGCGGCGGTGCGGCTCTCATTCGC GCGGCTCAAAAAGTGCATTTGAATTTACACGATGATGAAAAAGTGGGCTATGAAATCATC ATGCGCGCCATTAAAGCCCCATTAGCTCAAATCGCTATCAATGCCGGTTATGATGGCGGT GTGGTCGTGAATGAAGTAGAAAAACACGAAGGGCATTTTGGTTTTAACGCTAGCAATGGC AAGTATGTGGATATGTTTAAAGAAGGCATTATTGACCCCTTAAAAGTAGAAAGGATCGCT TTACAAAATGCGGTTTCGGTTTCAAGCCTGCTTTTAACCACAGAAGCCACCGTGCATGAA ATCAAAGAAGAAAAAGCGGCCCCAGCAATGCCTGATATGGGTGGCATGGGCGGTATGGGA GGCATGGGTGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVI SEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYD KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGHFGFNASNG KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG GMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACCGTGCTAGCTTATAGCATTTTTAAAGAGGGCTTGAGGAATATCACGGCTGGGGCT AACCCTATTGAAGTGAAACGAGGCATGGATAAAGCCGCTGAAGCGATCATTAATGAGCTT AAAAAAGCCAGCAAAAAAGTGGGCGGTAAAGAAGAAATCACCCAAGTGGCGACCATTTCT GCCAACTCGGATCACAATATCGGGAAACTCATCGCTGACGCTATGGAAAAAGTGGGTAAA GACGGCGTGATCACCGTTGAAGAAGCTAAGGGCATTGAAGACGAACTAGATGTCGTAGAA GGCATGCAATTTGATAGAGGCTACCTCTCCCCTTACTTTGTAACCAACGCTGAGAAAATG ACCGCTCAATTGGATAACGCTTACATCCTTTTAACGGATAAAAAAATCTCTAGCATGAAA GACATTCTCCCATTATTGGAAAAAACCATGAAAGAGGGCAAACCGCTTTTAATCATCGCT GAAGACATTGAGGGCGAAGCTTTAACGACTCTAGTGGTGAATAAATTAAGAGGCGTGTTG AATATCGCAGCGGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATIS ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKM TAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVL NIAAV |