/data/www/cpndb/fasta_results/b15299.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b15299 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b15299
<pre>
  1>>>b15299 552 nt - 552 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0027;  K=9.996e-06 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  1.550
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b14528',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14528" target=_"blank">b14528</a> NZ_ABKK02000005 Clostridioides difficil ( 552) [f] 2760 27.3      34 <A HREF="#b14528">align</A>
<a onClick="window.open('getRecord.php?id=b27751',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27751" target=_"blank">b27751</a> AVMF01000006 Peptoclostridium  difficil ( 552) [f] 2760 27.3      34 <A HREF="#b27751">align</A>
<a onClick="window.open('getRecord.php?id=b20076',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20076" target=_"blank">b20076</a> AGAC01000017 Clostridioides difficile 7 ( 552) [f] 2733 27.2      36 <A HREF="#b20076">align</A>
<a onClick="window.open('getRecord.php?id=b28035',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28035" target=_"blank">b28035</a> NZ_AVMZ01000006 Peptoclostridium  diffi ( 552) [f] 2733 27.2      36 <A HREF="#b28035">align</A>
<a onClick="window.open('getRecord.php?id=b27963',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27963" target=_"blank">b27963</a> AWZO01000012 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27963">align</A>
<a onClick="window.open('getRecord.php?id=b27964',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27964" target=_"blank">b27964</a> AWZH01000016 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27964">align</A>
<a onClick="window.open('getRecord.php?id=b27752',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27752" target=_"blank">b27752</a> AVME01000009 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27752">align</A>
<a onClick="window.open('getRecord.php?id=b27749',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27749" target=_"blank">b27749</a> AVHH01000023 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27749">align</A>
<a onClick="window.open('getRecord.php?id=b27962',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27962" target=_"blank">b27962</a> AWZN01000009 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27962">align</A>
<a onClick="window.open('getRecord.php?id=b27750',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27750" target=_"blank">b27750</a> AVHO01000072 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27750">align</A>
<a onClick="window.open('getRecord.php?id=b27754',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27754" target=_"blank">b27754</a> AVHM01000023 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27754">align</A>
<a onClick="window.open('getRecord.php?id=b28036',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28036" target=_"blank">b28036</a> NZ_AVMM01000006 Peptoclostridium  diffi ( 552) [f] 2733 27.2      36 <A HREF="#b28036">align</A>
<a onClick="window.open('getRecord.php?id=b28057',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28057" target=_"blank">b28057</a> CAMY01000035 Clostridioides difficile   ( 552) [f] 2733 27.2      36 <A HREF="#b28057">align</A>
<a onClick="window.open('getRecord.php?id=b7492',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7492" target=_"blank">b7492</a> AY922372 Clostridioides difficile ATCC 9 ( 552) [f] 2733 27.2      36 <A HREF="#b7492">align</A>
<a onClick="window.open('getRecord.php?id=b28597',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28597" target=_"blank">b28597</a> NZ_MOSV01000092 Clostridioides difficil ( 552) [f] 2733 27.2      36 <A HREF="#b28597">align</A>
<a onClick="window.open('getRecord.php?id=b27753',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27753" target=_"blank">b27753</a> AVHJ01000040 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27753">align</A>
<a onClick="window.open('getRecord.php?id=b27756',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27756" target=_"blank">b27756</a> AVHI01000022 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27756">align</A>
<a onClick="window.open('getRecord.php?id=b28053',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28053" target=_"blank">b28053</a> CANC01000124 Clostridioides difficile   ( 552) [f] 2733 27.2      36 <A HREF="#b28053">align</A>
<a onClick="window.open('getRecord.php?id=b28034',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28034" target=_"blank">b28034</a> NZ_AVNA01000005 Peptoclostridium  diffi ( 552) [f] 2733 27.2      36 <A HREF="#b28034">align</A>
<a onClick="window.open('getRecord.php?id=b27961',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27961" target=_"blank">b27961</a> AWZM01000017 Peptoclostridium  difficil ( 552) [f] 2733 27.2      36 <A HREF="#b27961">align</A>
</pre><p><hr><p>

