/data/www/cpndb/fasta_results/b13674.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b13674 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b13674
<pre>
  1>>>b13674 555 nt - 555 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0037;  K=3.945e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  1.440
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b20678',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20678" target=_"blank">b20678</a> ALEC01000003 Vibrio cholerae HE-25      ( 555) [f] 2775 29.6     7.2 <A HREF="#b20678">align</A>
<a onClick="window.open('getRecord.php?id=b19314',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19314" target=_"blank">b19314</a> AFOQ01000008 Vibrio cholerae HE39       ( 555) [f] 2766 29.5     7.5 <A HREF="#b19314">align</A>
<a onClick="window.open('getRecord.php?id=b21336',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21336" target=_"blank">b21336</a> AJRX01000032 Vibrio cholerae HE-40      ( 555) [f] 2766 29.5     7.5 <A HREF="#b21336">align</A>
<a onClick="window.open('getRecord.php?id=b21334',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21334" target=_"blank">b21334</a> AJRY01000032 Vibrio cholerae HE-46      ( 555) [f] 2766 29.5     7.5 <A HREF="#b21334">align</A>
<a onClick="window.open('getRecord.php?id=b24040',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24040" target=_"blank">b24040</a> APFY01000051 Vibrio cholerae O1 str. EM ( 555) [f] 2757 29.5     7.7 <A HREF="#b24040">align</A>
<a onClick="window.open('getRecord.php?id=b19363',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19363" target=_"blank">b19363</a> AFOP01000160 Vibrio cholerae HE-09      ( 555) [f] 2757 29.5     7.7 <A HREF="#b19363">align</A>
<a onClick="window.open('getRecord.php?id=b24077',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24077" target=_"blank">b24077</a> APFK01000078 Vibrio cholerae O1 str. 11 ( 555) [f] 2748 29.4       8 <A HREF="#b24077">align</A>
<a onClick="window.open('getRecord.php?id=b10374',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10374" target=_"blank">b10374</a> NZ_AAWG01000058 Vibrio cholerae 623-39  ( 555) [f] 2748 29.4       8 <A HREF="#b10374">align</A>
<a onClick="window.open('getRecord.php?id=b23740',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23740" target=_"blank">b23740</a> NZ_AFSV01000029 Vibrio cholerae O1 str. ( 555) [f] 2748 29.4       8 <A HREF="#b23740">align</A>
<a onClick="window.open('getRecord.php?id=b24075',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24075" target=_"blank">b24075</a> APFL01000048 Vibrio cholerae O1 str. 87 ( 555) [f] 2748 29.4       8 <A HREF="#b24075">align</A>
<a onClick="window.open('getRecord.php?id=b10336',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10336" target=_"blank">b10336</a> DS265224 Vibrio cholerae AM-19226       ( 555) [f] 2748 29.4       8 <A HREF="#b10336">align</A>
<a onClick="window.open('getRecord.php?id=b21466',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21466" target=_"blank">b21466</a> ALEB01000055 Vibrio cholerae HE-16      ( 555) [f] 2748 29.4       8 <A HREF="#b21466">align</A>
<a onClick="window.open('getRecord.php?id=b19311',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19311" target=_"blank">b19311</a> AFOR01000005 Vibrio cholerae HE48       ( 555) [f] 2748 29.4       8 <A HREF="#b19311">align</A>
<a onClick="window.open('getRecord.php?id=b21352',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21352" target=_"blank">b21352</a> AJRP01000038 Vibrio cholerae HC-41B1    ( 555) [f] 2748 29.4       8 <A HREF="#b21352">align</A>
<a onClick="window.open('getRecord.php?id=b23554',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23554" target=_"blank">b23554</a> NZ_AMBR01000005   Vibrio cholerae VC35  ( 555) [f] 2748 29.4       8 <A HREF="#b23554">align</A>
<a onClick="window.open('getRecord.php?id=b21537',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21537" target=_"blank">b21537</a> AJSK01000036 Vibrio cholerae HC-44C1    ( 555) [f] 2748 29.4       8 <A HREF="#b21537">align</A>
<a onClick="window.open('getRecord.php?id=b24046',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24046" target=_"blank">b24046</a> APGG01000039 Vibrio cholerae O1 str. PC ( 555) [f] 2739 29.4     8.3 <A HREF="#b24046">align</A>
<a onClick="window.open('getRecord.php?id=b24071',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24071" target=_"blank">b24071</a> APFM01000042 Vibrio cholerae O1 str. 95 ( 555) [f] 2739 29.4     8.3 <A HREF="#b24071">align</A>
<a onClick="window.open('getRecord.php?id=b23721',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23721" target=_"blank">b23721</a> NZ_AHGP01000049 Vibrio cholerae O1 str. ( 555) [f] 2739 29.4     8.3 <A HREF="#b23721">align</A>
<a onClick="window.open('getRecord.php?id=b20668',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20668" target=_"blank">b20668</a> ALDR01000074 Vibrio cholerae HC-47A1    ( 555) [f] 2739 29.4     8.3 <A HREF="#b20668">align</A>
</pre><p><hr><p>

>>>b13674, 555 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b20678>
<pre>
>><a onClick="window.open('getRecord.php?id=b20678',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20678" target=_"blank">b20678</a> ALEC01000003 Vibrio cholerae HE-25               (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 106.8  bits: 29.6 E():  7.2
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20678 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b20678 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b19314>
<pre>
>><a onClick="window.open('getRecord.php?id=b19314',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19314" target=_"blank">b19314</a> AFOQ01000008 Vibrio cholerae HE39                (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 106.6  bits: 29.5 E():  7.5
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19314 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19314 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19314 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19314 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19314 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19314 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b19314 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19314 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19314 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b19314 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b21336>
<pre>
>><a onClick="window.open('getRecord.php?id=b21336',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21336" target=_"blank">b21336</a> AJRX01000032 Vibrio cholerae HE-40               (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 106.6  bits: 29.5 E():  7.5
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21336 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21336 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21336 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21336 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21336 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21336 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b21336 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21336 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21336 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b21336 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b21334>
<pre>
>><a onClick="window.open('getRecord.php?id=b21334',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21334" target=_"blank">b21334</a> AJRY01000032 Vibrio cholerae HE-46               (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 106.6  bits: 29.5 E():  7.5
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21334 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21334 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21334 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21334 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21334 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21334 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b21334 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21334 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21334 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b21334 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b24040>
<pre>
>><a onClick="window.open('getRecord.php?id=b24040',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24040" target=_"blank">b24040</a> APFY01000051 Vibrio cholerae O1 str. EM-1676A    (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 106.3  bits: 29.5 E():  7.7
