RECORD DETAILS
For pacc NC_014323, see also: b17501
Add Record To Cart - Printer-friendly version - Close WindowChaperonin ID: | b17500 |
Chaperonin Group: | I |
Deposit Date: | 2010-07-23 |
Type: | ref |
Type strain?: | no |
Genus: | Herbaspirillum |
Species: | seropedicae |
Strain: | SmR1 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NC_014323 |
Peptide Genbank Accession: | YP_003774421 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | - |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAGCAAGTTATTTTCGGCGATGAAGCACGCGCCAAGGTCGTCAACGGCGTC AACATCCTGGCCAACGCAGTCAAGGTCACCCTGGGTCCCAAGGGCCGCAACGTCGTGCTG GAGCGTAGCTTCGGCGCCCCGACCGTGACCAAGGACGGCGTGTCCGTCGCCAAGGAAATC GAACTGAAGGACAAGCTGGAAAACATGGGCGCCCAGCTGGTCAAGGAAGTCGCTTCCAAG ACCTCCGACAACGCCGGTGACGGTACCACCACCGCTACCGTGCTGGCCCAAGCCATCGTG CGCGAAGGCTTCAAGTACGTCGCCGCCGGCTTCAACCCGACCGACCTGAAGCGCGGTATC GACAAGGCCGTCACCGCCATCGTCGGTGAAGTCAAGAACCTGGCCAAGCCCACCACCACC TCCAAGGAAATCGCTCAAGTCGGCTCGATCTCGGCCAACTCCGACGCGGACATCGGCGAC ATCATCGCCAAGGCCATGGAAAAGGTCGGCAAGGAAGGCGTCATCACCGTGGAAGACGGC AAGTCGCTGGAAAACGAGCTGGACATCGTCGAAGGTATGCAATTCGACCGCGGCTACCTG TCGCCGTACTTCATCAACAACCAAGAGAAGCAGATCGTCGCTCTGGACAATCCCTTCATC CTGCTGTTCGACAAGAAGATCTCCAACATCCGTGACCTGCTGCCGGTGCTGGAACAAGTC GCCAAGGCTGGTCGTCCGCTGCTGATCGTGGCTGAAGACGTCGAAGGCGAAGCCCTGGCT ACCCTGGTGGTCAACAACATCCGTGGCATCCTGAAGACCGCTGCCGTCAAGGCCCCTGGC TTCGGCGACCGCCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACCGGCGGCCAAGTG ATCGCCGAAGAAGTCGGCCTGACCCTGGAAAAGGCTACCCTGGCTGAACTGGGCCAAGCC AAGCGCGTTGAAATCGGCAAGGAAAACACCACCATCATCGACGGCAACGGCGAAGCCGCT GGCATCGAGGCACGCGTGGCCATGATCCGTACCCAGATCGGCGAAGCGACCTCCGACTAC GACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCTGGCGGTGTTGCACTGATCAAG GTTGGCGCTGCCACCGAAGTCGAAATGAAGGAAAAGAAGGCCCGCGTCGAAGACGCCCTG CACGCTACCCGCGCTGCTGTTGAAGAAGGCGTCGTGCCTGGCGGTGGCGTGGCCCTGCTG CGCGCTCGCGCCAACGTCAAGGACCTGAAGGGCGACAATCCTGACCAGGAAGCCGGTATC AAGATCGTGCTGCGCGCCATCGAAGAGCCGCTGCGCCAGATCGTCTTCAACGCCGGCGAT GAGCCGTCGGTGGTGGTGAACAAGGTGCTGGAAGGTTCGGGCAACTTCGGCTACAACGCT TCCAACGGCACCTACGGTGACCTGGTGGAACTGGGCGTGCTGGATCCGGCCAAGGTGACC CGTTCGGCCCTGCAGAACGCTGCCTCCGTGGCCAGCCTGATCCTGACCACCGACGCCCTG GTGGCCGAAGTGGCGGAAGACAAGCCGGCCGGCATGCCTGGCGGCATGGGTGGTATGGGC GGCATGGGTGGCATGGACGGCATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKQVIFGDEARAKVVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI DKAVTAIVGEVKNLAKPTTTSKEIAQVGSISANSDADIGDIIAKAMEKVGKEGVITVEDG KSLENELDIVEGMQFDRGYLSPYFINNQEKQIVALDNPFILLFDKKISNIRDLLPVLEQV AKAGRPLLIVAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV IAEEVGLTLEKATLAELGQAKRVEIGKENTTIIDGNGEAAGIEARVAMIRTQIGEATSDY DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL RARANVKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNKVLEGSGNFGYNA SNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAEVAEDKPAGMPGGMGGMG GMGGMDGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTGCTGGCCCAAGCCATCGTGCGCGAAGGCTTCAAGTACGTCGCCGCCGGCTTC AACCCGACCGACCTGAAGCGCGGTATCGACAAGGCCGTCACCGCCATCGTCGGTGAAGTC AAGAACCTGGCCAAGCCCACCACCACCTCCAAGGAAATCGCTCAAGTCGGCTCGATCTCG GCCAACTCCGACGCGGACATCGGCGACATCATCGCCAAGGCCATGGAAAAGGTCGGCAAG GAAGGCGTCATCACCGTGGAAGACGGCAAGTCGCTGGAAAACGAGCTGGACATCGTCGAA GGTATGCAATTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCAAGAGAAGCAG ATCGTCGCTCTGGACAATCCCTTCATCCTGCTGTTCGACAAGAAGATCTCCAACATCCGT GACCTGCTGCCGGTGCTGGAACAAGTCGCCAAGGCTGGTCGTCCGCTGCTGATCGTGGCT GAAGACGTCGAAGGCGAAGCCCTGGCTACCCTGGTGGTCAACAACATCCGTGGCATCCTG AAGACCGCTGCCGTC |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGFKYVAAGFNPTDLKRGIDKAVTAIVGEVKNLAKPTTTSKEIAQVGSIS ANSDADIGDIIAKAMEKVGKEGVITVEDGKSLENELDIVEGMQFDRGYLSPYFINNQEKQ IVALDNPFILLFDKKISNIRDLLPVLEQVAKAGRPLLIVAEDVEGEALATLVVNNIRGIL KTAAV |