RECORD DETAILS

For pacc NC_014323, see also: b17501

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Chaperonin ID: b17500
Chaperonin Group: I
Deposit Date: 2010-07-23
Type: ref
Type strain?: no
Genus: Herbaspirillum
Species: seropedicae
Strain: SmR1
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_014323
Peptide Genbank Accession: YP_003774421
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: -
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAGCAAAGCAAGTTATTTTCGGCGATGAAGCACGCGCCAAGGTCGTCAACGGCGTC
AACATCCTGGCCAACGCAGTCAAGGTCACCCTGGGTCCCAAGGGCCGCAACGTCGTGCTG
GAGCGTAGCTTCGGCGCCCCGACCGTGACCAAGGACGGCGTGTCCGTCGCCAAGGAAATC
GAACTGAAGGACAAGCTGGAAAACATGGGCGCCCAGCTGGTCAAGGAAGTCGCTTCCAAG
ACCTCCGACAACGCCGGTGACGGTACCACCACCGCTACCGTGCTGGCCCAAGCCATCGTG
CGCGAAGGCTTCAAGTACGTCGCCGCCGGCTTCAACCCGACCGACCTGAAGCGCGGTATC
GACAAGGCCGTCACCGCCATCGTCGGTGAAGTCAAGAACCTGGCCAAGCCCACCACCACC
TCCAAGGAAATCGCTCAAGTCGGCTCGATCTCGGCCAACTCCGACGCGGACATCGGCGAC
ATCATCGCCAAGGCCATGGAAAAGGTCGGCAAGGAAGGCGTCATCACCGTGGAAGACGGC
AAGTCGCTGGAAAACGAGCTGGACATCGTCGAAGGTATGCAATTCGACCGCGGCTACCTG
TCGCCGTACTTCATCAACAACCAAGAGAAGCAGATCGTCGCTCTGGACAATCCCTTCATC
CTGCTGTTCGACAAGAAGATCTCCAACATCCGTGACCTGCTGCCGGTGCTGGAACAAGTC
GCCAAGGCTGGTCGTCCGCTGCTGATCGTGGCTGAAGACGTCGAAGGCGAAGCCCTGGCT
ACCCTGGTGGTCAACAACATCCGTGGCATCCTGAAGACCGCTGCCGTCAAGGCCCCTGGC
TTCGGCGACCGCCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACCGGCGGCCAAGTG
ATCGCCGAAGAAGTCGGCCTGACCCTGGAAAAGGCTACCCTGGCTGAACTGGGCCAAGCC
AAGCGCGTTGAAATCGGCAAGGAAAACACCACCATCATCGACGGCAACGGCGAAGCCGCT
GGCATCGAGGCACGCGTGGCCATGATCCGTACCCAGATCGGCGAAGCGACCTCCGACTAC
GACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCTGGCGGTGTTGCACTGATCAAG
GTTGGCGCTGCCACCGAAGTCGAAATGAAGGAAAAGAAGGCCCGCGTCGAAGACGCCCTG
CACGCTACCCGCGCTGCTGTTGAAGAAGGCGTCGTGCCTGGCGGTGGCGTGGCCCTGCTG
CGCGCTCGCGCCAACGTCAAGGACCTGAAGGGCGACAATCCTGACCAGGAAGCCGGTATC
AAGATCGTGCTGCGCGCCATCGAAGAGCCGCTGCGCCAGATCGTCTTCAACGCCGGCGAT
GAGCCGTCGGTGGTGGTGAACAAGGTGCTGGAAGGTTCGGGCAACTTCGGCTACAACGCT
TCCAACGGCACCTACGGTGACCTGGTGGAACTGGGCGTGCTGGATCCGGCCAAGGTGACC
CGTTCGGCCCTGCAGAACGCTGCCTCCGTGGCCAGCCTGATCCTGACCACCGACGCCCTG
GTGGCCGAAGTGGCGGAAGACAAGCCGGCCGGCATGCCTGGCGGCATGGGTGGTATGGGC
GGCATGGGTGGCATGGACGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKQVIFGDEARAKVVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI
DKAVTAIVGEVKNLAKPTTTSKEIAQVGSISANSDADIGDIIAKAMEKVGKEGVITVEDG
KSLENELDIVEGMQFDRGYLSPYFINNQEKQIVALDNPFILLFDKKISNIRDLLPVLEQV
AKAGRPLLIVAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEVGLTLEKATLAELGQAKRVEIGKENTTIIDGNGEAAGIEARVAMIRTQIGEATSDY
DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RARANVKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNKVLEGSGNFGYNA
SNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAEVAEDKPAGMPGGMGGMG
GMGGMDGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCTACCGTGCTGGCCCAAGCCATCGTGCGCGAAGGCTTCAAGTACGTCGCCGCCGGCTTC
AACCCGACCGACCTGAAGCGCGGTATCGACAAGGCCGTCACCGCCATCGTCGGTGAAGTC
AAGAACCTGGCCAAGCCCACCACCACCTCCAAGGAAATCGCTCAAGTCGGCTCGATCTCG
GCCAACTCCGACGCGGACATCGGCGACATCATCGCCAAGGCCATGGAAAAGGTCGGCAAG
GAAGGCGTCATCACCGTGGAAGACGGCAAGTCGCTGGAAAACGAGCTGGACATCGTCGAA
GGTATGCAATTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCAAGAGAAGCAG
ATCGTCGCTCTGGACAATCCCTTCATCCTGCTGTTCGACAAGAAGATCTCCAACATCCGT
GACCTGCTGCCGGTGCTGGAACAAGTCGCCAAGGCTGGTCGTCCGCTGCTGATCGTGGCT
GAAGACGTCGAAGGCGAAGCCCTGGCTACCCTGGTGGTCAACAACATCCGTGGCATCCTG
AAGACCGCTGCCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQAIVREGFKYVAAGFNPTDLKRGIDKAVTAIVGEVKNLAKPTTTSKEIAQVGSIS
ANSDADIGDIIAKAMEKVGKEGVITVEDGKSLENELDIVEGMQFDRGYLSPYFINNQEKQ
IVALDNPFILLFDKKISNIRDLLPVLEQVAKAGRPLLIVAEDVEGEALATLVVNNIRGIL
KTAAV