/data/www/cpndb/blastp_results/b15878.blastp
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= b15878
(542 letters)
Database: reference_ii_a_fp
2551 sequences; 1,383,324 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
b3672 NP_247993 Methanocaldococcus jannaschii DSM 2661 1014 0.0
b14497 YP_003247634 Methanocaldococcus vulcanius M7 ATCC 70... 1005 0.0
b14367 YP_003128536 Methanocaldococcus fervens AG86 999 0.0
b16606 ADG13468 Methanocaldococcus infernus ME 981 0.0
b16885 ADG13638 Methanocaldococcus infernus ME 981 0.0
b26333 WP_004589827 Methanocaldococcus villosus KIN24-T80 968 0.0
b20398 EHP86691 Methanotorris formicicus Mc-S-70 ATCC BAA-687 900 0.0
b19214 YP_004483973 Methanotorris igneus Kol 5 890 0.0
b17709 AEH06536 Methanothermococcus okinawensis IH1 852 0.0
b3733 Methanothermococcus thermolithotrophicus 836 0.0
b3649 BAA33889 Methanothermococcus thermolithotrophicus DSM... 836 0.0
b15782 ABX01970 Methanococcus maripaludis C6 815 0.0
b9969 ABO34377 Methanococcus maripaludis C5 813 0.0
b10133 ABR65828 Methanococcus maripaludis C7 809 0.0
b19322 AEK20536 Methanococcus maripaludis X1 808 0.0
b5023 NP_988635 Methanococcus maripaludis strain S2 808 0.0
b3898 AAM21720 Methanococcus maripaludis LL 808 0.0
b10040 ABR54734 Methanococcus vannielii SB 801 0.0
b15789 ABR56601 Methanococcus aeolicus Nankai-3 796 0.0
b16538 YP_003707809 Methanococcus voltae A3 777 0.0
>b3672 NP_247993 Methanocaldococcus jannaschii DSM 2661
Length = 542
Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/525 (98%), Positives = 523/525 (99%)
Query: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV
Sbjct: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
Query: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP
Sbjct: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
Query: 121 SVIINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
SVIINGYEMARNKA+EELKS+AKEVKP+DTEMLKKIAMTSITGKGAEKAREQLAEIVVEA
Sbjct: 121 SVIINGYEMARNKAVEELKSIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
Query: 181 VRTVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
VR VVDEETGKVDKDLIKVEKKEGAPIEET LIRGVVIDKERVNPQMPKKVENAKIALLN
Sbjct: 181 VRAVVDEETGKVDKDLIKVEKKEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKIALLN 240
Query: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH
Sbjct: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
Query: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
YLAKKGILAVRRVKKSDMEKLAKATGARI+TKIDDLTPEDLGEAGLVEERKVAGDAMIFV
Sbjct: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
Query: 361 EECKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
E+CKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR
Sbjct: 361 EQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
Query: 421 KFAETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
KFAE+VAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF
Sbjct: 421 KFAESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
Query: 481 EGEVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV 525
EGEVVDM+EKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV
Sbjct: 481 EGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV 525
>b14497 YP_003247634 Methanocaldococcus vulcanius M7 ATCC 700851
Length = 542
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/526 (97%), Positives = 524/526 (99%)
Query: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV
Sbjct: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
Query: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP
Sbjct: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
Query: 121 SVIINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
SVIINGYEMARNKAIEELK++AKEVKP+DTEMLKKIAMTSITGKGAEKAR QLAEIVVEA
Sbjct: 121 SVIINGYEMARNKAIEELKAIAKEVKPEDTEMLKKIAMTSITGKGAEKARGQLAEIVVEA 180
Query: 181 VRTVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
VR VVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN
Sbjct: 181 VRAVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
Query: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIA+TGANVVFCQKGIDDLAQH
Sbjct: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIASTGANVVFCQKGIDDLAQH 300
Query: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
YLAKKGILAVRRVKKSDMEKLAKATGARI+TKIDDLTPEDLGEAGLVEERKVAGDAMIFV
Sbjct: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
Query: 361 EECKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
E+CKHPKAVTILARGSTEHVVEEVARA+DDAIGVVKCALEEGKIV+GGGATEIELAKRLR
Sbjct: 361 EQCKHPKAVTILARGSTEHVVEEVARALDDAIGVVKCALEEGKIVSGGGATEIELAKRLR 420
Query: 421 KFAETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
KF+ETVAGREQLAVKAFA+ALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGG+VYGLDVF
Sbjct: 421 KFSETVAGREQLAVKAFAEALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGDVYGLDVF 480
Query: 481 EGEVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
EGEVV+M+EKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK
Sbjct: 481 EGEVVNMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
>b14367 YP_003128536 Methanocaldococcus fervens AG86
Length = 542
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/525 (96%), Positives = 520/525 (99%)
Query: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
MAMAG PIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV
Sbjct: 1 MAMAGTPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