>>>b15299, 552 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b14528>
<pre>
>><a onClick="window.open('getRecord.php?id=b14528',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14528" target=_"blank">b14528</a> NZ_ABKK02000005 Clostridioides difficile CIP 10  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.8  bits: 27.3 E():   34
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b14528 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b14528 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27751>
<pre>
>><a onClick="window.open('getRecord.php?id=b27751',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27751" target=_"blank">b27751</a> AVMF01000006 Peptoclostridium  difficile  P31    (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.8  bits: 27.3 E():   34
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27751 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27751 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b20076>
<pre>
>><a onClick="window.open('getRecord.php?id=b20076',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20076" target=_"blank">b20076</a> AGAC01000017 Clostridioides difficile 70-100-20  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20076 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b20076 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20076 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20076 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20076 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20076 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b20076 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20076 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20076 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b20076 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b28035>
<pre>
>><a onClick="window.open('getRecord.php?id=b28035',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28035" target=_"blank">b28035</a> NZ_AVMZ01000006 Peptoclostridium  difficile  P7  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28035 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b28035 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28035 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28035 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28035 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28035 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b28035 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28035 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28035 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b28035 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27963>
<pre>
>><a onClick="window.open('getRecord.php?id=b27963',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27963" target=_"blank">b27963</a> AWZO01000012 Peptoclostridium  difficile  P53    (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27963 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27963 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27963 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27963 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27963 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27963 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27963 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27963 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27963 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27963 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27964>
<pre>
>><a onClick="window.open('getRecord.php?id=b27964',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27964" target=_"blank">b27964</a> AWZH01000016 Peptoclostridium  difficile  DA001  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27964 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27964 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27964 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27964 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27964 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27964 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27964 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27964 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27964 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27964 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27752>
<pre>
>><a onClick="window.open('getRecord.php?id=b27752',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27752" target=_"blank">b27752</a> AVME01000009 Peptoclostridium  difficile  P30    (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27752 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27752 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27752 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27752 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27752 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27752 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27752 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27752 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27752 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27752 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27749>
<pre>
>><a onClick="window.open('getRecord.php?id=b27749',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27749" target=_"blank">b27749</a> AVHH01000023 Peptoclostridium  difficile  CD88   (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27749 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27749 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27749 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27749 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27749 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27749 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27749 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27749 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27749 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27749 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27962>
<pre>
>><a onClick="window.open('getRecord.php?id=b27962',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27962" target=_"blank">b27962</a> AWZN01000009 Peptoclostridium  difficile  F665   (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27962 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27962 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27962 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27962 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27962 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27962 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27962 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27962 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27962 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27962 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27750>
<pre>
>><a onClick="window.open('getRecord.php?id=b27750',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27750" target=_"blank">b27750</a> AVHO01000072 Peptoclostridium  difficile  CD127  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27750 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27750 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27750 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27750 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27750 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27750 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27750 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27750 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27750 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27750 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27754>
<pre>
>><a onClick="window.open('getRecord.php?id=b27754',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27754" target=_"blank">b27754</a> AVHM01000023 Peptoclostridium  difficile  CD111  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27754 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27754 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27754 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27754 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27754 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27754 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27754 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27754 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27754 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27754 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b28036>
<pre>
>><a onClick="window.open('getRecord.php?id=b28036',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28036" target=_"blank">b28036</a> NZ_AVMM01000006 Peptoclostridium  difficile  P4  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28036 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b28036 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28036 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28036 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28036 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28036 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b28036 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28036 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28036 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b28036 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b28057>
<pre>
>><a onClick="window.open('getRecord.php?id=b28057',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28057" target=_"blank">b28057</a> CAMY01000035 Clostridioides difficile  E23       (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28057 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b28057 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28057 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28057 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28057 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28057 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b28057 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28057 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28057 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b28057 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b7492>
<pre>
>><a onClick="window.open('getRecord.php?id=b7492',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7492" target=_"blank">b7492</a> AY922372 Clostridioides difficile ATCC 9689D      (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7492  GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b7492  AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7492  AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7492  GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7492  GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7492  ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b7492  GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7492  TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7492  GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b7492  GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b28597>
<pre>
>><a onClick="window.open('getRecord.php?id=b28597',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28597" target=_"blank">b28597</a> NZ_MOSV01000092 Clostridioides difficile 01A09C  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28597 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b28597 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28597 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28597 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28597 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28597 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b28597 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28597 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28597 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b28597 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27753>
<pre>
>><a onClick="window.open('getRecord.php?id=b27753',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27753" target=_"blank">b27753</a> AVHJ01000040 Peptoclostridium  difficile  CD92   (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27753 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27753 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27753 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27753 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27753 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27753 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27753 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27753 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27753 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27753 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27756>
<pre>
>><a onClick="window.open('getRecord.php?id=b27756',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27756" target=_"blank">b27756</a> AVHI01000022 Peptoclostridium  difficile  CD90   (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27756 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27756 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27756 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27756 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27756 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27756 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27756 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27756 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27756 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27756 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b28053>
<pre>
>><a onClick="window.open('getRecord.php?id=b28053',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28053" target=_"blank">b28053</a> CANC01000124 Clostridioides difficile  T14       (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28053 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b28053 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28053 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28053 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28053 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28053 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b28053 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28053 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28053 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b28053 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b28034>
<pre>
>><a onClick="window.open('getRecord.php?id=b28034',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28034" target=_"blank">b28034</a> NZ_AVNA01000005 Peptoclostridium  difficile  P7  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28034 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b28034 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28034 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28034 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28034 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28034 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b28034 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28034 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28034 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b28034 GTAGTAGCAGTT
              550  

