RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b7595 |
| Chaperonin Group: | I |
| Deposit Date: | 2005-07-18 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Shewanella |
| Species: | frigidimarina |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella |
| Original ID: | NCIMB 400 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_008345 |
| Peptide Genbank Accession: | YP_752326 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From whole genome sequence. Marine bacterium isolated from the North Sea, off the coast of Aberdeen (UK). |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAAGAAGTCTTATTTGGTAACGACGCACGCGTAAAAATGCTTGCTGGTGTT AACATCCTAGCCAACGCAGTTAAAGTAACCTTAGGCCCTAAAGGCCGTAACGTTGTTTTA GATAAAAGCTTTGGTTCGCCAATGATCACCAAAGATGGTGTGTCAGTTGCTAAAGAAATC GAACTAACAGACAAGTTCGAAAACATGGGCGCACAAATGGTTAAAGAAGTTGCTTCTAAA GCCAATGATGCTGCCGGTGACGGTACCACTACTGCAACAGTATTAGCACAAGCTATTGTT GTTGAAGGCCTAAAAGCAGTTGCAGCGGGTATGAACCCAATGGACCTTAAGCGCGGTATC GACAAAGCGGTTATCGCAGCCGTTGCTGAACTTAAACTACTTTCTCAAGAATGTTCAGAC ACTAAAGCGATTGCTCAAGTAGGTACAATTTCTGCTAACTCTGACGAGTCAATCGGCGAC ATCATTGCAACCGCAATGGAAAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGAAGGC CAAGCGCTTGAAAACGAATTAGACGTTGTTGAAGGTATGCAGTTTGACCGTGGTTATTTA TCACCATACTTCATCAACAAGCCAGAAACTGGCAGCATTGAATTAGACAGCCCATTCATT TTATTAGTAGACAAAAAAGTCTCTAATATCCGTGAATTGTTGCCAATCCTTGAAGGTCTA GCTAAAACAGGTAAGCCATTGCTTATCGTTGCAGAAGACGTTGAAGGCGAAGCATTAGCA ACACTAGTTGTGAACAACATGCGTGGCATCGTTAAAGTAGCTGCTGTTAAAGCTCCTGGC TTTGGTGACCGTCGTAAAGCAATGCTTCAAGACGTTGCTATCCTAACTGGCGGTACTGTT ATCGCTGAAGAAATCGGTCTAGAACTTGAAAAAGCCACTCTAGAAGATTTAGGTACAGCT AAGCGCGTAATCATCACTAAAGATAACACTACAATCATCGATGGTAGTGGCGACCAAGTG CAAATTTCTGCACGTGTTTCGCAAATCAAACAACAAGTTGAAGATTCAACTTCAGACTAC GACAAAGAAAAGCTTCAAGAGCGTATGGCTAAGTTAGCTGGCGGTGTTGCAGTAATCAAA GTTGGCGCAGCAACAGAAGTTGAAATGAAAGAGAAAAAAGCTCGCGTAGAAGATGCATTG CATGCAACTCGCGCAGCGGTTGAAGAAGGTGTGGTCGCCGGTGGTGGTGTTGCCCTTGTT CGCGTAGCAAGCAAAATTAAAGATGTTGAAGTATTGAACGAAGACCAAAAGCACGGTGTA GTAATCGCACTACGTGCTATGGAAGCGCCTTTACGTCAAATCGCAACTAACGCAGGTCAA GAAGCATCAGTTGTGGCTAACACTGTTAAAAACGGCGAAGGTAACTTCGGTTACAACGCG GGTAACGATACTTACGGTGACATGTTAGAAATGGGTATCCTAGACCCAACTAAAGTGACT CGTAGCGCGCTACAGTTCGCCGCATCTATTGCTGGTCTTATGATCACAACAGAAGCGATG ATTGCTGAAGTACCACAAGATTCTGCACCAGATATGGGCGGAATGGGTGGAATGGGCGGA ATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEVLFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPMITKDGVSVAKEI ELTDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGI DKAVIAAVAELKLLSQECSDTKAIAQVGTISANSDESIGDIIATAMEKVGKEGVITVEEG QALENELDVVEGMQFDRGYLSPYFINKPETGSIELDSPFILLVDKKVSNIRELLPILEGL AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV IAEEIGLELEKATLEDLGTAKRVIITKDNTTIIDGSGDQVQISARVSQIKQQVEDSTSDY DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV RVASKIKDVEVLNEDQKHGVVIALRAMEAPLRQIATNAGQEASVVANTVKNGEGNFGYNA GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMIAEVPQDSAPDMGGMGGMGG MGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACAGTATTAGCACAAGCTATTGTTGTTGAAGGCCTAAAAGCAGTTGCAGCGGGTATG AACCCAATGGACCTTAAGCGCGGTATCGACAAAGCGGTTATCGCAGCCGTTGCTGAACTT AAACTACTTTCTCAAGAATGTTCAGACACTAAAGCGATTGCTCAAGTAGGTACAATTTCT GCTAACTCTGACGAGTCAATCGGCGACATCATTGCAACCGCAATGGAAAAAGTCGGTAAA GAAGGCGTTATCACCGTTGAAGAAGGCCAAGCGCTTGAAAACGAATTAGACGTTGTTGAA GGTATGCAGTTTGACCGTGGTTATTTATCACCATACTTCATCAACAAGCCAGAAACTGGC AGCATTGAATTAGACAGCCCATTCATTTTATTAGTAGACAAAAAAGTCTCTAATATCCGT GAATTGTTGCCAATCCTTGAAGGTCTAGCTAAAACAGGTAAGCCATTGCTTATCGTTGCA GAAGACGTTGAAGGCGAAGCATTAGCAACACTAGTTGTGAACAACATGCGTGGCATCGTT AAAGTAGCTGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVVEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKLLSQECSDTKAIAQVGTIS ANSDESIGDIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETG SIELDSPFILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIV KVAAV |