RECORD DETAILS
For pacc NC_008786, see also: b9312
Add Record To Cart - Printer-friendly version - Close WindowChaperonin ID: | b9311 |
Chaperonin Group: | I |
Deposit Date: | 2006-07-31 |
Type: | ref |
Type strain?: | no |
Genus: | Verminephrobacter |
Species: | eiseniae |
Strain: | EF01-2 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter; Verminephrobacter eiseniae |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NC_008786 |
Peptide Genbank Accession: | YP_999124 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Organism name has no standing in nomenclature as of 2006-07-31. Acidovorax symbiont of Eisenia fetida (common brandling worm). From complete genome sequence. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGCCGAATATCATGCTGCACGACGACGAGGCCCGCATGGCCCTCGGTCGCGGGGTCGCC AAACTGGCCAAAGCGGTGCGCGGCACGCTCGGCCCGCGCGGAATGAATGCGATCATCGAC CGCCCGATTGGCACGCCGATCATCTCGCGCGATGGCGTCAGCATCGCCAACGAGATCGAG CTGGAAGACCCGTTCGAAAACATCGGCGCGCAGGTGCTGCGCGAAGTCTCGAAGCAGACC AATGAAGTCGCCGGCGACGGCACTACCACGGCCACCGTGCTGGCCGATGCGCTGGTCCAG GACGGCCTTGCCAGTCTCGTGGCCGGCGCCAACCCCGTCGAGCTGGTTCAGGGCCTGGAG ATCGCGGTGCAAGAGGTGATCGCCGCGCTCAGGCGCGCAGCGACACCGCTGCGCGGGGGC AAAGAGGTGCGCGCGGTGGCCGTGGTCGCCGCCAATGACGAGGTCACCGGCGCGATAGTG GCCGAAGCGCTCGAGCGGGTGGGGCCCGATGGCATCGTCGATGTCGAATTCGGCACGACG GTCGAAACCCGTCTCGAAGTGGTCGACGGGATGGCGTTCGATCGCGGCTACCTCTCGCAC CATATGGTCACGGACATCGAGAGAATGCAGGTGGTGCTGGACAACCCGCTGATCCTGATG ACCGACCAGCGGCTGCAGTCGCCGGAAGAGGTGGCGGCGCTTCAGGCGCTGGCCGTGCAC GGCAAACGCCCGCTGCTGATCATTGCGGAGGAGGTTGCCCCGGCCTGTGTCATGACCCTG CTTGCGTGGCGGGACAAGGGCGGGATGCCGGTGGCGGCGATTCATCCGCCGGAATACGGG CATTGGCGCAAGGCCATGCTCGAAGACATCGCCATCGTCACCGGCGGCCGGGTGATCGCC CGCGATCTGGGCGGCAAGCTCGAAGCCACGGAACTGCGCGATCTCGGCAGCGCGCGGCAA GTGCGTATCTCGTCGAACCAGACCATCATTACCGCTGGCGGCGGCGACCCGGCCGCCGTT GCCGCGCGCCGTCAGCAGGTCGCGCGCCAGTATGAGATGGCCCCGGAAAATGTCGAACGC GACAAATTTCAGGTGCGTATCGCCAAGTTGTCCGGCGGCACCGCGATGATCTTCGCCGGC GGCGCCACGCCAGTCGAACAAAAGCGCCGGCTGCACTTGATCGAGGATGCGATCAATGCG GCACGCGCGGCGATTGCCGAGGGTGTCGTGCCAGGTGGCGGAATGGCGCTGCTGCGCGTG TCGGACGAACTCGAAAGCGTGATTGCGCGGACCCAGGGCAGTGTCCAGCAGGGGGTCAGG CTGCTGCAGCGCGTGCTGACGAAACCGCTTTATCACATCGCGACCAATTGCGGTCTCGAC GGCGCGGCGATCGTGTCCAGGGCGGTGCGCGCGAAACCGGGCCACGGTCTGGACGCGCGC ACGGGCCAGTTCGTCAACCTGATGGAGGCGGGCATCATCGATCCGGTCAAGGTCAGTTAC AGCGCAGTGCGCAACGCGGCTTCGGTTGCCGGCTTGATCCTGACCACCCAGACGCTGATT GCCAAAAAGCCGGAAACGATCGACCCGACCGCTGGCCCGGCGCTTGGCGCCGGCGCCGAA TTGCTCGGGCGGAAATAG |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MPNIMLHDDEARMALGRGVAKLAKAVRGTLGPRGMNAIIDRPIGTPIISRDGVSIANEIE LEDPFENIGAQVLREVSKQTNEVAGDGTTTATVLADALVQDGLASLVAGANPVELVQGLE IAVQEVIAALRRAATPLRGGKEVRAVAVVAANDEVTGAIVAEALERVGPDGIVDVEFGTT VETRLEVVDGMAFDRGYLSHHMVTDIERMQVVLDNPLILMTDQRLQSPEEVAALQALAVH GKRPLLIIAEEVAPACVMTLLAWRDKGGMPVAAIHPPEYGHWRKAMLEDIAIVTGGRVIA RDLGGKLEATELRDLGSARQVRISSNQTIITAGGGDPAAVAARRQQVARQYEMAPENVER DKFQVRIAKLSGGTAMIFAGGATPVEQKRRLHLIEDAINAARAAIAEGVVPGGGMALLRV SDELESVIARTQGSVQQGVRLLQRVLTKPLYHIATNCGLDGAAIVSRAVRAKPGHGLDAR TGQFVNLMEAGIIDPVKVSYSAVRNAASVAGLILTTQTLIAKKPETIDPTAGPALGAGAE LLGRK |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCCGATGCGCTGGTCCAGGACGGCCTTGCCAGTCTCGTGGCCGGCGCC AACCCCGTCGAGCTGGTTCAGGGCCTGGAGATCGCGGTGCAAGAGGTGATCGCCGCGCTC AGGCGCGCAGCGACACCGCTGCGCGGGGGCAAAGAGGTGCGCGCGGTGGCCGTGGTCGCC GCCAATGACGAGGTCACCGGCGCGATAGTGGCCGAAGCGCTCGAGCGGGTGGGGCCCGAT GGCATCGTCGATGTCGAATTCGGCACGACGGTCGAAACCCGTCTCGAAGTGGTCGACGGG ATGGCGTTCGATCGCGGCTACCTCTCGCACCATATGGTCACGGACATCGAGAGAATGCAG GTGGTGCTGGACAACCCGCTGATCCTGATGACCGACCAGCGGCTGCAGTCGCCGGAAGAG GTGGCGGCGCTTCAGGCGCTGGCCGTGCACGGCAAACGCCCGCTGCTGATCATTGCGGAG GAGGTTGCCCCGGCCTGTGTCATGACCCTGCTTGCGTGGCGGGACAAGGGCGGGATGCCG GTGGCGGCGATT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLADALVQDGLASLVAGANPVELVQGLEIAVQEVIAALRRAATPLRGGKEVRAVAVVA ANDEVTGAIVAEALERVGPDGIVDVEFGTTVETRLEVVDGMAFDRGYLSHHMVTDIERMQ VVLDNPLILMTDQRLQSPEEVAALQALAVHGKRPLLIIAEEVAPACVMTLLAWRDKGGMP VAAI |