RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close WindowChaperonin ID: | b10341 |
Chaperonin Group: | I |
Deposit Date: | 2007-07-09 |
Type: | ref |
Type strain?: | yes |
Genus: | Shewanella |
Species: | sediminis |
Strain: | HAW-EB3 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NC_009831 |
Peptide Genbank Accession: | YP_001472382 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Type strain synonyms HAW-EB3 = DSM 17055 = NCIMB 14036. From whole genome sequence. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGAAGTATTATTTGGTAACGATGCACGCGTAAAAATGCTTGCAGGCGTT AACGTACTGGCAAACGCGGTTAAAGTAACTTTAGGCCCAAAGGGTCGTAACGTAGTACTG GACAAGAGCTTCGGTGCTCCGCTTATCACTAAAGATGGTGTGTCAGTGGCCAAAGAGATC GAACTTGAAGACAAGTTTGAAAACATGGGCGCACAGATGGTTAAAGAAGTTGCTTCTAAA GCCAATGATGCAGCCGGTGACGGTACGACTACCGCTACCGTTCTTGCACAATCTATCGTT ACTGAAGGTCTTAAAGCCGTTGCCGCTGGCATGAACCCAATGGATCTTAAACGCGGTATC GATAAGGCAGTTATTGCTGCTGTTGCCGAGCTAAAGACACTTTCTCAAGAGTGTGCAGAC ACTAACGCTATCGCTCAGGTTGGTACTATTTCGGCTAACTCTGATGAAACTATCGGTGAA ATCATCGCAACAGCGATGGAAAAAGTCGGTAAAGAGGGTGTGATCACCGTTGAAGAAGGT CAGGCACTGGAAAACGAGCTGGATGTAGTTGAAGGTATGCAGTTTGACCGCGGTTACCTC TCTCCATACTTCATCAACAAGCCAGAAACCGGCAGTGTTGAACTGGAAAGCCCGTTCATC CTGCTTGTTGACAAGAAAGTATCAAACATCCGTGAACTACTACCTATCCTTGAAGGTCTG GCTAAAACCGGTAAGCCACTGCTTATCGTTGCCGAAGACGTTGAAGGCGAAGCACTAGCG ACATTGGTTGTGAACAACATGCGTGGCATCGTTAAAGTTGCTGCGGTTAAAGCTCCAGGT TTCGGTGACCGTCGTAAGGCTATGCTACAAGATATCGCCATCTTGACCGGCGGTACTGTT ATCGCCGAAGAGATTGGTCTTGAGCTTGAGAAAGCGACACTGGAAGACTTAGGTACAGCT AAGCGCGTTATCATCACTAAAGATGACACCACTATCATCGACGGTACCGGTGAGCAAGAT CAGATCAAAGCACGTGTTGCACAGATCAAGATCCAGGCTGAAGAATCAACGTCAGATTAT GACAAAGAGAAGCTTCAAGAGCGTATGGCTAAACTTGCTGGCGGCGTAGCTGTTATCAAG GTTGGCGCAGCCACAGAAGTTGAGATGAAAGAGAAGAAAGCTCGCGTAGAAGATGCACTA CACGCGACCCGCGCCGCTGTTGAAGAGGGTGTGGTAGCCGGTGGTGGTGTTGCTCTGGTA CGTGTTGCCAGCAAAATCGCCGAAGTTGAAGTGATCAACGAAGACCAGAAGCACGGTGTG GTTATCGCACTACGCGCTATGGAAGCACCACTTCGTCAAATCGCAGCTAACGCGGGTGAA GAGGGTTCAGTTGTTGCTAACAACGTGAAGAACGGCTCTGGTAACTACGGTTACAACGCG GGTAACGATACATACGGTGACATGCTTGAGATGGGTATCCTTGACCCAACTAAGGTAACC CGTAGCGCGCTACAGTTCGCAGCGTCTATCGCTGGTCTTATGATCACAACCGAAGCAATG GTTGGCGAAGTGAAAGAAGATGCTCCTGCTGGTGATATGGGCGGCATGGGTGGAATGGGT GGTATGGGCGGTATGGGCGGCATGATGTGA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI DKAVIAAVAELKTLSQECADTNAIAQVGTISANSDETIGEIIATAMEKVGKEGVITVEEG QALENELDVVEGMQFDRGYLSPYFINKPETGSVELESPFILLVDKKVSNIRELLPILEGL AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV IAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGTGEQDQIKARVAQIKIQAEESTSDY DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV RVASKIAEVEVINEDQKHGVVIALRAMEAPLRQIAANAGEEGSVVANNVKNGSGNYGYNA GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVGEVKEDAPAGDMGGMGGMG GMGGMGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTTCTTGCACAATCTATCGTTACTGAAGGTCTTAAAGCCGTTGCCGCTGGCATG AACCCAATGGATCTTAAACGCGGTATCGATAAGGCAGTTATTGCTGCTGTTGCCGAGCTA AAGACACTTTCTCAAGAGTGTGCAGACACTAACGCTATCGCTCAGGTTGGTACTATTTCG GCTAACTCTGATGAAACTATCGGTGAAATCATCGCAACAGCGATGGAAAAAGTCGGTAAA GAGGGTGTGATCACCGTTGAAGAAGGTCAGGCACTGGAAAACGAGCTGGATGTAGTTGAA GGTATGCAGTTTGACCGCGGTTACCTCTCTCCATACTTCATCAACAAGCCAGAAACCGGC AGTGTTGAACTGGAAAGCCCGTTCATCCTGCTTGTTGACAAGAAAGTATCAAACATCCGT GAACTACTACCTATCCTTGAAGGTCTGGCTAAAACCGGTAAGCCACTGCTTATCGTTGCC GAAGACGTTGAAGGCGAAGCACTAGCGACATTGGTTGTGAACAACATGCGTGGCATCGTT AAAGTTGCTGCGGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVTEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKTLSQECADTNAIAQVGTIS ANSDETIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETG SVELESPFILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIV KVAAV |