RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b7455 |
| Chaperonin Group: | I |
| Deposit Date: | 2005-03-04 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Burkholderia |
| Species: | cenocepacia |
| Strain: | J2315 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia |
| Original ID: | LMG 16656 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_011000 |
| Peptide Genbank Accession: | YP_002232255 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | other |
| Notes: | Chromosome 1. Type strain synonyms LMG 16656 = ATCC BAA-245 = CCM 4899 = NCTC 13227. Sequence retrieved from Sanger Centre database - annotation is in progress. From chromosome 1 (of 3). One of three cpn60 genes. J2315 is a genomovar III strain of the ET12 lineage, and is the index strain for transmission of this strain among CF patients in the UK. B. cenocepacia J2315 has recently been renamed from B. cepacia J2315. Information about this change is published in Vandamme et al. (2003) Res Microbiol. 154 91-96. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGACGTCGTATTCGGCGATTCCGCCCGTTCGAAGATGGTCGAAGGCGTG AACATTCTCGCCAACGCAGTCAAGGTCACGCTGGGTCCGAAGGGCCGCAACGTCGTGCTC GAGCGCAGCTTCGGCGGCCCGACGGTCACCAAGGACGGTGTGTCGGTCGCGAAGGAAATC GAGCTGAAGGACAAGCTCCAGAACATGGGCGCGCAAATGGTCAAGGAAGTGGCTTCCAAG ACCAGCGACAACGCAGGCGACGGCACGACGACGGCAACCGTCCTCGCGCAATCGATCGTT CGCGAAGGCATGAAGTACGTCGCATCGGGCATGAACCCGATGGACCTGAAGCGCGGCATC GACAAGGCAGTCGCAGCGGCTGTCGAAGAGCTGAAGAAGATCAGCAAGCCGTGCACGACC AACAAGGAAATCGCACAAGTCGGCTCGATCTCGGCGAACAGCGATTCGTCGATCGGCGAT CGCATCGCTGAAGCGATGGACAAGGTCGGCAAGGAAGGCGTCATCACCGTCGAAGACGGC AAGTCGCTGGCCGACGAACTCGACGTCGTCGAAGGCATGCAATTCGACCGCGGCTACCTG TCGCCGTACTTCATCAACAACCCGGACAAGCAAGTCGCCGTCCTCGACAACCCGTTCGTG CTGCTGCACGACAAGAAGGTGTCGAACATCCGTGATCTGCTGCCGGTGCTCGAGCAAGTC GCGAAGGCTGGCCGTCCGCTGCTGATCATCGCAGAAGACGTCGAAGGCGAAGCGCTCGCG ACGCTGGTCGTCAACAACATCCGCGGCATCCTGAAGACCGTTGCGGTCAAGGCGCCGGGC TTCGGCGATCGTCGCAAGGCGATGCTGGAAGACATCGCGATCCTGACCGGCGGTCAAGTC ATCGCGGAAGAAACCGGCCTGACGCTCGAGAAGGCAACGCTGGCGGAACTGGGCCAGGCG AAGCGCATCGAAGTGGGCAAGGAAAACACGACGATCATCGACGGCGCAGGCGAAGCTGCA AGCATCGAAGCACGCGTGAAGCAAGTGCGCGCGCAAATCGAGGAAGCGACGTCGGACTAC GACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCAGGCGGCGTTGCAGTGATCAAG GTCGGTGCTGCGACCGAAGTCGAAATGAAGGAAAAGAAGGCCCGTGTCGAAGACGCACTG CACGCAACCCGCGCAGCTGTGGAAGAAGGCATCGTGGCAGGTGGCGGCGTTGCGCTGATC CGTGCACGCACCGCGATCGCAGGTCTGACCGGCGCGAACGCCGACCAGAACGCCGGCATC AAGATCGTGCTGCGCGCGATGGAAGAGCCGCTGCGCCAGATCGTCACGAACGGTGGCGAA GAAGCGAGCGTCGTGGTGGCGGCAGTTGCAGCAGGCAAGGGCAACTACGGCTACAACGCA GCAACGGGCGAGTACGTCGACATGGTGGAAGCCGGCGTCGTCGACCCGACCAAGGTCACG CGTACCGCGCTGCAGAACGCAGCTTCGGTGGCAGGCCTGCTGCTGACGACGGACGCAGCT GTCGCAGAACTGCCGAAGGAAGACGCA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI DKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGDRIAEAMDKVGKEGVITVEDG KSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLDNPFVLLHDKKVSNIRDLLPVLEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV IAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAASIEARVKQVRAQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALI RARTAIAGLTGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNA ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDA |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTCCTCGCGCAATCGATCGTTCGCGAAGGCATGAAGTACGTCGCATCGGGCATG AACCCGATGGACCTGAAGCGCGGCATCGACAAGGCAGTCGCAGCGGCTGTCGAAGAGCTG AAGAAGATCAGCAAGCCGTGCACGACCAACAAGGAAATCGCACAAGTCGGCTCGATCTCG GCGAACAGCGATTCGTCGATCGGCGATCGCATCGCTGAAGCGATGGACAAGGTCGGCAAG GAAGGCGTCATCACCGTCGAAGACGGCAAGTCGCTGGCCGACGAACTCGACGTCGTCGAA GGCATGCAATTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCCGGACAAGCAA GTCGCCGTCCTCGACAACCCGTTCGTGCTGCTGCACGACAAGAAGGTGTCGAACATCCGT GATCTGCTGCCGGTGCTCGAGCAAGTCGCGAAGGCTGGCCGTCCGCTGCTGATCATCGCA GAAGACGTCGAAGGCGAAGCGCTCGCGACGCTGGTCGTCAACAACATCCGCGGCATCCTG AAGACCGTTGCGGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGSIS ANSDSSIGDRIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQ VAVLDNPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGIL KTVAV |