Query: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP
Sbjct: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
Query: 121 SVIINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
SVIINGYE+ARNKAIEELK++AKE+KP++TEMLKKIAMTSITGKGAEKAREQLAEIVVEA
Sbjct: 121 SVIINGYELARNKAIEELKTIAKEIKPENTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
Query: 181 VRTVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
VR VVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVV+DKERVNPQMPKKVENAKIALLN
Sbjct: 181 VRAVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVVDKERVNPQMPKKVENAKIALLN 240
Query: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
CPIEVKETETDAEIRITDP KLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH
Sbjct: 241 CPIEVKETETDAEIRITDPTKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
Query: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
YLAKKGILAVRRVKKSDMEKLAKATGA+IIT IDDLTPEDLGEAGLVEERKVAGDAMIFV
Sbjct: 301 YLAKKGILAVRRVKKSDMEKLAKATGAKIITNIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
Query: 361 EECKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
E+CKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR
Sbjct: 361 EQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
Query: 421 KFAETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
KFAETVAGREQLAV+AFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEV GLDVF
Sbjct: 421 KFAETVAGREQLAVRAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVCGLDVF 480
Query: 481 EGEVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV 525
EGEVV+M+EKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV
Sbjct: 481 EGEVVNMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV 525
>b16606 ADG13468 Methanocaldococcus infernus ME
Length = 540
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/526 (94%), Positives = 520/526 (98%), Gaps = 1/526 (0%)
Query: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
MAM APIVVLP+NVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDI+V
Sbjct: 1 MAM-NAPIVVLPENVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIIV 59
Query: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP
Sbjct: 60 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 119
Query: 121 SVIINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
SVIINGYE+ARNKAIEELK++AKEVKP+DTEMLKKIAMTSITGKGAEKARE+LAEIVVEA
Sbjct: 120 SVIINGYELARNKAIEELKNIAKEVKPEDTEMLKKIAMTSITGKGAEKAREKLAEIVVEA 179
Query: 181 VRTVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
VR+VVDEETGKVDKDLIKVEKKEGAPIEETTLI+GVVIDKERVNPQMPKKVENAKIALLN
Sbjct: 180 VRSVVDEETGKVDKDLIKVEKKEGAPIEETTLIKGVVIDKERVNPQMPKKVENAKIALLN 239
Query: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
CPIEVKETETDAEIRITDP+KL+EFIEQEEKMIKDMV+KIAATGANVVFCQKGIDDLAQH
Sbjct: 240 CPIEVKETETDAEIRITDPSKLIEFIEQEEKMIKDMVDKIAATGANVVFCQKGIDDLAQH 299
Query: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
YLAKKGILAVRRVKKSDMEKLAKATGARI+TKIDDLTPEDLGEAGLVEERKVAGDAMIFV
Sbjct: 300 YLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFV 359
Query: 361 EECKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
E CKHPKAVTILARGSTEHVVEEVARA++DAIGVVKCALE+G+IVAGGGA EIELAKRLR
Sbjct: 360 ENCKHPKAVTILARGSTEHVVEEVARALEDAIGVVKCALEDGRIVAGGGAAEIELAKRLR 419
Query: 421 KFAETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
K++E++ GREQLAV+AFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF
Sbjct: 420 KYSESIEGREQLAVRAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 479
Query: 481 EGEVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
EGEVV+M+EKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEK K
Sbjct: 480 EGEVVNMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKSK 525
>b16885 ADG13638 Methanocaldococcus infernus ME
Length = 540
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/526 (94%), Positives = 520/526 (98%), Gaps = 1/526 (0%)
Query: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
MAM APIVVLP+NVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDI+V
Sbjct: 1 MAM-NAPIVVLPENVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIIV 59
Query: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP
Sbjct: 60 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 119
Query: 121 SVIINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
SVIINGYE+ARNKAIEELK++AKEVKP+DTEMLKKIAMTSITGKGAEKARE+LAEIVVEA
Sbjct: 120 SVIINGYELARNKAIEELKNIAKEVKPEDTEMLKKIAMTSITGKGAEKAREKLAEIVVEA 179
Query: 181 VRTVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
VR+VVDEETGKVDKDLIKVEKKEGAPIEETTLI+GVVIDKERVNPQMPKKVENAKIALLN
Sbjct: 180 VRSVVDEETGKVDKDLIKVEKKEGAPIEETTLIKGVVIDKERVNPQMPKKVENAKIALLN 239
Query: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
CPIEVKETETDAEIRITDP+KL+EFIEQEEKMIKDMV+KIAATGANVVFCQKGIDDLAQH
Sbjct: 240 CPIEVKETETDAEIRITDPSKLIEFIEQEEKMIKDMVDKIAATGANVVFCQKGIDDLAQH 299
Query: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
YLAKKGILAVRRVKKSDMEKLAKATGARI+TKIDDLTPEDLGEAGLVEERKVAGDAMIFV
Sbjct: 300 YLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFV 359
Query: 361 EECKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
E CKHPKAVTILARGSTEHVVEEVARA++DAIGVVKCALE+G+IVAGGGA EIELAKRLR
Sbjct: 360 ENCKHPKAVTILARGSTEHVVEEVARALEDAIGVVKCALEDGRIVAGGGAAEIELAKRLR 419
Query: 421 KFAETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