</pre>
<hr>
<A name=b27961>
<pre>
>><a onClick="window.open('getRecord.php?id=b27961',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27961" target=_"blank">b27961</a> AWZM01000017 Peptoclostridium  difficile  P68    (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 94.2  bits: 27.2 E():   36
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15299 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27961 GCTACAGTTTTAGCACAAGCTATAATAAGAGAAGGTTTAAAGAATGTAACAGCAGGGGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b15299 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAATAGTAGCGGTAGAAGAATTA
       :::::::::::::::::::::::::::::::::::::::: :::::: ::::::::::::
b27961 AACCCAATACTTTTAAGAAAAGGAATACAAAAAGCAGTAACAGTAGCAGTAGAAGAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b15299 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27961 AAAAATCAATCAAGAATAGTAGAAACACAAGAGGCTATATCTCAAGTTGCTTCTATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15299 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27961 GCTGGTGATGAAGAAGTTGGAAAATTAATAGCAGAAGCTATGGAAATAGTAGGTAAAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b15299 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27961 GGAGTTATAACTGTTGAAGAGTCTCAAACTATGAATACTGAATTAGATGCTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b15299 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27961 ATGCAGTTTGATAGAGGATTTGTTTCTGCATATATGGTTACAGATGTAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b15299 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAGAAAATATCTAACATACAAGAA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27961 GCAGTTTTAAATGACCCATATATATTAATTACTGATAAAAAAATATCTAACATACAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15299 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27961 TTATTACCAGTTCTTGAACAAATAGTTCAACAAGGTAAAAAGTTATTGATAATAGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15299 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27961 GATGTAGAAGGTGAAGCATTATCTACATTAGTAGTAAATAAATTAAGAGGAACATTTGAT
              490       500       510       520       530       540

              550  
b15299 GTAGTAGCAGTT
       ::::::::::::
b27961 GTAGTAGCAGTT
              550  

</pre>
<hr>
<p><pre>


552 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Apr 22 02:28:25 2024 done: Mon Apr 22 02:28:27 2024
 Total Scan time:  1.550 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>