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24040 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24040 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24040 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24040 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
b24040 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTTTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24040 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b24040 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24040 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24040 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b24040 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b19363>
<pre>
>><a onClick="window.open('getRecord.php?id=b19363',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19363" target=_"blank">b19363</a> AFOP01000160 Vibrio cholerae HE-09               (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 106.3  bits: 29.5 E():  7.7
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19363 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19363 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19363 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19363 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19363 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19363 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b19363 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b19363 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCTCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19363 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b19363 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b24077>
<pre>
>><a onClick="window.open('getRecord.php?id=b24077',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24077" target=_"blank">b24077</a> APFK01000078 Vibrio cholerae O1 str. 116063      (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b24077 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24077 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24077 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24077 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24077 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24077 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b24077 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       :::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
b24077 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCCCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24077 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b24077 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b10374>
<pre>
>><a onClick="window.open('getRecord.php?id=b10374',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10374" target=_"blank">b10374</a> NZ_AAWG01000058 Vibrio cholerae 623-39           (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b10374 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10374 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10374 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10374 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
b10374 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTTTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10374 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b10374 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10374 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10374 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b10374 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b23740>
<pre>
>><a onClick="window.open('getRecord.php?id=b23740',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23740" target=_"blank">b23740</a> NZ_AFSV01000029 Vibrio cholerae O1 str. Amazoni  (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b23740 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23740 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23740 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23740 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23740 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23740 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b23740 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       :::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
b23740 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCCCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23740 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b23740 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b24075>
<pre>
>><a onClick="window.open('getRecord.php?id=b24075',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24075" target=_"blank">b24075</a> APFL01000048 Vibrio cholerae O1 str. 87395       (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24075 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b24075 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTAGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24075 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24075 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24075 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24075 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       : ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b24075 TCTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24075 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24075 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b24075 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b10336>
<pre>
>><a onClick="window.open('getRecord.php?id=b10336',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10336" target=_"blank">b10336</a> DS265224 Vibrio cholerae AM-19226                (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b10336 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10336 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10336 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b10336 GCTAATAGCGATCACGCGATCGGTGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10336 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10336 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b10336 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10336 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10336 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b10336 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b21466>
<pre>
>><a onClick="window.open('getRecord.php?id=b21466',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21466" target=_"blank">b21466</a> ALEB01000055 Vibrio cholerae HE-16               (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21466 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b21466 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTAGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21466 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21466 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21466 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21466 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       : ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b21466 TCTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21466 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21466 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b21466 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b19311>
<pre>
>><a onClick="window.open('getRecord.php?id=b19311',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19311" target=_"blank">b19311</a> AFOR01000005 Vibrio cholerae HE48                (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19311 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19311 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19311 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19311 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19311 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19311 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b19311 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       :::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
b19311 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCCCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
b19311 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTTGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b19311 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b21352>
<pre>
