RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b14086 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-05-24 |
| Type: | cli |
| Type strain?: | no |
| Genus: | Vibrio |
| Species: | cholerae |
| Strain: | MJ-1236 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_012667 |
| Peptide Genbank Accession: | YP_002876262 |
| Best FASTA Match: | b19911 Vibrio cholerae HC-48B2 (see fasta results) |
| Date of FASTA search: | 2024-04-15 |
| FASTA identity %: | 100.000 |
| Best BLASTP Match: | b24078 Vibrio cholerae O1 str. 116059 (see blastp results) |
| Date of BLASTP search: | 2024-04-15 |
| BLASTP identity %: | 100.000 |
| Source: | Genbank |
| Notes: | Chromosome 2. Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAACACGTTCTGTTTTCAACCGACGCCAGACAGAAAATGCTTAGTGGCGTA AATTTACTGGCCAACGCCGTCAAAGTTACGCTCGGGCCCAAAGGTCGCCATGTTGTGCTC AATAAATCTTATGGTGCGCCAACCATCACTAAAGATGGCGTCTCTGTCGCCAAAGAGATT GAGCTCGCCGATAAATTCGAAAACATGGGCGCACAAATGCTCAAACAAGTGGCGTCCAAA GCCAACGACGAAGCGGGCGATGGCACTACCACAGCAACCGTGTTGGCCCAAGCGCTGATC AATGAAGGGATGAAGGCGGTCGCCGCTGGCATGAACCCCATGGATCTTAAGCGCGGTATC GACAAAGCAGTCTCCGCAGCGGTCGAGAAATTGCACCAACTGGCCAAACCTTGCAGTGAC ACCCAATCGATCACTCAAGTCGGTGCCATTTCCGCTAATAGCGATCACGCGATCGGTGAA ATCATCGCGCAAGCGATGGAGAAAGTTGGCCGCAATGGTGTGATCACGGTTGAAGAGGGA CAAGCTCTACAAAACGAGCTTTCGGTGGTTGAAGGTATGCAATTTGATCGCGGTTACCTT TCCCCTTACTTCATCAACCAACCCAAAGCGGGCTGTGTTGAGTTGGAGAATCCCTACGTC TTGCTAGTAGACAAGAAAATCAGCCACATTCGTGAACTGCTACCGATTTTAGAATCCGTG GCTAAAGCTTCCCGTTCGCTGCTGATCATTGCTGAAGATGTGGATGGCGATGCGCTTGCG ACATTAGTGGTTAACAGCATGCGTGGCATCATTAAAGTGGCAGCGGTGAAAGCGCCAGGC TTTGGTGAACAGCGCAAAGCAATGCTCGAGGACATCGCGGCCCTCACTGCTGGCCGAGTG ATTAGCGAGGAAATAGGTCTTGAGCTTGAAAAAGTGACGCTGGACGATCTGGGTAGCGCG AAAAAAGTCACCATCAATAAAGACAATACCACGATTGTCGATGGCGCTGCCGAGCCAAGT GCCCTCCAAGATCGCATCGCGCAGATCCAACATCAATTGGAACACACCACATCGCAATAC GATCGGGACAAATTGCAGCAACGCATTGCCAAACTCTCTGGTGGGGTTGCTGTGATCAAG ATTGGTGCGGCAACAGAAGTGGAGATGAAAGAGAAAAAAGATCGCGTGGATGATGCATTG CACGCCACTCGCGCCGCAGTGGAAGAAGGGATTGTGGCCGGCGGTGGTGTCGCTCTGCTG AAAATTGCCAACGAGCTCAGCAATTTACAAGGTGATAATGACGATCAAAATGTCGGCATT CGCATTGCGCTAAGAGCGATGGAAGAACCACTGCGTCAAATCGCCATCAACGCAGGGGAT GAAGCTTCAGTGATCGCAAATCAAGTCAAAACGGGCGATGAGCATTACGGCTACAACGCT GCCACCGGCCAATTTGGCAATATGTTAGAGATGGGCATTTTGGATCCTGCGAAGGTGACA CGCTCAGCGCTACAGTTTGCCGCAAGCATTGCTGGCTTGATGATCACCACCGAAGCCATG GTCAGCGAAGTAGACAAAGAGTCTGCGGCGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEI ELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGI DKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEG QALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESV AKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRV ISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQY DRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL KIANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQVKTGDEHYGYNA ATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDKESAA |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC GCTAATAGCGATCACGCGATCGGTGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTTTCGGTGGTTGAA GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT AAAGTGGCAGCGGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQALINEGMKAVAAGMNPMDLKRGIDKAVSAAVEKLHQLAKPCSDTQSITQVGAIS ANSDHAIGEIIAQAMEKVGRNGVITVEEGQALQNELSVVEGMQFDRGYLSPYFINQPKAG CVELENPYVLLVDKKISHIRELLPILESVAKASRSLLIIAEDVDGDALATLVVNSMRGII KVAAV |