RECORD DETAILS

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Chaperonin ID: b10341
Chaperonin Group: I
Deposit Date: 2007-07-09
Type: ref
Type strain?: yes
Genus: Shewanella
Species: sediminis
Strain: HAW-EB3
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_009831
Peptide Genbank Accession: YP_001472382
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms HAW-EB3 = DSM 17055 = NCIMB 14036. From whole genome sequence.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAGCTAAAGAAGTATTATTTGGTAACGATGCACGCGTAAAAATGCTTGCAGGCGTT
AACGTACTGGCAAACGCGGTTAAAGTAACTTTAGGCCCAAAGGGTCGTAACGTAGTACTG
GACAAGAGCTTCGGTGCTCCGCTTATCACTAAAGATGGTGTGTCAGTGGCCAAAGAGATC
GAACTTGAAGACAAGTTTGAAAACATGGGCGCACAGATGGTTAAAGAAGTTGCTTCTAAA
GCCAATGATGCAGCCGGTGACGGTACGACTACCGCTACCGTTCTTGCACAATCTATCGTT
ACTGAAGGTCTTAAAGCCGTTGCCGCTGGCATGAACCCAATGGATCTTAAACGCGGTATC
GATAAGGCAGTTATTGCTGCTGTTGCCGAGCTAAAGACACTTTCTCAAGAGTGTGCAGAC
ACTAACGCTATCGCTCAGGTTGGTACTATTTCGGCTAACTCTGATGAAACTATCGGTGAA
ATCATCGCAACAGCGATGGAAAAAGTCGGTAAAGAGGGTGTGATCACCGTTGAAGAAGGT
CAGGCACTGGAAAACGAGCTGGATGTAGTTGAAGGTATGCAGTTTGACCGCGGTTACCTC
TCTCCATACTTCATCAACAAGCCAGAAACCGGCAGTGTTGAACTGGAAAGCCCGTTCATC
CTGCTTGTTGACAAGAAAGTATCAAACATCCGTGAACTACTACCTATCCTTGAAGGTCTG
GCTAAAACCGGTAAGCCACTGCTTATCGTTGCCGAAGACGTTGAAGGCGAAGCACTAGCG
ACATTGGTTGTGAACAACATGCGTGGCATCGTTAAAGTTGCTGCGGTTAAAGCTCCAGGT
TTCGGTGACCGTCGTAAGGCTATGCTACAAGATATCGCCATCTTGACCGGCGGTACTGTT
ATCGCCGAAGAGATTGGTCTTGAGCTTGAGAAAGCGACACTGGAAGACTTAGGTACAGCT
AAGCGCGTTATCATCACTAAAGATGACACCACTATCATCGACGGTACCGGTGAGCAAGAT
CAGATCAAAGCACGTGTTGCACAGATCAAGATCCAGGCTGAAGAATCAACGTCAGATTAT
GACAAAGAGAAGCTTCAAGAGCGTATGGCTAAACTTGCTGGCGGCGTAGCTGTTATCAAG
GTTGGCGCAGCCACAGAAGTTGAGATGAAAGAGAAGAAAGCTCGCGTAGAAGATGCACTA
CACGCGACCCGCGCCGCTGTTGAAGAGGGTGTGGTAGCCGGTGGTGGTGTTGCTCTGGTA
CGTGTTGCCAGCAAAATCGCCGAAGTTGAAGTGATCAACGAAGACCAGAAGCACGGTGTG
GTTATCGCACTACGCGCTATGGAAGCACCACTTCGTCAAATCGCAGCTAACGCGGGTGAA
GAGGGTTCAGTTGTTGCTAACAACGTGAAGAACGGCTCTGGTAACTACGGTTACAACGCG
GGTAACGATACATACGGTGACATGCTTGAGATGGGTATCCTTGACCCAACTAAGGTAACC
CGTAGCGCGCTACAGTTCGCAGCGTCTATCGCTGGTCTTATGATCACAACCGAAGCAATG
GTTGGCGAAGTGAAAGAAGATGCTCCTGCTGGTGATATGGGCGGCATGGGTGGAATGGGT
GGTATGGGCGGTATGGGCGGCATGATGTGA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKTLSQECADTNAIAQVGTISANSDETIGEIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELESPFILLVDKKVSNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGTGEQDQIKARVAQIKIQAEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKIAEVEVINEDQKHGVVIALRAMEAPLRQIAANAGEEGSVVANNVKNGSGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVGEVKEDAPAGDMGGMGGMG
GMGGMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCTACCGTTCTTGCACAATCTATCGTTACTGAAGGTCTTAAAGCCGTTGCCGCTGGCATG
AACCCAATGGATCTTAAACGCGGTATCGATAAGGCAGTTATTGCTGCTGTTGCCGAGCTA
AAGACACTTTCTCAAGAGTGTGCAGACACTAACGCTATCGCTCAGGTTGGTACTATTTCG
GCTAACTCTGATGAAACTATCGGTGAAATCATCGCAACAGCGATGGAAAAAGTCGGTAAA
GAGGGTGTGATCACCGTTGAAGAAGGTCAGGCACTGGAAAACGAGCTGGATGTAGTTGAA
GGTATGCAGTTTGACCGCGGTTACCTCTCTCCATACTTCATCAACAAGCCAGAAACCGGC
AGTGTTGAACTGGAAAGCCCGTTCATCCTGCTTGTTGACAAGAAAGTATCAAACATCCGT
GAACTACTACCTATCCTTGAAGGTCTGGCTAAAACCGGTAAGCCACTGCTTATCGTTGCC
GAAGACGTTGAAGGCGAAGCACTAGCGACATTGGTTGTGAACAACATGCGTGGCATCGTT
AAAGTTGCTGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQSIVTEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKTLSQECADTNAIAQVGTIS
ANSDETIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETG
SVELESPFILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIV
KVAAV