RECORD DETAILS

For pacc NC_013124, see also: b13683

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Chaperonin ID: b13682
Chaperonin Group: I
Deposit Date: 2009-05-09
Type: ref
Type strain?: yes
Genus: Acidimicrobium
Species: ferrooxidans
Strain: -
Lineage: root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria (class); Acidimicrobidae; Acidimicrobiales; Acidimicrobineae; Acidimicrobiaceae; Acidimicrobium
Original ID: DSM 10331
CUTC ID: -
Nucleotide Genbank Accession: NC_013124
Peptide Genbank Accession: YP_003109085
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms strain ICP = DSM 10331 = JCM 15462 = NBRC 103882.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGCCGAAGATCTTGGAGTTCGACGAGTCCGCTCGTCGTGCGCTCGAGGCGGGCGTCAAC
AAGCTCGCCGACACCGTCAAGGTGACGCTCGGCCCGAAGGGCCGCAACGTCGTGCTCGCC
AAGAGCTTCGGCGCGCCCACGATCACCAACGACGGCGTCTCCATCGCTCGCGAGATCGAG
CTCGAGGACCCCTTCGAGAACATGGGTGCCCAGCTCGTCAAGGAGGTCGCCACCAAGACC
AACGACGTGGCTGGTGACGGCACCACGACCGCGACCGTCCTCGCGCAGGCGATGATCCGC
GAGGGGCTTCGCAACGTCGCGGCTGGTGCGAACCCGATGGCCCTCAAGCGCGGCATCGAG
CAGGCGGTCGCGGCCGCCGTCGAGTCCATCGCCGAGCAGGCCAAGCCGGTCGAGGGCCGC
AGTGACTTCGCCCAGGTCGCTGCCATCTCGGCAGCCGATCAGGCGGTCGGCGAGGTCCTC
GCCGAGGCCATCGACAAGGTCGGCAAGGACGGCACGGTCACCGTCGAGGAGTCGAACACC
TTCGGGCTCGAGCTCGAGTTCACCGAGGGCATGCAGTTCGACAAGGGCTACCTGTCGCCG
TACTTCGTGACCAACCAGGATCGCCAAGAGGCGGTGCTCGAGAACCCGTACATCCTCTTC
TACGCGACGAAGATCTCCTCGATCCACGAGCTGCTGCCCGTGCTCGAGAAGGTCATGCAG
GCCGGTCGGTCGTTGCTCATCGTCGCAGAGGACGTCGAGGGTGAGGCGCTCGCGACGTTG
GTCGTGAACAAGATCCGCGGCACCTTCACCTCGGTGGCGGTCAAGGCCCCCGGCTTCGGC
GAGCGCCGCAAGGCGATGCTGCAGGACATGGCGATCCTCACGGGTGGCCAGGTCATCTCG
GAAGAGGTCGGCCTCAAGCTCGAGAACGTCACGCTGGATCTGCTGGGCCAGGCTCGGCGC
ATCGAGGTGACGAAGGACGAGACGAAGATCATCGGCGGCGCCGGTCAGAAGGCGGACGTC
GATGGTCGGATCGCCCAGATCCGTCGTGAGATCGAGGAGACCGACTCCGACTGGGACCGT
GAGAAGCTCCAGGAGCGCCTCGCCAAGCTCGCCGGTGGTGTCGCGGTCGTCAAGGTCGGC
GCCGCGACCGAGGTCGAGCTCAAGGAGAAGAAGCACCGCATCGAGGATGCGCTCTCCGCG
ACTCGTGCAGCCATCGAGGAGGGGATCGTTGCCGGCGGTGGCACGGCGCTCATTCGCGCT
CGGGCGCGCGTGAACGACGTGGTCGCCAAGCTCGAGGGTGACGAGGCGACGGGCGCGACC
ATCGTGGCTCGTTCGCTCGAGGAGCCGCTCAAGTGGATCGCCTACAACGCGGGCATGGAA
GGCCCGGTGGTGGTCCAGACGGTCGAGCACGAGTCGGGCAACGTTGGCCTGAACGCTCGT
ACCGGTGTGTACGAGGACCTCGTGAAGGCCGGCGTGATCGACCCGGCGAAGGTGACGCGC
TCTGCGCTGCAGAACGCAGCGTCCATCGCGGCCCTGCTGCTCACGACCGAGGCACTCGTG
GCCGACAAGCCCGAGGAGCCGGGTCAGGCGGCGGCCGGCGCTGGCGCAGCCGGCGGCATG
GGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MPKILEFDESARRALEAGVNKLADTVKVTLGPKGRNVVLAKSFGAPTITNDGVSIAREIE
LEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLRNVAAGANPMALKRGIE
QAVAAAVESIAEQAKPVEGRSDFAQVAAISAADQAVGEVLAEAIDKVGKDGTVTVEESNT
FGLELEFTEGMQFDKGYLSPYFVTNQDRQEAVLENPYILFYATKISSIHELLPVLEKVMQ
AGRSLLIVAEDVEGEALATLVVNKIRGTFTSVAVKAPGFGERRKAMLQDMAILTGGQVIS
EEVGLKLENVTLDLLGQARRIEVTKDETKIIGGAGQKADVDGRIAQIRREIEETDSDWDR
EKLQERLAKLAGGVAVVKVGAATEVELKEKKHRIEDALSATRAAIEEGIVAGGGTALIRA
RARVNDVVAKLEGDEATGATIVARSLEEPLKWIAYNAGMEGPVVVQTVEHESGNVGLNAR
TGVYEDLVKAGVIDPAKVTRSALQNAASIAALLLTTEALVADKPEEPGQAAAGAGAAGGM
GGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCGACCGTCCTCGCGCAGGCGATGATCCGCGAGGGGCTTCGCAACGTCGCGGCTGGTGCG
AACCCGATGGCCCTCAAGCGCGGCATCGAGCAGGCGGTCGCGGCCGCCGTCGAGTCCATC
GCCGAGCAGGCCAAGCCGGTCGAGGGCCGCAGTGACTTCGCCCAGGTCGCTGCCATCTCG
GCAGCCGATCAGGCGGTCGGCGAGGTCCTCGCCGAGGCCATCGACAAGGTCGGCAAGGAC
GGCACGGTCACCGTCGAGGAGTCGAACACCTTCGGGCTCGAGCTCGAGTTCACCGAGGGC
ATGCAGTTCGACAAGGGCTACCTGTCGCCGTACTTCGTGACCAACCAGGATCGCCAAGAG
GCGGTGCTCGAGAACCCGTACATCCTCTTCTACGCGACGAAGATCTCCTCGATCCACGAG
CTGCTGCCCGTGCTCGAGAAGGTCATGCAGGCCGGTCGGTCGTTGCTCATCGTCGCAGAG
GACGTCGAGGGTGAGGCGCTCGCGACGTTGGTCGTGAACAAGATCCGCGGCACCTTCACC
TCGGTGGCGGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQAMIREGLRNVAAGANPMALKRGIEQAVAAAVESIAEQAKPVEGRSDFAQVAAIS
AADQAVGEVLAEAIDKVGKDGTVTVEESNTFGLELEFTEGMQFDKGYLSPYFVTNQDRQE
AVLENPYILFYATKISSIHELLPVLEKVMQAGRSLLIVAEDVEGEALATLVVNKIRGTFT
SVAV