RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b10731 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-01-20 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Rickettsia |
| Species: | rickettsii |
| Strain: | str. Iowa |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_010263 |
| Peptide Genbank Accession: | YP_001650336 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From whole genome sequence of an avirulent strain. |
|
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAACAAAACTTATTAAACACGGCTCAAAAGCTCGTGAGCAAATGTTAGAAGGCATT GATATACTTGCAGATGCAGTAAAAGTTACTTTAGGTCCAAAAGGCAGAAATGTACTTATA GAGCAATCATTCGGTTCACCGAAAATTACAAAAGATGGTGTGACGGTTGCAAAATCGATC GAGTTAAAAGATAAAATTAGAAATGCGGGAGCTCAGCTATTAAAATCAGCTGCTACAAAA GCTGCAGAAGTAGCCGGTGATGGTACTACTACAGCTACGGTACTTGCTAGAGCTTTGGCT CGTGAGGGTAATAAGCTAGTAGCTGCCGGTTATAATCCTATGGATTTAAAGCGTGGTATG GATTTAGCGGTAAACGCAGTAGTAGAAGAAATTAAAAAATCCAGTAAAAAAATCAATAGC CAAGAGGAAATAGCACAAGTCGGTACTATCTCTTCAAACGGTGATAAGGAAATCGGTGAG AAAATTGCTAAGGCAATGGAGGAAGTCGGTAAAGAAGGCGTGATAACCGTTGAAGAAGCA AAGAATTTTAGCTTCGATGTTGAAGTAGTTAAAGGTATGATGTTTGATAGAGGTTATCTA TCACCGTATTTTGTAACGAATTCCGAGAAAATGGTTGCTGAGCTTGAAAATCCTTTCATC TTACTATTTGAGAAAAAATTATCAAATTTACAACCGATGTTACCTATACTTGAGGCTGTA GTACAATCACAACGTCCGCTATTAATTATTGCTGAGGATGTTGAGGGCGAAGCTCTTGCA ACGCTTGTAGTCAATAGATTACGTGGTGGTTTAAAAGTTGCGGCAGTAAAAGCTCCCGGT TTTGGCGATAGAAGAAAAGCAATGATGGAAGATATTGCTATCCTAACTAAAGGTGAGCTT ATTACTGAAGATTTAGGTATGAAGCTTGAAAATGTGAGTATTAAGAGTCTAGGGACAGCA AAAAGAGTAACAATTTCTAAAGAAAATACCGTAATTGTTGACGGTAACGGTGATAAGAAA AATATTGAAGATAGAGTATTACAAATTAAATCTCAAATAGCTGAAACTACTTCTGATTAT GATAAAGAAAAACTGCAAGAGCGTTTAGCTAAACTTTCCGGCGGTGTTGCCGTATTAAAG GTTGGCGGTGCTACGGAAGTTGAAGTGAAAGAGCGTAAAGATCGTGTTGAAGATGCACTT GCTGCTACAAGAGCGGCAGTTGAGGAAGGTGTTGTTGCCGGTGGCGGTGTAACATTACTT CATGCATCACAACCTTTAACAAAGCTTAAAGTAGAGAATAAGGATCAACAAGCTGGTATT GAAATAGTAATAGAAGCTTTAAAGGATCCGTTAAAACAGATTGTTGAAAATGCCGGTGAA AACGGTGGCGTAGTAGTTGGTAAATTACTAGAACATAAGGATAAAAATTATGGCTTTAAT GCTCAAGATATGCAATATGTCGATATGATTAAAGCAGGAATTATTGATCCGGCTAAAGTA GTGCGTACTGCACTTCAAGATGCTGCTTCCGTTGCTTCGTTAATTATTACCACGGAAACT TTAATTGTTGACGAACCTTCTGATAAGGCAGAGCCAATGCCAATGCGTGGCGGTATGGGA GGCATGGGCGGTATGGATTTCTAA |
|
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MATKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSI ELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGM DLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEA KNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENPFILLFEKKLSNLQPMLPILEAV VQSQRPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILTKGEL ITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDY DKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLL HASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFN AQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKAEPMPMRGGMG GMGGMDF |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACGGTACTTGCTAGAGCTTTGGCTCGTGAGGGTAATAAGCTAGTAGCTGCCGGTTAT AATCCTATGGATTTAAAGCGTGGTATGGATTTAGCGGTAAACGCAGTAGTAGAAGAAATT AAAAAATCCAGTAAAAAAATCAATAGCCAAGAGGAAATAGCACAAGTCGGTACTATCTCT TCAAACGGTGATAAGGAAATCGGTGAGAAAATTGCTAAGGCAATGGAGGAAGTCGGTAAA GAAGGCGTGATAACCGTTGAAGAAGCAAAGAATTTTAGCTTCGATGTTGAAGTAGTTAAA GGTATGATGTTTGATAGAGGTTATCTATCACCGTATTTTGTAACGAATTCCGAGAAAATG GTTGCTGAGCTTGAAAATCCTTTCATCTTACTATTTGAGAAAAAATTATCAAATTTACAA CCGATGTTACCTATACTTGAGGCTGTAGTACAATCACAACGTCCGCTATTAATTATTGCT GAGGATGTTGAGGGCGAAGCTCTTGCAACGCTTGTAGTCAATAGATTACGTGGTGGTTTA AAAGTTGCGGCAGTA |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLARALAREGNKLVAAGYNPMDLKRGMDLAVNAVVEEIKKSSKKINSQEEIAQVGTIS SNGDKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKM VAELENPFILLFEKKLSNLQPMLPILEAVVQSQRPLLIIAEDVEGEALATLVVNRLRGGL KVAAV |