RECORD DETAILS

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Chaperonin ID: b12837
Chaperonin Group: I
Deposit Date: 2009-01-18
Type: ref
Type strain?: no
Genus: Variovorax
Species: paradoxus
Strain: S110
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_012791
Peptide Genbank Accession: YP_002943035
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: From whole genome sequence.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAGCAAAAGACGTAGTCTTCGGCGGTGAAGCCCGCGCACGCATGGTCGAGGGTGTC
AACATCCTCGCCAACGCCGTCAAGGTGACCCTGGGCCCCAAGGGCCGCAACGTGGTGCTC
GAGCGCTCGTTCGGCGCCCCCACCGTCACCAAGGACGGTGTGTCGGTCGCCAAGGAAATC
GAACTCAAGGACAAGCTCCAGAACATGGGCGCCCAGCTCGTGAAGGAAGTGGCCTCCAAG
ACCAGCGACAACGCCGGTGACGGCACCACCACCGCCACGGTGCTGGCCCAGGCCATCGTT
CGCGAAGGCTTCAAGTACGTGGCCGCCGGCATCAACCCGATGGACCTGAAGCGCGGCATC
GACAAGGCCGTGACGGCCCTGGTCGAAGAGCTGAAGAAGGCTTCCAAGCCCACCACCACG
TCGAAGGAAATCGCTCAAGTCGGCTCGATCTCGGCCAACAGCGACGAAACCATCGGCAAG
CTCATCGCTGACGCGATGGACAAGGTCGGCAAGGAAGGCGTGATCACCGTGGAAGACGGC
AAGTCGCTGGACAGCGAACTCGACGTCGTCGAAGGCATGCAGTTCGACCGCGGCTACCTG
TCGCCCTACTTCATCAACAACCCCGAGAAGCAATCGGCGCTGCTCGACAACCCCTTCGTG
CTGCTGTTCGACAAGAAGATCAGCAACATCCGCGACCTGCTCCCCACGCTGGAACAAGTC
GCCAAGGCTGGCCGTCCGCTCCTGATCATTGCCGAAGAAGTCGAAGGCGAAGCCCTGGCT
ACGCTGGTGGTGAACACGATCCGCGGCATCCTGAAGGTCGTGGCCGTGAAGGCACCTGGC
TTCGGCGACCGCCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACGGGCGGCAAGGTC
ATCGCTGAAGAAGTGGGCCTGACGCTCGAAAAGGTGACGCTGGCCGACCTGGGCCAAGCC
AAGCGCATCGAAGTGGGCAAGGAAAACACCATCATCATCGACGGTTCGGGCGCTGCGGCC
GACATCGAAGCCCGCGTGAAGCAAGTGCGCGTGCAGATCGAGGAAGCCACGAGCGACTAC
GACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCCGGCGGCGTTGCAGTGATCAAG
GTCGGCGCTGCCACCGAAGTCGAGATGAAGGAAAAGAAGGCACGCGTCGAAGACGCCCTG
CACGCCACCCGCGCTGCAGTGGAAGAAGGCGTTGTGGCCGGCGGCGGCGTGGCTCTGCTG
CGTGCCAAGCAAGCCGTGGGCGACAAGGTCAAGGGCGACAACGCCGACCAGGACGCCGGC
ATCAAGCTGGTGCTCAAGGCCATCGAAGCGCCCCTGCGCGAAATCGTGAACAACGCCGGC
GGCGAAGCCTCGGTGGTGGTGAACGCCGTGTTGGCCGGCAAGGGCAACTACGGCTTCAAT
GCCGCCAACGACACGTACGGCGACATGCTCGAGCTGGGCATCCTGGATCCGACCAAGGTG
ACCCGCACCGCGCTGCAGAACGCAGCATCGGTGGCTTCGCTGCTGCTGACGACCGAAGCC
ATGGTCGCCGACGCACCGAAGGAAGAAGCCGGTGCCGGCGGCGGCATGCCCGACATGGGC
GGCATGGGTGGTATGGGCGGCATGGGAATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGINPMDLKRGI
DKAVTALVEELKKASKPTTTSKEIAQVGSISANSDETIGKLIADAMDKVGKEGVITVEDG
KSLDSELDVVEGMQFDRGYLSPYFINNPEKQSALLDNPFVLLFDKKISNIRDLLPTLEQV
AKAGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLTLEKVTLADLGQAKRIEVGKENTIIIDGSGAAADIEARVKQVRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL
RAKQAVGDKVKGDNADQDAGIKLVLKAIEAPLREIVNNAGGEASVVVNAVLAGKGNYGFN
AANDTYGDMLELGILDPTKVTRTALQNAASVASLLLTTEAMVADAPKEEAGAGGGMPDMG
GMGGMGGMGM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCCACGGTGCTGGCCCAGGCCATCGTTCGCGAAGGCTTCAAGTACGTGGCCGCCGGCATC
AACCCGATGGACCTGAAGCGCGGCATCGACAAGGCCGTGACGGCCCTGGTCGAAGAGCTG
AAGAAGGCTTCCAAGCCCACCACCACGTCGAAGGAAATCGCTCAAGTCGGCTCGATCTCG
GCCAACAGCGACGAAACCATCGGCAAGCTCATCGCTGACGCGATGGACAAGGTCGGCAAG
GAAGGCGTGATCACCGTGGAAGACGGCAAGTCGCTGGACAGCGAACTCGACGTCGTCGAA
GGCATGCAGTTCGACCGCGGCTACCTGTCGCCCTACTTCATCAACAACCCCGAGAAGCAA
TCGGCGCTGCTCGACAACCCCTTCGTGCTGCTGTTCGACAAGAAGATCAGCAACATCCGC
GACCTGCTCCCCACGCTGGAACAAGTCGCCAAGGCTGGCCGTCCGCTCCTGATCATTGCC
GAAGAAGTCGAAGGCGAAGCCCTGGCTACGCTGGTGGTGAACACGATCCGCGGCATCCTG
AAGGTCGTGGCCGTG
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQAIVREGFKYVAAGINPMDLKRGIDKAVTALVEELKKASKPTTTSKEIAQVGSIS
ANSDETIGKLIADAMDKVGKEGVITVEDGKSLDSELDVVEGMQFDRGYLSPYFINNPEKQ
SALLDNPFVLLFDKKISNIRDLLPTLEQVAKAGRPLLIIAEEVEGEALATLVVNTIRGIL
KVVAV