>><a onClick="window.open('getRecord.php?id=b21352',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21352" target=_"blank">b21352</a> AJRP01000038 Vibrio cholerae HC-41B1             (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b21352 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21352 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
b21352 CACCAACTGGCTAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21352 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21352 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21352 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b21352 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21352 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21352 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b21352 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b23554>
<pre>
>><a onClick="window.open('getRecord.php?id=b23554',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23554" target=_"blank">b23554</a> NZ_AMBR01000005   Vibrio cholerae VC35           (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23554 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23554 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23554 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23554 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23554 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23554 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b23554 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       :::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
b23554 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCCCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
b23554 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTTGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b23554 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b21537>
<pre>
>><a onClick="window.open('getRecord.php?id=b21537',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21537" target=_"blank">b21537</a> AJSK01000036 Vibrio cholerae HC-44C1             (555 nt)
 initn: 2748 init1: 2748 opt: 2748  Z-score: 106.0  bits: 29.4 E():    8
banded Smith-Waterman score: 2748; 99.5% identity (99.5% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b21537 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21537 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
b21537 CACCAACTGGCTAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21537 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21537 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21537 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b21537 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21537 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21537 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b21537 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b24046>
<pre>
>><a onClick="window.open('getRecord.php?id=b24046',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24046" target=_"blank">b24046</a> APGG01000039 Vibrio cholerae O1 str. PCS-023     (555 nt)
 initn: 2739 init1: 2739 opt: 2739  Z-score: 105.8  bits: 29.4 E():  8.3
banded Smith-Waterman score: 2739; 99.3% identity (99.3% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b24046 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24046 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24046 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b24046 GCTAATAGCGATCACGCGATCGGTGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
b24046 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTTTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24046 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b24046 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24046 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24046 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b24046 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b24071>
<pre>
>><a onClick="window.open('getRecord.php?id=b24071',
                                'cpndb_record'); return false;" href="getRecord.php?id=b24071" target=_"blank">b24071</a> APFM01000042 Vibrio cholerae O1 str. 95412       (555 nt)
 initn: 2739 init1: 2739 opt: 2739  Z-score: 105.8  bits: 29.4 E():  8.3
banded Smith-Waterman score: 2739; 99.3% identity (99.3% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b24071 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24071 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24071 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b24071 GCTAATAGCGATCACGCGATCGGTGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
b24071 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTTTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24071 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b24071 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24071 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b24071 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b24071 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b23721>
<pre>
>><a onClick="window.open('getRecord.php?id=b23721',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23721" target=_"blank">b23721</a> NZ_AHGP01000049 Vibrio cholerae O1 str. 3582-05  (555 nt)
 initn: 2739 init1: 2739 opt: 2739  Z-score: 105.8  bits: 29.4 E():  8.3
banded Smith-Waterman score: 2739; 99.3% identity (99.3% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b23721 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23721 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23721 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b23721 GCTAATAGCGATCACGCGATCGGTGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
b23721 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTTTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23721 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b23721 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23721 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23721 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b23721 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<A name=b20668>
<pre>
>><a onClick="window.open('getRecord.php?id=b20668',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20668" target=_"blank">b20668</a> ALDR01000074 Vibrio cholerae HC-47A1             (555 nt)
 initn: 2739 init1: 2739 opt: 2739  Z-score: 105.8  bits: 29.4 E():  8.3
banded Smith-Waterman score: 2739; 99.3% identity (99.3% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13674 GCAACCGTGTTGGCCCAAGCGTTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
b20668 GCAACCGTGTTGGCCCAAGCGCTGATCAATGAAGGGATGAAGGCGGTCGCCGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13674 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20668 AACCCCATGGATCTTAAGCGCGGTATCGACAAAGCAGTCTCCGCAGCGGTCGAGAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13674 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20668 CACCAACTGGCCAAACCTTGCAGTGACACCCAATCGATCACTCAAGTCGGTGCCATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13674 GCTAATAGCGATCACGCGATCGGCGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b20668 GCTAATAGCGATCACGCGATCGGTGAAATCATCGCGCAAGCGATGGAGAAAGTTGGCCGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b13674 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTCTCGGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
b20668 AATGGTGTGATCACGGTTGAAGAGGGACAAGCTCTACAAAACGAGCTTTCGGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13674 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20668 GGTATGCAATTTGATCGCGGTTACCTTTCCCCTTACTTCATCAACCAACCCAAAGCGGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13674 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCATATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b20668 TGTGTTGAGTTGGAGAATCCCTACGTCTTGCTAGTAGACAAGAAAATCAGCCACATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b13674 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20668 GAACTGCTACCGATTTTAGAATCCGTGGCTAAAGCTTCCCGTTCGCTGCTGATCATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13674 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20668 GAAGATGTGGATGGCGATGCGCTTGCGACATTAGTGGTTAACAGCATGCGTGGCATCATT
              490       500       510       520       530       540

              550     
b13674 AAAGTGGCAGCGGTG
       :::::::::::::::
b20668 AAAGTGGCAGCGGTG
              550     

</pre>
<hr>
<p><pre>


555 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Apr 22 02:06:12 2024 done: Mon Apr 22 02:06:14 2024
 Total Scan time:  1.440 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>