RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b18182 |
| Chaperonin Group: | I |
| Deposit Date: | 2010-12-12 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Pedobacter |
| Species: | saltans |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Sphingobacteria; Sphingobacteriales; Sphingobacteriaceae; Pedobacter |
| Original ID: | DSM 12145 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_015177 |
| Peptide Genbank Accession: | YP_004275931 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms DSM 12145 = CCUG 39354 = CIP 105500 = JCM 21818 = LMG 10337 = NBRC 100064. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAACAAATTAAATATAATGTTGAAGCTAGAGATGCTTTAAAAAACGGAGTTGAT AAATTAGCGAATGCTGTAAAAGTTACGTTAGGTCCAAAAGGTAGAAACGTAATTATTGAC AAAAAATTCGGATCGCCAGTAGTTACCAAAGACGGTGTTTCTGTTGCTAAAGAAATCGAA TTGAAAGATGCTTTAGAGAACATGGGAGCACAAATGGTAAAAGAAGTAGCTTCTAAAACT GCTGATATTGCAGGTGACGGAACAACTACTGCAACTGTATTAGCGCAAGCTATTATTACA GCTGGTATTAAAAACGTTGCTGCGGGTGCAAATCCGATGGATTTAAAGCGTGGTATTGAT AAAGCAGTTGCCGTTGTTGTAGAAAATTTACAATCTCAATCTCAAGCGGTAGGCGAAGAT AATAACAAAATCAAGCAAGTTGCTTCTATCTCGGCAAATAACGATGACGTTATCGGGTCT CTAATTGCGGAAGCAATGAGTAAAGTAGGTAAGGACGGTGTAATTACTGTTGAAGAGGCA AAGGGTACTGAAACTGAAGTTAAAACGGTAGAAGGTATGCAATTCGACAGAGGTTATCTT TCTCCTTACTTCGTAACCAATGCCGATAAAATGGAAGTAGAATTAGAAAATCCTTATATT TTAATCTACGACAAAAAAATCAGCAATATGAAAGAATTGTTGCCGGTTTTAGAAAAACAA GTTCAAACAGGAAAGCCTCTTTTAATTATTGCAGAAGATTTAGACGGTGAAGCATTGGCT ACATTAGTAGTTAACAAAATCCGTGGTTCTCTGAAAGTAGCGGCTGTTAAAGCGCCAGGT TTTGGTGATAGAAGAAAAGCTATGTTAGAAGACATCGCTATCTTAACAGGAGGTACTGTA ATTTCGGAAGAAAGAGGTTTCAAATTAGAAAATGCTGATCTTTCTTTCTTAGGACAAGCT GAAAAGGTTGTTGTAGATAAAGACAATACAATCTTAGTTAATGGCGCTGGTAATGCAGAT GATATAAAAGCTCGCGTTAATCAAATCAAAGCTCAGATTGAAACAACTACTTCTGATTAC GACAGAGAGAAGTTACAAGAGCGTTTAGCTAAATTAGCTGGCGGTGTAGCGGTACTTTAT GTTGGTGCAGCAACAGAGGTAGAAATGAAAGAGAAAAAAGATCGCGTTGATGATGCTTTA CATGCAACAAGAGCTGCAGTAGAAGAAGGTATTGTTGCTGGTGGAGGTGTTGCTTTCATC AGAGCAGTTGCTTCGTTAGAAGATTTAAAAGGAGAGAACGAAGATGAGACTACTGGTATC AACATTATCAAAAGAGCTATCGAAGAACCTTTACGTCAAATCTGCGAAAATGCAGGTGTT GAAGGATCTATCGTTGTTCATAATGTAAAACAAGGTTCTGCAGATTACGGTTATAACGCT CGCAGAGATGTTTACGAAAACTTAATCACAGCAGGTGTTATTGATCCAACTAAAGTTTCT CGTGTAGCTTTAGAGAATGCAGCATCAATCGCTTCTATGTTATTAACAACAGAATGTGTA CTAGCAGATGAGCCAGAAGAAGGTGGTTCTGCAGCAGCAATGCCTCCAATGGGTGGTGGC ATGGGCGGAATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKQIKYNVEARDALKNGVDKLANAVKVTLGPKGRNVIIDKKFGSPVVTKDGVSVAKEIE LKDALENMGAQMVKEVASKTADIAGDGTTTATVLAQAIITAGIKNVAAGANPMDLKRGID KAVAVVVENLQSQSQAVGEDNNKIKQVASISANNDDVIGSLIAEAMSKVGKDGVITVEEA KGTETEVKTVEGMQFDRGYLSPYFVTNADKMEVELENPYILIYDKKISNMKELLPVLEKQ VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVAAVKAPGFGDRRKAMLEDIAILTGGTV ISEERGFKLENADLSFLGQAEKVVVDKDNTILVNGAGNADDIKARVNQIKAQIETTTSDY DREKLQERLAKLAGGVAVLYVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI RAVASLEDLKGENEDETTGINIIKRAIEEPLRQICENAGVEGSIVVHNVKQGSADYGYNA RRDVYENLITAGVIDPTKVSRVALENAASIASMLLTTECVLADEPEEGGSAAAMPPMGGG MGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTATTAGCGCAAGCTATTATTACAGCTGGTATTAAAAACGTTGCTGCGGGTGCA AATCCGATGGATTTAAAGCGTGGTATTGATAAAGCAGTTGCCGTTGTTGTAGAAAATTTA CAATCTCAATCTCAAGCGGTAGGCGAAGATAATAACAAAATCAAGCAAGTTGCTTCTATC TCGGCAAATAACGATGACGTTATCGGGTCTCTAATTGCGGAAGCAATGAGTAAAGTAGGT AAGGACGGTGTAATTACTGTTGAAGAGGCAAAGGGTACTGAAACTGAAGTTAAAACGGTA GAAGGTATGCAATTCGACAGAGGTTATCTTTCTCCTTACTTCGTAACCAATGCCGATAAA ATGGAAGTAGAATTAGAAAATCCTTATATTTTAATCTACGACAAAAAAATCAGCAATATG AAAGAATTGTTGCCGGTTTTAGAAAAACAAGTTCAAACAGGAAAGCCTCTTTTAATTATT GCAGAAGATTTAGACGGTGAAGCATTGGCTACATTAGTAGTTAACAAAATCCGTGGTTCT CTGAAAGTAGCGGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIITAGIKNVAAGANPMDLKRGIDKAVAVVVENLQSQSQAVGEDNNKIKQVASI SANNDDVIGSLIAEAMSKVGKDGVITVEEAKGTETEVKTVEGMQFDRGYLSPYFVTNADK MEVELENPYILIYDKKISNMKELLPVLEKQVQTGKPLLIIAEDLDGEALATLVVNKIRGS LKVAAV |