K++E++ GREQLAV+AFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF
Sbjct: 420 KYSESIEGREQLAVRAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 479
Query: 481 EGEVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
EGEVV+M+EKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEK K
Sbjct: 480 EGEVVNMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKSK 525
>b26333 WP_004589827 Methanocaldococcus villosus KIN24-T80
Length = 543
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/522 (93%), Positives = 513/522 (98%)
Query: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
M+MAG PIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV
Sbjct: 1 MSMAGTPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
Query: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP
Sbjct: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
Query: 121 SVIINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
SVIINGYE+ARNKAIEELK +AKEVKPDD EMLKKIAMT+ITGKGAEKARE+LAEIVVEA
Sbjct: 121 SVIINGYEIARNKAIEELKKIAKEVKPDDKEMLKKIAMTAITGKGAEKAREKLAEIVVEA 180
Query: 181 VRTVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
V TV+D+ETGKV+KDLIKVEKKEGAPIEETTLIRGVVIDKERV+PQMPK+VENAKIALLN
Sbjct: 181 VSTVIDDETGKVEKDLIKVEKKEGAPIEETTLIRGVVIDKERVHPQMPKRVENAKIALLN 240
Query: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
CPIEVKETE DAEIRITDPAK+MEF+EQEEKMIK+MV+KIAATGANVVFCQKGIDDLAQH
Sbjct: 241 CPIEVKETEIDAEIRITDPAKIMEFVEQEEKMIKEMVDKIAATGANVVFCQKGIDDLAQH 300
Query: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
YLAKKGILAVRRVKKSDMEKLAKATGARI+TKIDDLTPEDLGEAGLVEERKVAGDAMIFV
Sbjct: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
Query: 361 EECKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
E CKHPKAVTILARGSTEH+VEEVARAIDDAIGVVKCALE+G+IV GGGATEIELAKR+
Sbjct: 361 ENCKHPKAVTILARGSTEHIVEEVARAIDDAIGVVKCALEDGRIVVGGGATEIELAKRIS 420
Query: 421 KFAETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
KFAETVAGREQLAVKAFA+ALE+IPRTLAENSGLDPIDMLVKLRA HE+EGGEVYGLDVF
Sbjct: 421 KFAETVAGREQLAVKAFAEALEIIPRTLAENSGLDPIDMLVKLRAKHEEEGGEVYGLDVF 480
Query: 481 EGEVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAA 522
EGEVV+M+E+GVVEPLKVKTQAIDSATEAS+MLLRIDDVIAA
Sbjct: 481 EGEVVNMLERGVVEPLKVKTQAIDSATEASIMLLRIDDVIAA 522
>b20398 EHP86691 Methanotorris formicicus Mc-S-70 ATCC BAA-687
Length = 540
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/544 (84%), Positives = 505/544 (92%), Gaps = 6/544 (1%)
Query: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
MA G P++VLP+NVKRYVGRDAQRMNILAGR+IAETVRTTLGPKGMDKMLVD+LGDI++
Sbjct: 1 MAAMGQPVIVLPENVKRYVGRDAQRMNILAGRVIAETVRTTLGPKGMDKMLVDDLGDIII 60
Query: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQN+HP
Sbjct: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHP 120
Query: 121 SVIINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
+++INGY++A KA+EEL ++A ++KPD+TEMLKKIAMT+ITGKGAEKARE+LAEI+VEA
Sbjct: 121 TIVINGYQLALKKALEELNNIAIDIKPDNTEMLKKIAMTAITGKGAEKAREKLAEIIVEA 180
Query: 181 VRTVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
VRTV+DE GKVDKDLIK+EKKEGAPIE T LIRGVVIDKERVNPQMPKK+ENAKIALLN
Sbjct: 181 VRTVIDE-NGKVDKDLIKIEKKEGAPIENTELIRGVVIDKERVNPQMPKKIENAKIALLN 239
Query: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
CPIEVKETETDAEIRITDPAKLMEFIEQEEKM+K+MVE I ATGANVVFCQKGIDDLAQH
Sbjct: 240 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMLKEMVEMIKATGANVVFCQKGIDDLAQH 299
Query: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
YLAK+GILAVRRVKKSDMEKL+KATGA+IIT I DLTPEDLGEAG+VEE+KVAGDAMIFV
Sbjct: 300 YLAKEGILAVRRVKKSDMEKLSKATGAKIITNIKDLTPEDLGEAGVVEEKKVAGDAMIFV 359
Query: 361 EECKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
EECK PKAVTIL RG+TEHV+EEVARAIDDAIGVV C +E+GKIVAGGGA E+ELAKR+R
Sbjct: 360 EECKLPKAVTILVRGTTEHVMEEVARAIDDAIGVVACTIEDGKIVAGGGAPEVELAKRIR 419
Query: 421 KFAETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
+AE+V GREQLAVKAFADALEVIPRTLAENSGLDPID LV LRA HEK+ G GLDVF
Sbjct: 420 DYAESVEGREQLAVKAFADALEVIPRTLAENSGLDPIDTLVNLRAKHEKD-GVTLGLDVF 478
Query: 481 EGEVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVKEDKG--GEGGDMGG 538
GEV+DM+EKGVVEPL+VKTQAI SATEA+ MLLRIDDVIAAEK+ + KG G+ GDMGG
Sbjct: 479 SGEVIDMLEKGVVEPLRVKTQAIISATEATEMLLRIDDVIAAEKLDKGKGDSGDMGDMGG 538
Query: 539 GDEF 542
EF
Sbjct: 539 --EF 540
>b19214 YP_004483973 Methanotorris igneus Kol 5
Length = 541
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/541 (84%), Positives = 502/541 (92%), Gaps = 5/541 (0%)
Query: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
MA G P++VLP+NVKRYVGRDAQRMNILAGR+IAETVRTTLGPKGMDKMLVD+LGDIV+
Sbjct: 1 MATLGQPVIVLPENVKRYVGRDAQRMNILAGRVIAETVRTTLGPKGMDKMLVDDLGDIVI 60
Query: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQN+HP
Sbjct: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHP 120
Query: 121 SVIINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEA 180
++IINGY++A KA+EEL+++A ++KPDD EMLKKIAMT+ITGKGAEKARE+LAE++VEA
Sbjct: 121 TIIINGYQLALKKALEELENIAIDIKPDDVEMLKKIAMTAITGKGAEKAREKLAEVIVEA 180
Query: 181 VRTVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLN 240
VRTV+DE GKVDKDLIK+EKKEGAPIE+T LI+GVVIDKERVNPQMPKKVENAKIALLN
Sbjct: 181 VRTVIDE-NGKVDKDLIKIEKKEGAPIEKTELIKGVVIDKERVNPQMPKKVENAKIALLN 239
Query: 241 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQH 300
CPIEVKETETDAEIRITDPAKLMEFIEQEEKM+K+MV+ I ATGANVVFCQKGIDDLAQH
