RECORD DETAILS
For pacc NC_018868, see also: b21522
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b21521 |
| Chaperonin Group: | I |
| Deposit Date: | 2012-11-03 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Simiduia |
| Species: | agarivorans |
| Strain: | SA1 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; unclassified Gammaproteobacteria; Simiduia |
| Original ID: | DSM 21679 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_018868 |
| Peptide Genbank Accession: | AFU98113 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms strain SA1 = BCRC 17597 = JCM 13881. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGAGTGCAAAAGCCATTTTATTTTCTAAAGACGCACGCGAGCGCATGTTGACGGGCGTG AATATTCTGGCGGATGCAGTAAAGGCCACCCTTGGCCCTAAAGGTCGCAACGTGATTCTG GATAAGAGCTACGGTGCGCCGCGGGTGACTAAGGACGGAGTCTCCGTTGCCAAGGAAATA ACCCTGGCCGACAAGTTCGAGAACATGGGTGCCCAGATGGTAAAAGAGGTGGCTTCAAAA ACCGCTGATATCGCAGGCGACGGTACCACCACCGCAACCGTGCTGGCGCAGGCATTGGTG CGCGAGGGGCACAAGGCGATTGCCTCCGGTATTAATCCCATGGACCTGAAGCGTGGGATT GACGCGGCGGTTGCAGCTGCTATCGAACACCTGAAACCTGTGTCCAAACCCTGCAACGAT ACCAAGTCTATTCGCCAGGTGGCGACGGTGTCTGCGAACTGGAACGAAGACATTGGCGAA ATACTGGCGCAGGCCATGGATAAAGTGGGCCGCGACGGGGTGATTACCGTTGAAGAGGGT AAGTCGCTGCAGAACGAACTCGATGTGGTCGAGGGTATGCAGTTTGATCGAGGCTATCTG TCGCCTTACTTCATTACCAATCAGGATAAAATGCAGGTGGAACTCGACAATCCGTACCTG CTGCTGGTAGACAAAAAGGTCAGCAATATCCGTGAGTTGTTACCGGTACTCGAAGCGGTA GCCAAAGCAGGGCGGCCTTTATTCCTGATTGCTGAAGATGTGGAAGGCGAAGCGCTGGCA ACCCTGGTGGTGAATAATCTGCGCGGCATTCTGAAAGTCGCTGCAGTAAAAGCGCCGGGC TTTGGCGATCGTCGCAAGGAGATGTTGCAGGATATAGCGACATTGACCGGTGCTACCGTC ATTGCCGAAGAGGTGGGTCTGAGTCTGGAAAAAACCGAACTGGCGCAGTTGGGTTCAGCC AAACGTGTGGTTATCAGTAAAGACAATACCACTGTGGTAGATGGCGCCGGCGACAAGCAA GCCATTGAGGCCCGCGTCAACCAGATCAAATCCGAAATCGACGTCACCAGCTCTGATTAC GATCGCGAAAAACTGCAGGAGCGATTGGCTAAACTCGCCGGTGGTGTGGCCGTGATTAAA GTGGGCGCGGCCACCGAGGTAGAAATGAAGGAGAAAAAAGACCTGGTAGACGATGCCTTG CATGCAACCCGTGCAGCGGTTGAGGAAGGGATTGTGCCCGGTGGCGGTGTCGCCCTGGTC CGCGCGGCTGAAGCGGTGCGCAGTGCTGGATTGAAAGGGGCCAACGAGGATCAGCAATTG GGTATCAATATTGCTCTGCGTGCAATGGAAGAACCCTTCCGCCAGATAGTCTCCAATGCC GGCGTAGAACCCAGTGTCGTGCTGGAAAAAGTCCGTAATCAGGATCAGGCCACTTATGGC TACAATGCGCAGACAGAAGCCTACGGTGACATGTTGGAGATGGGGATTATCGACCCGGCC AAAGTGACCCGTACTGCCCTGACTAACGCAGGGTCTATCGCGGGACTGATGTTGACCACC GAAGTTATGGTGACCGACAAGCCCAGTGATACCAAAGCCGCGCAGGCGCCAATGCCCGAC TTTGGCTGA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MSAKAILFSKDARERMLTGVNILADAVKATLGPKGRNVILDKSYGAPRVTKDGVSVAKEI TLADKFENMGAQMVKEVASKTADIAGDGTTTATVLAQALVREGHKAIASGINPMDLKRGI DAAVAAAIEHLKPVSKPCNDTKSIRQVATVSANWNEDIGEILAQAMDKVGRDGVITVEEG KSLQNELDVVEGMQFDRGYLSPYFITNQDKMQVELDNPYLLLVDKKVSNIRELLPVLEAV AKAGRPLFLIAEDVEGEALATLVVNNLRGILKVAAVKAPGFGDRRKEMLQDIATLTGATV IAEEVGLSLEKTELAQLGSAKRVVISKDNTTVVDGAGDKQAIEARVNQIKSEIDVTSSDY DREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDLVDDALHATRAAVEEGIVPGGGVALV RAAEAVRSAGLKGANEDQQLGINIALRAMEEPFRQIVSNAGVEPSVVLEKVRNQDQATYG YNAQTEAYGDMLEMGIIDPAKVTRTALTNAGSIAGLMLTTEVMVTDKPSDTKAAQAPMPD FG |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTGCTGGCGCAGGCATTGGTGCGCGAGGGGCACAAGGCGATTGCCTCCGGTATT AATCCCATGGACCTGAAGCGTGGGATTGACGCGGCGGTTGCAGCTGCTATCGAACACCTG AAACCTGTGTCCAAACCCTGCAACGATACCAAGTCTATTCGCCAGGTGGCGACGGTGTCT GCGAACTGGAACGAAGACATTGGCGAAATACTGGCGCAGGCCATGGATAAAGTGGGCCGC GACGGGGTGATTACCGTTGAAGAGGGTAAGTCGCTGCAGAACGAACTCGATGTGGTCGAG GGTATGCAGTTTGATCGAGGCTATCTGTCGCCTTACTTCATTACCAATCAGGATAAAATG CAGGTGGAACTCGACAATCCGTACCTGCTGCTGGTAGACAAAAAGGTCAGCAATATCCGT GAGTTGTTACCGGTACTCGAAGCGGTAGCCAAAGCAGGGCGGCCTTTATTCCTGATTGCT GAAGATGTGGAAGGCGAAGCGCTGGCAACCCTGGTGGTGAATAATCTGCGCGGCATTCTG AAAGTCGCTGCAGTA |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQALVREGHKAIASGINPMDLKRGIDAAVAAAIEHLKPVSKPCNDTKSIRQVATVS ANWNEDIGEILAQAMDKVGRDGVITVEEGKSLQNELDVVEGMQFDRGYLSPYFITNQDKM QVELDNPYLLLVDKKVSNIRELLPVLEAVAKAGRPLFLIAEDVEGEALATLVVNNLRGIL KVAAV |