RECORD DETAILS

For pacc NC_008786, see also: b9312

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Chaperonin ID: b9311
Chaperonin Group: I
Deposit Date: 2006-07-31
Type: ref
Type strain?: no
Genus: Verminephrobacter
Species: eiseniae
Strain: EF01-2
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter; Verminephrobacter eiseniae
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_008786
Peptide Genbank Accession: YP_999124
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Organism name has no standing in nomenclature as of 2006-07-31. Acidovorax symbiont of Eisenia fetida (common brandling worm). From complete genome sequence.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGCCGAATATCATGCTGCACGACGACGAGGCCCGCATGGCCCTCGGTCGCGGGGTCGCC
AAACTGGCCAAAGCGGTGCGCGGCACGCTCGGCCCGCGCGGAATGAATGCGATCATCGAC
CGCCCGATTGGCACGCCGATCATCTCGCGCGATGGCGTCAGCATCGCCAACGAGATCGAG
CTGGAAGACCCGTTCGAAAACATCGGCGCGCAGGTGCTGCGCGAAGTCTCGAAGCAGACC
AATGAAGTCGCCGGCGACGGCACTACCACGGCCACCGTGCTGGCCGATGCGCTGGTCCAG
GACGGCCTTGCCAGTCTCGTGGCCGGCGCCAACCCCGTCGAGCTGGTTCAGGGCCTGGAG
ATCGCGGTGCAAGAGGTGATCGCCGCGCTCAGGCGCGCAGCGACACCGCTGCGCGGGGGC
AAAGAGGTGCGCGCGGTGGCCGTGGTCGCCGCCAATGACGAGGTCACCGGCGCGATAGTG
GCCGAAGCGCTCGAGCGGGTGGGGCCCGATGGCATCGTCGATGTCGAATTCGGCACGACG
GTCGAAACCCGTCTCGAAGTGGTCGACGGGATGGCGTTCGATCGCGGCTACCTCTCGCAC
CATATGGTCACGGACATCGAGAGAATGCAGGTGGTGCTGGACAACCCGCTGATCCTGATG
ACCGACCAGCGGCTGCAGTCGCCGGAAGAGGTGGCGGCGCTTCAGGCGCTGGCCGTGCAC
GGCAAACGCCCGCTGCTGATCATTGCGGAGGAGGTTGCCCCGGCCTGTGTCATGACCCTG
CTTGCGTGGCGGGACAAGGGCGGGATGCCGGTGGCGGCGATTCATCCGCCGGAATACGGG
CATTGGCGCAAGGCCATGCTCGAAGACATCGCCATCGTCACCGGCGGCCGGGTGATCGCC
CGCGATCTGGGCGGCAAGCTCGAAGCCACGGAACTGCGCGATCTCGGCAGCGCGCGGCAA
GTGCGTATCTCGTCGAACCAGACCATCATTACCGCTGGCGGCGGCGACCCGGCCGCCGTT
GCCGCGCGCCGTCAGCAGGTCGCGCGCCAGTATGAGATGGCCCCGGAAAATGTCGAACGC
GACAAATTTCAGGTGCGTATCGCCAAGTTGTCCGGCGGCACCGCGATGATCTTCGCCGGC
GGCGCCACGCCAGTCGAACAAAAGCGCCGGCTGCACTTGATCGAGGATGCGATCAATGCG
GCACGCGCGGCGATTGCCGAGGGTGTCGTGCCAGGTGGCGGAATGGCGCTGCTGCGCGTG
TCGGACGAACTCGAAAGCGTGATTGCGCGGACCCAGGGCAGTGTCCAGCAGGGGGTCAGG
CTGCTGCAGCGCGTGCTGACGAAACCGCTTTATCACATCGCGACCAATTGCGGTCTCGAC
GGCGCGGCGATCGTGTCCAGGGCGGTGCGCGCGAAACCGGGCCACGGTCTGGACGCGCGC
ACGGGCCAGTTCGTCAACCTGATGGAGGCGGGCATCATCGATCCGGTCAAGGTCAGTTAC
AGCGCAGTGCGCAACGCGGCTTCGGTTGCCGGCTTGATCCTGACCACCCAGACGCTGATT
GCCAAAAAGCCGGAAACGATCGACCCGACCGCTGGCCCGGCGCTTGGCGCCGGCGCCGAA
TTGCTCGGGCGGAAATAG
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MPNIMLHDDEARMALGRGVAKLAKAVRGTLGPRGMNAIIDRPIGTPIISRDGVSIANEIE
LEDPFENIGAQVLREVSKQTNEVAGDGTTTATVLADALVQDGLASLVAGANPVELVQGLE
IAVQEVIAALRRAATPLRGGKEVRAVAVVAANDEVTGAIVAEALERVGPDGIVDVEFGTT
VETRLEVVDGMAFDRGYLSHHMVTDIERMQVVLDNPLILMTDQRLQSPEEVAALQALAVH
GKRPLLIIAEEVAPACVMTLLAWRDKGGMPVAAIHPPEYGHWRKAMLEDIAIVTGGRVIA
RDLGGKLEATELRDLGSARQVRISSNQTIITAGGGDPAAVAARRQQVARQYEMAPENVER
DKFQVRIAKLSGGTAMIFAGGATPVEQKRRLHLIEDAINAARAAIAEGVVPGGGMALLRV
SDELESVIARTQGSVQQGVRLLQRVLTKPLYHIATNCGLDGAAIVSRAVRAKPGHGLDAR
TGQFVNLMEAGIIDPVKVSYSAVRNAASVAGLILTTQTLIAKKPETIDPTAGPALGAGAE
LLGRK
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCCACCGTGCTGGCCGATGCGCTGGTCCAGGACGGCCTTGCCAGTCTCGTGGCCGGCGCC
AACCCCGTCGAGCTGGTTCAGGGCCTGGAGATCGCGGTGCAAGAGGTGATCGCCGCGCTC
AGGCGCGCAGCGACACCGCTGCGCGGGGGCAAAGAGGTGCGCGCGGTGGCCGTGGTCGCC
GCCAATGACGAGGTCACCGGCGCGATAGTGGCCGAAGCGCTCGAGCGGGTGGGGCCCGAT
GGCATCGTCGATGTCGAATTCGGCACGACGGTCGAAACCCGTCTCGAAGTGGTCGACGGG
ATGGCGTTCGATCGCGGCTACCTCTCGCACCATATGGTCACGGACATCGAGAGAATGCAG
GTGGTGCTGGACAACCCGCTGATCCTGATGACCGACCAGCGGCTGCAGTCGCCGGAAGAG
GTGGCGGCGCTTCAGGCGCTGGCCGTGCACGGCAAACGCCCGCTGCTGATCATTGCGGAG
GAGGTTGCCCCGGCCTGTGTCATGACCCTGCTTGCGTGGCGGGACAAGGGCGGGATGCCG
GTGGCGGCGATT
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLADALVQDGLASLVAGANPVELVQGLEIAVQEVIAALRRAATPLRGGKEVRAVAVVA
ANDEVTGAIVAEALERVGPDGIVDVEFGTTVETRLEVVDGMAFDRGYLSHHMVTDIERMQ
VVLDNPLILMTDQRLQSPEEVAALQALAVHGKRPLLIIAEEVAPACVMTLLAWRDKGGMP
VAAI