Sbjct: 240 CPIEVKETETDAEIRITDPAKLMEFIEQEEKMLKEMVDMIKATGANVVFCQKGIDDLAQH 299
Query: 301 YLAKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFV 360
YLAK GILAVRRVKKSDMEKLAKATGA+I+T I DLTPEDLGEAGLVEERKVAGDAMIFV
Sbjct: 300 YLAKAGILAVRRVKKSDMEKLAKATGAKIVTNIKDLTPEDLGEAGLVEERKVAGDAMIFV 359
Query: 361 EECKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLR 420
E+CKHPKAVTIL RG+TEHV+EEVARAIDDAIGVV C +E+GKIVAGGGA E+ELA+R+R
Sbjct: 360 EDCKHPKAVTILVRGTTEHVMEEVARAIDDAIGVVACTIEDGKIVAGGGAPEVELARRIR 419
Query: 421 KFAETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVF 480
FAETV GREQLAVKAFADALEVIPRTLAENSGLDPID LV LRA HE++ G GLDVF
Sbjct: 420 DFAETVEGREQLAVKAFADALEVIPRTLAENSGLDPIDTLVNLRAKHERD-GVTLGLDVF 478
Query: 481 EGEVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVKEDKGGEG---GDMG 537
GEVVDM+E+GVVEPL+VKTQAI SATEA+ MLLRIDDVIAAEK+ +DK GDMG
Sbjct: 479 TGEVVDMLEEGVVEPLRVKTQAIISATEATEMLLRIDDVIAAEKLDKDKDKGDSDMGDMG 538
Query: 538 G 538
G
Sbjct: 539 G 539
>b17709 AEH06536 Methanothermococcus okinawensis IH1
Length = 545
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/522 (82%), Positives = 474/522 (90%), Gaps = 1/522 (0%)
Query: 4 AGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTND 63
AG P+VVLP+NVKRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGDIVVTND
Sbjct: 3 AGQPVVVLPENVKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDIVVTND 62
Query: 64 GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVI 123
GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQN+HP+++
Sbjct: 63 GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIV 122
Query: 124 INGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRT 183
I GY++A K E LK +A +VK DD EMLKKIAMTSITGKGAEKA+E+L +I+VEAV
Sbjct: 123 IKGYQLALEKVQEILKEIAVDVKADDKEMLKKIAMTSITGKGAEKAKEKLGDIIVEAVTA 182
Query: 184 VVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPI 243
VVDE GK+DKDLIKVEKKEG ++ET LIRGVVIDKERVNPQMPKKVENAKIALLNCPI
Sbjct: 183 VVDE-NGKIDKDLIKVEKKEGTSVDETELIRGVVIDKERVNPQMPKKVENAKIALLNCPI 241
Query: 244 EVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLA 303
EVKETETDA+I ITDP+K+MEFIEQEEKM+KDMV++I A+GANVVFCQKGIDDLAQHYLA
Sbjct: 242 EVKETETDAKISITDPSKMMEFIEQEEKMLKDMVDEIKASGANVVFCQKGIDDLAQHYLA 301
Query: 304 KKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEEC 363
K GILAVRRVKKSD+EKL+KATGA IIT I DLT EDLGEAGLV E KVAGDAMIFV+EC
Sbjct: 302 KAGILAVRRVKKSDIEKLSKATGANIITNIKDLTAEDLGEAGLVSEEKVAGDAMIFVKEC 361
Query: 364 KHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFA 423
KHPKAVTILARG+TEHVV+EVARAIDDAIGVV C +E+GKIVAGGGA EIELA RLR +A
Sbjct: 362 KHPKAVTILARGTTEHVVDEVARAIDDAIGVVACTIEDGKIVAGGGAAEIELAMRLRDYA 421
Query: 424 ETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGE 483
+TV+GREQLAV+ FADALEVIPRTLAEN+GLD I+MLV LRA H EG YGL+VF GE
Sbjct: 422 DTVSGREQLAVRGFADALEVIPRTLAENAGLDAIEMLVNLRAKHATEGNARYGLNVFSGE 481
Query: 484 VVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV 525
V DM E GVVEPL+VKTQAI SATE+S MLLRIDDVIAAEK+
Sbjct: 482 VEDMSENGVVEPLRVKTQAIQSATESSEMLLRIDDVIAAEKL 523
>b3733 Methanothermococcus thermolithotrophicus
Length = 544
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/522 (79%), Positives = 473/522 (90%), Gaps = 1/522 (0%)
Query: 4 AGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTND 63
A P+VVLP+NVKR++GRDAQRMNILAGRII ETVR+TLGPKGMDKMLVD+LGDIVVTND
Sbjct: 3 ANQPVVVLPENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTND 62
Query: 64 GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVI 123
GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQN+HP+++
Sbjct: 63 GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIV 122
Query: 124 INGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRT 183
I GY++A KA E LK +A +VK DD E+L KIAMTSITGKGAEKA+E+L E++VEAV
Sbjct: 123 IKGYQLAVQKAQEVLKEIAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTA 182
Query: 184 VVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPI 243
VVDE +GKVDKDLIK+EKKEGA ++ET LI GV+IDKERV+PQMPKK+ENAKIALLNCPI
Sbjct: 183 VVDE-SGKVDKDLIKIEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPI 241
Query: 244 EVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLA 303
EVKETETDAEIRITDP KLMEFIEQEEKM+KDMV+ I A+GANV+FCQKGIDDLAQHYLA
Sbjct: 242 EVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYLA 301
Query: 304 KKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEEC 363
K+GILAVRRVKKSDMEKL+KATGA ++T I DL EDLGEAG+VEERK+AGDAMIFVEEC
Sbjct: 302 KEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGDAMIFVEEC 361
Query: 364 KHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFA 423
KHPKAVT+L RG+TEHV+EEVARA+DDAIGVV C +E+GKIVAGGGA EIELA +LR +A
Sbjct: 362 KHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYA 421
Query: 424 ETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGE 483
E V+GREQLAV+AFADALEV+PRTLAEN+GLD I+MLVKLRA H + YGL+VF G+
Sbjct: 422 EGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGD 481
Query: 484 VVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV 525
V +M E GVVEPL+VKTQAI SATEA+ MLLRIDDVIAAEK+
Sbjct: 482 VENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIAAEKL 523
>b3649 BAA33889 Methanothermococcus thermolithotrophicus DSM2095
Length = 544
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/522 (79%), Positives = 473/522 (90%), Gaps = 1/522 (0%)
Query: 4 AGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTND 63
