RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b14085 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-05-24 |
| Type: | cli |
| Type strain?: | no |
| Genus: | Vibrio |
| Species: | cholerae |
| Strain: | MJ-1236 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_012668 |
| Peptide Genbank Accession: | YP_002877442 |
| Best FASTA Match: | b24069 Vibrio cholerae O1 str. AG-8040 (see fasta results) |
| Date of FASTA search: | 2024-04-22 |
| FASTA identity %: | 100.000 |
| Best BLASTP Match: | b30685 Vibrio metoecus OYP5D09 (see blastp results) |
| Date of BLASTP search: | 2024-04-22 |
| BLASTP identity %: | 100.000 |
| Source: | Genbank |
| Notes: | Chromosome 1. Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCTAAAGACGTACGTTTTGGTAATGACGCTCGTGTAAAAATGCTAGAAGGCGTA AACATTCTGGCCGATGCGGTAAAAGTGACCTTAGGTCCTAAAGGCCGTAACGTAGTTCTC GACAAATCTTTCGGTGCACCAACCATTACCAAAGATGGTGTATCAGTTGCGCGTGAAATT GAACTGGAAGACAAATTCCAGAACATGGGCGCACAAATGGTCAAAGAAGTCGCTTCTCAA GCCAACGACGCGGCGGGTGACGGTACAACCACAGCCACCGTACTGGCTCAAGCGATTGTG AACGAAGGCCTAAAAGCGGTCGCGGCGGGCATGAACCCAATGGATCTGAAGCGCGGGATC GATAAAGCGGTTATCGCTGCGGTAGAAGAGTTGAAAGCACTGTCTGTACCTTGTGCCGAT ACTAAAGCGATTGCCCAAGTAGGTACCATCTCTGCTAACTCAGACTCTAGCGTGGGCAAC ATCATTGCTGAAGCGATGGAAAAAGTGGGTCGCGATGGCGTGATCACCGTTGAAGAAGGC CAAGCGCTGCAAGACGAGCTGGATGTGGTTGAAGGTATGCAGTTTGACCGTGGCTACCTG TCACCGTACTTCATCAACAACCAAGAATCAGGCAGTGTAGAACTGGATAACCCATTCATC CTGCTGGTGGATAAGAAAATCTCTAACATCCGCGAACTGCTGCCAGTACTGGAAGGCGTA GCGAAAGCCTCTCGTCCACTGCTGATCGTGGCTGAAGATGTGGAAGGCGAAGCGCTGGCG ACTCTGGTTGTCAACAACATGCGCGGCATCGTGAAAGTGGCAGCGGTTAAAGCTCCTGGC TTTGGCGATCGTCGTAAAGCGATGCTGCAAGATATCGCGATCTTGACTGGCGGTGTTGTG ATCTCTGAAGAGATCGGTCTGGAGCTGGAAAAAGCGACTCTGGAAGACCTAGGCCAAGCG AAACGCGTTTCTATCACCAAAGAAAACTCAACCATCATCGATGGTGCTGGCGATCAAGCC GCGATCCAAGGTCGTGTTGCGCAGATCCGTCAACAAATCGAAGAAGCCACTTCTGACTAC GACAAAGAGAAACTGCAAGAGCGCGTAGCAAAACTGGCTGGCGGCGTTGCAGTAATCAAA GTGGGCGCAGCAACCGAAGTGGAAATGAAAGAGAAGAAAGATCGCGTAGAAGACGCGCTG CACGCGACTCGCGCAGCGGTAGAAGAAGGCGTTGTTGCGGGTGGTGGTGTAGCCCTGATC CGCGCAGCTTCTAAACTCTCTTCTCTGGTGGGTGACAACGAAGAGCAAAACGTGGGTATC CGTGTCGCACTACGTGCGATGGAAGCGCCACTGCGTCAAATCGTGAAAAACGCGGGTGAC GAAGAATCAGTGGTTGCCAACAATGTGCGTGCAGGCGAAGGTAACTACGGTTACAACGCG GCAACGGGCGTGTACGGTGACATGATCGAAATGGGTATTTTGGATCCAACCAAAGTAACC CGTTCTGCTCTGCAATTCGCAGCGTCTGTTGCGGGTCTGATGATCACCACTGAAGCGATG ATCACTGAGCTGCCGAAGAAAGATGCACCAGCAATGCCAGACATGGGCATGGGTGGCATG GGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMGMGGM GGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTACTGGCTCAAGCGATTGTGAACGAAGGCCTAAAAGCGGTCGCGGCGGGCATG AACCCAATGGATCTGAAGCGCGGGATCGATAAAGCGGTTATCGCTGCGGTAGAAGAGTTG AAAGCACTGTCTGTACCTTGTGCCGATACTAAAGCGATTGCCCAAGTAGGTACCATCTCT GCTAACTCAGACTCTAGCGTGGGCAACATCATTGCTGAAGCGATGGAAAAAGTGGGTCGC GATGGCGTGATCACCGTTGAAGAAGGCCAAGCGCTGCAAGACGAGCTGGATGTGGTTGAA GGTATGCAGTTTGACCGTGGCTACCTGTCACCGTACTTCATCAACAACCAAGAATCAGGC AGTGTAGAACTGGATAACCCATTCATCCTGCTGGTGGATAAGAAAATCTCTAACATCCGC GAACTGCTGCCAGTACTGGAAGGCGTAGCGAAAGCCTCTCGTCCACTGCTGATCGTGGCT GAAGATGTGGAAGGCGAAGCGCTGGCGACTCTGGTTGTCAACAACATGCGCGGCATCGTG AAAGTGGCAGCGGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKALSVPCADTKAIAQVGTIS ANSDSSVGNIIAEAMEKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQESG SVELDNPFILLVDKKISNIRELLPVLEGVAKASRPLLIVAEDVEGEALATLVVNNMRGIV KVAAV |