RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close WindowChaperonin ID: | b12680 |
Chaperonin Group: | I |
Deposit Date: | 2008-11-17 |
Type: | ref |
Type strain?: | yes |
Genus: | Shewanella |
Species: | piezotolerans |
Strain: | WP3 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NC_011566 |
Peptide Genbank Accession: | YP_002309996 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Type strain synonyms strain WP3 = CGMCC 1.6160 = JCM 13877. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGTCAGCTAAAGAAGTATTATTTGGAAACGACGCTCGCGTAAAAATGCTTGCCGGCGTA AACGTACTCGCAAACGCAGTTAAAGTTACTTTAGGCCCAAAAGGTCGTAACGTTGTACTA GACAAGAGCTTTGGTGCTCCACTTATCACTAAAGATGGTGTGTCTGTGGCGAAAGAGATC GAACTTGAAGACAAGTTCGAGAACATGGGCGCACAAATGGTGAAAGAAGTTGCTTCTAAA GCCAATGATGCAGCTGGTGACGGTACCACTACCGCAACAGTACTGGCTCAATCTATCGTA ACTGAAGGTCTTAAAGCGGTTGCTGCTGGCATGAACCCAATGGATCTTAAGCGCGGCATC GACAAAGCGGTTATCGCTGCAGTTGCAGAGCTTAAAAACCTTTCTCAAGAGTGTAGCGAC ACTAAAGCTATCGCTCAGGTGGGTACTATCTCAGCTAACTCTGACGAAACTATCGGTGAA ATCATTGCAACTGCGATGGAGCGTGTCGGTAAAGAAGGTGTTATCACTGTAGAAGAAGGC CAAGCGCTAGAAAACGAATTAGACGTTGTTGAAGGTATGCAGTTTGACCGTGGTTACCTG TCTCCTTACTTCATCAACAAGCCAGAGACTGGCAGTGTTGAACTAGAAACGCCATTTATC CTATTGGTTGATAAGAAAGTATCAAACATTCGTGAATTGCTACCTATCCTTGAAGGTCTA GCTAAAACAGGTAAGCCACTGCTTATCGTTGCAGAAGACGTTGAAGGCGAAGCATTAGCA ACATTGGTTGTGAACAACATGCGTGGCATCGTTAAAGTTGCTGCTGTTAAAGCACCAGGT TTTGGCGACCGTCGTAAAGCAATGCTACAAGATATCGCTATCCTAACTGGCGGTACAGTG ATTGCTGAAGAGATTGGTCTAGAGCTTGAAAAAGCGACTCTAGAAGACCTAGGTACAGCT AAGCGCGTTGTTATCACTAAAGATGACACCACGATTATTGACGGTACGGGTGAAGAGACT CAAATCAAAGCACGTGTAGCTCAAATCAAGATCCAAGCTGAAGAGTCTACATCTGACTAC GACAAAGAAAAACTTCAAGAGCGTATGGCTAAACTTGCTGGCGGCGTAGCCGTAATCAAG GTTGGCGCAGCGACTGAAGTTGAAATGAAAGAGAAGAAAGCTCGCGTAGAAGACGCACTA CACGCAACTCGCGCAGCGGTTGAAGAGGGTGTGGTTGCAGGCGGTGGTGTTGCACTAGTT CGCGTAGCAAGCAAAATCGGTGAAGTTGAAGTTATCAACGAAGACCAGAAGCACGGTGTA GTTATCGCACTACGTGCAATGGAAGCGCCACTACGTCAAATCGCAACTAACGCTGGCGAA GAAGGTTCAGTTGTTGCTAACAACGTTAAGAACGGCACTGGTAACTACGGTTACAATGCT GGTAACGACACATACGGTGACATGCTAGAGATGGGTATCCTAGACCCAACTAAAGTAACT CGTAGCGCGCTACAGTTTGCTTCTTCAATTGCTGGTCTTATGATCACCACTGAAGCAATG GTTGGCGAAATTCCACAAGATGCAGCTGGTGCGCCTGATATGGGCGGCATGGGTGGAATG GGTGGAATGGGCGGTATGGGCGGCATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MSAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI DKAVIAAVAELKNLSQECSDTKAIAQVGTISANSDETIGEIIATAMERVGKEGVITVEEG QALENELDVVEGMQFDRGYLSPYFINKPETGSVELETPFILLVDKKVSNIRELLPILEGL AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV IAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEETQIKARVAQIKIQAEESTSDY DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV RVASKIGEVEVINEDQKHGVVIALRAMEAPLRQIATNAGEEGSVVANNVKNGTGNYGYNA GNDTYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGEIPQDAAGAPDMGGMGGM GGMGGMGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACAGTACTGGCTCAATCTATCGTAACTGAAGGTCTTAAAGCGGTTGCTGCTGGCATG AACCCAATGGATCTTAAGCGCGGCATCGACAAAGCGGTTATCGCTGCAGTTGCAGAGCTT AAAAACCTTTCTCAAGAGTGTAGCGACACTAAAGCTATCGCTCAGGTGGGTACTATCTCA GCTAACTCTGACGAAACTATCGGTGAAATCATTGCAACTGCGATGGAGCGTGTCGGTAAA GAAGGTGTTATCACTGTAGAAGAAGGCCAAGCGCTAGAAAACGAATTAGACGTTGTTGAA GGTATGCAGTTTGACCGTGGTTACCTGTCTCCTTACTTCATCAACAAGCCAGAGACTGGC AGTGTTGAACTAGAAACGCCATTTATCCTATTGGTTGATAAGAAAGTATCAAACATTCGT GAATTGCTACCTATCCTTGAAGGTCTAGCTAAAACAGGTAAGCCACTGCTTATCGTTGCA GAAGACGTTGAAGGCGAAGCATTAGCAACATTGGTTGTGAACAACATGCGTGGCATCGTT AAAGTTGCTGCTGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVTEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKNLSQECSDTKAIAQVGTIS ANSDETIGEIIATAMERVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETG SVELETPFILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIV KVAAV |