A P+VVLP+NVKR++GRDAQRMNILAGRII ETVR+TLGPKGMDKMLVD+LGDIVVTND
Sbjct: 3 ANQPVVVLPENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTND 62
Query: 64 GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVI 123
GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQN+HP+++
Sbjct: 63 GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIV 122
Query: 124 INGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRT 183
I GY++A KA E LK +A +VK DD E+L KIAMTSITGKGAEKA+E+L E++VEAV
Sbjct: 123 IKGYQLAVQKAQEVLKEIAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTA 182
Query: 184 VVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPI 243
VVDE +GKVDKDLIK+EKKEGA ++ET LI GV+IDKERV+PQMPKK+ENAKIALLNCPI
Sbjct: 183 VVDE-SGKVDKDLIKIEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPI 241
Query: 244 EVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLA 303
EVKETETDAEIRITDP KLMEFIEQEEKM+KDMV+ I A+GANV+FCQKGIDDLAQHYLA
Sbjct: 242 EVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYLA 301
Query: 304 KKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEEC 363
K+GILAVRRVKKSDMEKL+KATGA ++T I DL EDLGEAG+VEERK+AGDAMIFVEEC
Sbjct: 302 KEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGDAMIFVEEC 361
Query: 364 KHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFA 423
KHPKAVT+L RG+TEHV+EEVARA+DDAIGVV C +E+GKIVAGGGA EIELA +LR +A
Sbjct: 362 KHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYA 421
Query: 424 ETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGE 483
E V+GREQLAV+AFADALEV+PRTLAEN+GLD I+MLVKLRA H + YGL+VF G+
Sbjct: 422 EGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGD 481
Query: 484 VVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKV 525
V +M E GVVEPL+VKTQAI SATEA+ MLLRIDDVIAAEK+
Sbjct: 482 VENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIAAEKL 523
>b15782 ABX01970 Methanococcus maripaludis C6
Length = 542
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/517 (77%), Positives = 470/517 (90%), Gaps = 1/517 (0%)
Query: 10 VLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILK 69
VLP+N+KRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGD+VVTNDGVTIL+
Sbjct: 6 VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILR 65
Query: 70 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEM 129
EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVV+AGELLRKAEELLDQN+HP++++ GY+M
Sbjct: 66 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQM 125
Query: 130 ARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRTVVDEET 189
A KA E LKS+A EV D E+L KIAMTSITGKGAEKA+EQLA+I+VEAV VVDEE
Sbjct: 126 AAQKAQELLKSIACEVGAQDKEILTKIAMTSITGKGAEKAKEQLADIIVEAVSAVVDEE- 184
Query: 190 GKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETE 249
GKVDKDLIK+EKK GA I++T LI+GV++DKERV+ QMPKKV +AKIALLNC IE+KETE
Sbjct: 185 GKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVVDAKIALLNCAIEIKETE 244
Query: 250 TDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILA 309
TDAEIRITDPAKLMEFIEQEEKM+KDMV +I A+GANV+FCQKGIDDLAQHYLAK+GI+A
Sbjct: 245 TDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVA 304
Query: 310 VRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEECKHPKAV 369
RRVKKSDMEKLAKATGA +IT I DL+ +DLGEAGLVEERK++GD+MIFVEECKHPKAV
Sbjct: 305 ARRVKKSDMEKLAKATGANVITNIKDLSAQDLGEAGLVEERKISGDSMIFVEECKHPKAV 364
Query: 370 TILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAETVAGR 429
T+L RG+TEHV+EEVARA+DDA+GVV C +E+G+IVAGGG+TE+EL+ +LR++AE ++GR
Sbjct: 365 TMLIRGTTEHVIEEVARAVDDAVGVVACTIEDGRIVAGGGSTEVELSMKLREYAEGISGR 424
Query: 430 EQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMME 489
EQLAV+AFADALEVIPRTLAEN+GLD I++LV++RAAH G + GL+VF GEV DM
Sbjct: 425 EQLAVRAFADALEVIPRTLAENAGLDAIEILVRVRAAHASNGNKCAGLNVFTGEVEDMCA 484
Query: 490 KGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
GVVEPL+VKTQAI SA E++ MLLRIDDVIAAEK++
Sbjct: 485 NGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLR 521
>b9969 ABO34377 Methanococcus maripaludis C5
Length = 545
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/517 (77%), Positives = 471/517 (91%), Gaps = 1/517 (0%)
Query: 10 VLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILK 69
VLP+N+KRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGD+VVTNDGVTIL+
Sbjct: 6 VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILR 65
Query: 70 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEM 129
EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVV+AGELLRKAEELLDQN+HP++++ GY+M
Sbjct: 66 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQM 125
Query: 130 ARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRTVVDEET 189
A KA E LKS+A EV D E+L KIAMTSITGKGAEKA+E+LA+I+V+AV VVDEE
Sbjct: 126 AAQKAQELLKSIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLADIIVDAVSAVVDEE- 184
Query: 190 GKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETE 249
GKVDKDLIK+EKK GA I++T LI+GV++DKERV+ QMPKKV ++KIALLNC IE+KETE
Sbjct: 185 GKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDSKIALLNCAIEIKETE 244
Query: 250 TDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILA 309
TDAEIRITDPAKLMEFIEQEEKM+KDMV +I A+GANV+FCQKGIDDLAQHYLAK+GI+A
Sbjct: 245 TDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIMA 304
Query: 310 VRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEECKHPKAV 369
RRVKKSDMEKLAKATGA +IT I DL+ EDLG+AGLVEERK++GD+MIFVEECKHPKAV
