RECORD DETAILS

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Chaperonin ID: b12680
Chaperonin Group: I
Deposit Date: 2008-11-17
Type: ref
Type strain?: yes
Genus: Shewanella
Species: piezotolerans
Strain: WP3
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_011566
Peptide Genbank Accession: YP_002309996
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms strain WP3 = CGMCC 1.6160 = JCM 13877.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGTCAGCTAAAGAAGTATTATTTGGAAACGACGCTCGCGTAAAAATGCTTGCCGGCGTA
AACGTACTCGCAAACGCAGTTAAAGTTACTTTAGGCCCAAAAGGTCGTAACGTTGTACTA
GACAAGAGCTTTGGTGCTCCACTTATCACTAAAGATGGTGTGTCTGTGGCGAAAGAGATC
GAACTTGAAGACAAGTTCGAGAACATGGGCGCACAAATGGTGAAAGAAGTTGCTTCTAAA
GCCAATGATGCAGCTGGTGACGGTACCACTACCGCAACAGTACTGGCTCAATCTATCGTA
ACTGAAGGTCTTAAAGCGGTTGCTGCTGGCATGAACCCAATGGATCTTAAGCGCGGCATC
GACAAAGCGGTTATCGCTGCAGTTGCAGAGCTTAAAAACCTTTCTCAAGAGTGTAGCGAC
ACTAAAGCTATCGCTCAGGTGGGTACTATCTCAGCTAACTCTGACGAAACTATCGGTGAA
ATCATTGCAACTGCGATGGAGCGTGTCGGTAAAGAAGGTGTTATCACTGTAGAAGAAGGC
CAAGCGCTAGAAAACGAATTAGACGTTGTTGAAGGTATGCAGTTTGACCGTGGTTACCTG
TCTCCTTACTTCATCAACAAGCCAGAGACTGGCAGTGTTGAACTAGAAACGCCATTTATC
CTATTGGTTGATAAGAAAGTATCAAACATTCGTGAATTGCTACCTATCCTTGAAGGTCTA
GCTAAAACAGGTAAGCCACTGCTTATCGTTGCAGAAGACGTTGAAGGCGAAGCATTAGCA
ACATTGGTTGTGAACAACATGCGTGGCATCGTTAAAGTTGCTGCTGTTAAAGCACCAGGT
TTTGGCGACCGTCGTAAAGCAATGCTACAAGATATCGCTATCCTAACTGGCGGTACAGTG
ATTGCTGAAGAGATTGGTCTAGAGCTTGAAAAAGCGACTCTAGAAGACCTAGGTACAGCT
AAGCGCGTTGTTATCACTAAAGATGACACCACGATTATTGACGGTACGGGTGAAGAGACT
CAAATCAAAGCACGTGTAGCTCAAATCAAGATCCAAGCTGAAGAGTCTACATCTGACTAC
GACAAAGAAAAACTTCAAGAGCGTATGGCTAAACTTGCTGGCGGCGTAGCCGTAATCAAG
GTTGGCGCAGCGACTGAAGTTGAAATGAAAGAGAAGAAAGCTCGCGTAGAAGACGCACTA
CACGCAACTCGCGCAGCGGTTGAAGAGGGTGTGGTTGCAGGCGGTGGTGTTGCACTAGTT
CGCGTAGCAAGCAAAATCGGTGAAGTTGAAGTTATCAACGAAGACCAGAAGCACGGTGTA
GTTATCGCACTACGTGCAATGGAAGCGCCACTACGTCAAATCGCAACTAACGCTGGCGAA
GAAGGTTCAGTTGTTGCTAACAACGTTAAGAACGGCACTGGTAACTACGGTTACAATGCT
GGTAACGACACATACGGTGACATGCTAGAGATGGGTATCCTAGACCCAACTAAAGTAACT
CGTAGCGCGCTACAGTTTGCTTCTTCAATTGCTGGTCTTATGATCACCACTGAAGCAATG
GTTGGCGAAATTCCACAAGATGCAGCTGGTGCGCCTGATATGGGCGGCATGGGTGGAATG
GGTGGAATGGGCGGTATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MSAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKNLSQECSDTKAIAQVGTISANSDETIGEIIATAMERVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELETPFILLVDKKVSNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEETQIKARVAQIKIQAEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKIGEVEVINEDQKHGVVIALRAMEAPLRQIATNAGEEGSVVANNVKNGTGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGEIPQDAAGAPDMGGMGGM
GGMGGMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCAACAGTACTGGCTCAATCTATCGTAACTGAAGGTCTTAAAGCGGTTGCTGCTGGCATG
AACCCAATGGATCTTAAGCGCGGCATCGACAAAGCGGTTATCGCTGCAGTTGCAGAGCTT
AAAAACCTTTCTCAAGAGTGTAGCGACACTAAAGCTATCGCTCAGGTGGGTACTATCTCA
GCTAACTCTGACGAAACTATCGGTGAAATCATTGCAACTGCGATGGAGCGTGTCGGTAAA
GAAGGTGTTATCACTGTAGAAGAAGGCCAAGCGCTAGAAAACGAATTAGACGTTGTTGAA
GGTATGCAGTTTGACCGTGGTTACCTGTCTCCTTACTTCATCAACAAGCCAGAGACTGGC
AGTGTTGAACTAGAAACGCCATTTATCCTATTGGTTGATAAGAAAGTATCAAACATTCGT
GAATTGCTACCTATCCTTGAAGGTCTAGCTAAAACAGGTAAGCCACTGCTTATCGTTGCA
GAAGACGTTGAAGGCGAAGCATTAGCAACATTGGTTGTGAACAACATGCGTGGCATCGTT
AAAGTTGCTGCTGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQSIVTEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKNLSQECSDTKAIAQVGTIS
ANSDETIGEIIATAMERVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETG
SVELETPFILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIV
KVAAV