Sbjct: 305 ARRVKKSDMEKLAKATGANVITNIKDLSAEDLGDAGLVEERKISGDSMIFVEECKHPKAV 364
Query: 370 TILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAETVAGR 429
T+L RG+TEHV+EEVARA+DDA+GVV C +E+G+IVAGGG+TE+EL+ +LR++AE ++GR
Sbjct: 365 TMLIRGTTEHVIEEVARAVDDAVGVVACTIEDGRIVAGGGSTEVELSMKLREYAEGISGR 424
Query: 430 EQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMME 489
EQLAV+AFADALEVIPRTLAEN+GLD I++LVK+RAAH G + GL+VF GEV DM +
Sbjct: 425 EQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGEVEDMCD 484
Query: 490 KGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
GVVEPL+VKTQAI SA E++ MLLRIDDVIAAEK++
Sbjct: 485 NGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLR 521
>b10133 ABR65828 Methanococcus maripaludis C7
Length = 542
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/517 (76%), Positives = 469/517 (90%), Gaps = 1/517 (0%)
Query: 10 VLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILK 69
VLP+N+KRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGD+VVTNDGVTIL+
Sbjct: 6 VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILR 65
Query: 70 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEM 129
EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVV+AGELLRKAEELLDQN+HP++++ GY+M
Sbjct: 66 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQM 125
Query: 130 ARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRTVVDEET 189
A KA E LK++A EV D E+L KIAMTSITGKGAEKA+EQLA+I+V+AV VVDE
Sbjct: 126 AAAKAQELLKAIACEVGAQDKEILTKIAMTSITGKGAEKAKEQLADIIVDAVSAVVDE-N 184
Query: 190 GKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETE 249
GKVDKDLIK+EKK GA I++T LI+GV++DKERV+ QMPKKV +AKIALLNC IE+KETE
Sbjct: 185 GKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVVDAKIALLNCAIEIKETE 244
Query: 250 TDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILA 309
TDAEIRITDPAKLMEFIEQEEKM+KDMV +I A+GANV+FCQKGIDDLAQHYLAK+GI+A
Sbjct: 245 TDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVA 304
Query: 310 VRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEECKHPKAV 369
RRVKKSDMEKLAKATGA +IT I DL+ +DLG+AGLVEERK++GD+MIFVEECKHPKAV
Sbjct: 305 ARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAV 364
Query: 370 TILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAETVAGR 429
T+L RG+TEHV+EEVARA+DDA+GVV C +E+G+IVAGGG+TE+EL+ +LR++AE ++GR
Sbjct: 365 TMLIRGTTEHVIEEVARAVDDAVGVVSCTIEDGRIVAGGGSTEVELSMKLREYAEGISGR 424
Query: 430 EQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMME 489
EQLAV+AFADALEVIPRTLAEN+GLD I++LV++RAAH G + GL+VF GEV DM
Sbjct: 425 EQLAVRAFADALEVIPRTLAENAGLDAIEILVRVRAAHASNGNKCAGLNVFTGEVEDMCA 484
Query: 490 KGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
GVVEPL+VKTQAI SA E++ MLLRIDDVIAAEK++
Sbjct: 485 NGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLR 521
>b19322 AEK20536 Methanococcus maripaludis X1
Length = 543
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/517 (76%), Positives = 469/517 (90%), Gaps = 1/517 (0%)
Query: 10 VLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILK 69
VLP+N+KRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGD+VVTNDGVTIL+
Sbjct: 7 VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILR 66
Query: 70 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEM 129
EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVV+AGELLRKAEELLDQN+HP++++ GY+
Sbjct: 67 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQA 126
Query: 130 ARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRTVVDEET 189
A KA E LK++A EV D E+L KIAMTSITGKGAEKA+E+LAEI+VEAV VVD+E
Sbjct: 127 AAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDE- 185
Query: 190 GKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETE 249
GKVDKDLIK+EKK GA I++T LI+GV++DKERV+ QMPKKV +AKIALLNC IE+KETE
Sbjct: 186 GKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETE 245
Query: 250 TDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILA 309
TDAEIRITDPAKLMEFIEQEEKM+KDMV +I A+GANV+FCQKGIDDLAQHYLAK+GI+A
Sbjct: 246 TDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIMA 305
Query: 310 VRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEECKHPKAV 369
RRVKKSDMEKLAKATGA +IT I DL+ +DLG+AGLVEERK++GD+MIFVEECKHPKAV
Sbjct: 306 ARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAV 365
Query: 370 TILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAETVAGR 429
T+L RG+TEHV+EEVARA+DDA+GVV C +E+G+IV+GGG+TE+EL+ +LR++AE ++GR
Sbjct: 366 TMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGR 425
Query: 430 EQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMME 489
EQLAV+AFADALEVIPRTLAEN+GLD I++LVK+RAAH G + GL+VF G V DM E
Sbjct: 426 EQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCE 485
Query: 490 KGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
GVVEPL+VKTQAI SA E++ MLLRIDDVIAAEK++
Sbjct: 486 NGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLR 522
>b5023 NP_988635 Methanococcus maripaludis strain S2
Length = 543
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/517 (76%), Positives = 469/517 (90%), Gaps = 1/517 (0%)
Query: 10 VLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILK 69
VLP+N+KRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGD+VVTNDGVTIL+
Sbjct: 7 VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILR 66
Query: 70 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEM 129
EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVV+AGELLRKAEELLDQN+HP++++ GY+
Sbjct: 67 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQA 126
Query: 130 ARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRTVVDEET 189
A KA E LK++A EV D E+L KIAMTSITGKGAEKA+E+LAEI+VEAV VVD+E
Sbjct: 127 AAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDE- 185
Query: 190 GKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETE 249
GKVDKDLIK+EKK GA I++T LI+GV++DKERV+ QMPKKV +AKIALLNC IE+KETE
Sbjct: 186 GKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETE 245
Query: 250 TDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILA 309
TDAEIRITDPAKLMEFIEQEEKM+KDMV +I A+GANV+FCQKGIDDLAQHYLAK+GI+A
Sbjct: 246 TDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVA 305
Query: 310 VRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEECKHPKAV 369
RRVKKSDMEKLAKATGA +IT I DL+ +DLG+AGLVEERK++GD+MIFVEECKHPKAV
Sbjct: 306 ARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAV 365
Query: 370 TILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAETVAGR 429
T+L RG+TEHV+EEVARA+DDA+GVV C +E+G+IV+GGG+TE+EL+ +LR++AE ++GR
Sbjct: 366 TMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGR 425
Query: 430 EQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMME 489
EQLAV+AFADALEVIPRTLAEN+GLD I++LVK+RAAH G + GL+VF G V DM E
Sbjct: 426 EQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCE 485
Query: 490 KGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
GVVEPL+VKTQAI SA E++ MLLRIDDVIAAEK++
Sbjct: 486 NGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLR 522
>b3898 AAM21720 Methanococcus maripaludis LL
Length = 543
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/517 (76%), Positives = 469/517 (90%), Gaps = 1/517 (0%)
Query: 10 VLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILK 69
VLP+N+KRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGD+VVTNDGVTIL+
Sbjct: 7 VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILR 66
Query: 70 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEM 129
EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVV+AGELLRKAEELLDQN+HP++++ GY+
Sbjct: 67 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQA 126
Query: 130 ARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRTVVDEET 189
A KA E LK++A EV D E+L KIAMTSITGKGAEKA+E+LAEI+VEAV VVD+E
Sbjct: 127 AAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDE- 185
Query: 190 GKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETE 249
GKVDKDLIK+EKK GA I++T LI+GV++DKERV+ QMPKKV +AKIALLNC IE+KETE
Sbjct: 186 GKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETE 245
Query: 250 TDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILA 309
TDAEIRITDPAKLMEFIEQEEKM+KDMV +I A+GANV+FCQKGIDDLAQHYLAK+GI+A
Sbjct: 246 TDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVA 305
Query: 310 VRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEECKHPKAV 369
RRVKKSDMEKLAKATGA +IT I DL+ +DLG+AGLVEERK++GD+MIFVEECKHPKAV
Sbjct: 306 ARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAV 365
Query: 370 TILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAETVAGR 429
T+L RG+TEHV+EEVARA+DDA+GVV C +E+G+IV+GGG+TE+EL+ +LR++AE ++GR
Sbjct: 366 TMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGR 425
Query: 430 EQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMME 489
EQLAV+AFADALEVIPRTLAEN+GLD I++LVK+RAAH G + GL+VF G V DM E
Sbjct: 426 EQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCE 485
Query: 490 KGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
GVVEPL+VKTQAI SA E++ MLLRIDDVIAAEK++
Sbjct: 486 NGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLR 522
>b10040 ABR54734 Methanococcus vannielii SB
Length = 543
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/517 (76%), Positives = 466/517 (90%), Gaps = 1/517 (0%)
Query: 10 VLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILK 69
VLP+N+KRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGD+VVTNDGVTIL+
Sbjct: 6 VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILR 65
Query: 70 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEM 129
EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVV+AGELLRKAEELLDQN+HP++++ GY+M
Sbjct: 66 EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVLAGELLRKAEELLDQNVHPTIVVKGYQM 125
Query: 130 ARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRTVVDEET 189
A KA E LK VA +V D E+L KIAMTSITGKGAEKA+EQLAEI+V+AV VVDE+
Sbjct: 126 AAQKAQEILKEVACDVSAQDKELLIKIAMTSITGKGAEKAKEQLAEIIVDAVSAVVDED- 184
Query: 190 GKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETE 249
GKVDKDLIK+EKK+GA I++T LI+GV++DKERV+ QMPKKV NAKIALLNC IE+KETE
Sbjct: 185 GKVDKDLIKIEKKQGASIDDTELIKGVLVDKERVSAQMPKKVVNAKIALLNCAIEIKETE 244
Query: 250 TDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILA 309
TDAEIRITDPAKLMEFIEQEEKM+KDMV +I A+GANVVFCQKGIDDLAQH+LAK+GI+A
Sbjct: 245 TDAEIRITDPAKLMEFIEQEEKMLKDMVNEIKASGANVVFCQKGIDDLAQHFLAKEGIVA 304
Query: 310 VRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEECKHPKAV 369
RRVKKSDMEKLAKATGA +I I DL+ DLG+AG+VEE+K++GDAMIFVEECK PKAV
Sbjct: 305 ARRVKKSDMEKLAKATGATVINNIKDLSAADLGDAGIVEEKKISGDAMIFVEECKLPKAV 364
Query: 370 TILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAETVAGR 429
T+L RG+TEHV+EEVARA+DDA+GVV C +E+GKIV+GGG+TE+EL+ RLR++AE ++GR
Sbjct: 365 TMLIRGTTEHVIEEVARAVDDAVGVVACTIEDGKIVSGGGSTEVELSLRLREYAEGISGR 424
Query: 430 EQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMME 489
EQLAV+AFADALEVIPRTLAEN+GLD I++LVK+RAAH G + GL+VF G V DM
Sbjct: 425 EQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGNVEDMCA 484
Query: 490 KGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
GVVEPL+VKTQA+ SA E++ MLLRIDDVIAAEK++
Sbjct: 485 NGVVEPLRVKTQAVQSAAESTEMLLRIDDVIAAEKLR 521
>b15789 ABR56601 Methanococcus aeolicus Nankai-3
Length = 543
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/534 (75%), Positives = 466/534 (87%), Gaps = 8/534 (1%)
Query: 3 MAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTN 62
M+G P V+P++VKRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD+LGDIV+TN
Sbjct: 1 MSG-PTNVMPEHVKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDIVITN 59
Query: 63 DGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSV 122
DGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTT+AV++AGELLRKAEELLDQN+HP++
Sbjct: 60 DGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTSAVIVAGELLRKAEELLDQNVHPTM 119
Query: 123 IINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVR 182
II GY++A K LK +A V +D E+LKKIAMT+ITGKGAEKA+ +AEI+V+AV
Sbjct: 120 IIKGYQLALGKVQSILKDMATTVDVEDKELLKKIAMTAITGKGAEKAKGHIAEIIVDAVT 179
Query: 183 TVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCP 242
+VVD + GK+D DLIK+EKKEG +EET+LI+G++IDKERVNPQMPKKVE+AKIALLNCP
Sbjct: 180 SVVDGD-GKIDTDLIKIEKKEGIAVEETSLIKGILIDKERVNPQMPKKVEDAKIALLNCP 238
Query: 243 IEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYL 302
IE+K TETDA+I ITDP K+MEFIEQEEKM+KDMVE+I A+GANV+ CQKGIDDLAQHYL
Sbjct: 239 IEIKSTETDAKISITDPTKMMEFIEQEEKMLKDMVEEIKASGANVLVCQKGIDDLAQHYL 298
Query: 303 AKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEE 362
AK GILA+RRVKKSD+EKL KATGA II+ I DLT +DLGEAG+V E KVAGD MIFV+E
Sbjct: 299 AKAGILAIRRVKKSDIEKLTKATGANIISNIKDLTADDLGEAGVVVEEKVAGDNMIFVKE 358
Query: 363 CKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKF 422
CKHPKAVTIL RG+TEHVV+EVARAIDDAIGVV C +E+GKIVAGGGA E+E A RLR+F
Sbjct: 359 CKHPKAVTILVRGTTEHVVDEVARAIDDAIGVVSCTIEDGKIVAGGGAVEVETAMRLREF 418
Query: 423 AETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEG 482
A++V+GREQLAVK FADALEVIPRTLAEN+GLD I+MLV LRA H EG +GL+V G
Sbjct: 419 ADSVSGREQLAVKGFADALEVIPRTLAENAGLDAIEMLVNLRAKHATEGSTTFGLNVLTG 478
Query: 483 EVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVKEDKGGEGGDM 536
EV DM GVVEPL+VKTQAI SATE++ MLLRIDDVIAAEK+ GGDM
Sbjct: 479 EVEDMAANGVVEPLRVKTQAIQSATESAEMLLRIDDVIAAEKLG------GGDM 526
>b16538 YP_003707809 Methanococcus voltae A3
Length = 547
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/524 (74%), Positives = 460/524 (87%), Gaps = 3/524 (0%)
Query: 3 MAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTN 62
MAG VLP+N+KRY+GRDAQRMNILAGRIIAETVR+TLGPKGMDKMLVD++GD+VVTN
Sbjct: 7 MAGPNQGVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDMGDVVVTN 66
Query: 63 DGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSV 122
DGVTIL+EMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVV AGELLRKAEELLDQN+HP++
Sbjct: 67 DGVTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVTAGELLRKAEELLDQNVHPTI 126
Query: 123 IINGYEMARNKAIEELKSVAKEVKPDDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVR 182
++ GY+MA K E LK +A EV +D E+L KIAMTSITGKGAEKA+ +LA+I+V+AV
Sbjct: 127 VVKGYQMAAQKCQEVLKEIACEVSSEDKEILTKIAMTSITGKGAEKAKAKLADIIVDAVS 186
Query: 183 TVVDEETGKVDKDLIKVEKKEGAPIEETTLIRGVVIDKERVNPQMPKKVENAKIALLNCP 242
V E G+V+KDLIK+EKK GA I+ET L++GV+IDKERV+ QMPKKVE AKIALLNC
Sbjct: 187 AV--SENGEVEKDLIKIEKKAGASIDETELVKGVLIDKERVSAQMPKKVEGAKIALLNCA 244
Query: 243 IEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYL 302
IEVKETETDAEIRITDPAKLMEFIEQEEKM+KDMV +I GA V+FCQKGIDDLAQHYL
Sbjct: 245 IEVKETETDAEIRITDPAKLMEFIEQEEKMLKDMVLEIKNAGATVLFCQKGIDDLAQHYL 304
Query: 303 AKKGILAVRRVKKSDMEKLAKATGARIITKIDDLTPEDLGEAGLVEERKVAGDAMIFVEE 362
AK+GI+A RRVKKSDMEKLAKATGA IIT I DL+ EDLG+AG+VEE ++GD MIFV+E
Sbjct: 305 AKEGIMAARRVKKSDMEKLAKATGANIITNIKDLSAEDLGDAGIVEEEVISGDKMIFVKE 364
Query: 363 CKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKF 422
CK PKAVT+L RG+T+HV+EEVARA+DDAIGVV C +E+GKIV+GGG+TE+EL+ +LR+F
Sbjct: 365 CKLPKAVTMLIRGTTDHVIEEVARAVDDAIGVVACTIEDGKIVSGGGSTEVELSMKLREF 424
Query: 423 AETVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEG 482
AE + GREQLAV+AFADALEVIPRTLAEN+GLD I++LV++RAAH G + GL+VF G
Sbjct: 425 AEGIDGREQLAVRAFADALEVIPRTLAENAGLDAIEILVRVRAAHAG-GNKCAGLNVFTG 483
Query: 483 EVVDMMEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526
EV DM E GVVEPL+VKTQAI SA E++ MLLRIDDVIAAEK++
Sbjct: 484 EVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLR 527
Database: reference_ii_a_fp
Posted date: Apr 22, 2024 1:00 AM
Number of letters in database: 1,383,324
Number of sequences in database: 2551
Lambda K H
0.313 0.133 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2551
Number of Hits to DB: 1,966,420
Number of extensions: 97306
Number of successful extensions: 11143
Number of sequences better than 10.0: 2544
Number of HSP's gapped: 2820
Number of HSP's successfully gapped: 2606
Length of query: 542
Length of database: 1,383,324
Length adjustment: 90
Effective length of query: 452
Effective length of database: 1,153,734
Effective search space: 521487768
Effective search space used: 521487768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)