/data/www/cpndb/fasta_results/b16822.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b16822 /data/www/cpndb/blastDBs/reference_a_nut
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: /data/www/cpndb/fasta_results/b16822
  1>>>b16822 552 nt - 552 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0025;  K=1.2e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  1.400



The best scores are:                                      opt bits E(18820)
b32134 NZ_MWXD01000011 Mycobacterium  caprae   ( 552) [f] 2760 26.2      75 align
b23029 NC_020245 Mycobacterium bovis BCG str.  ( 552) [f] 2760 26.2      75 align
b10193 CP000611 Mycobacterium tuberculosis H37 ( 552) [f] 2760 26.2      75 align
b19373 AM412059 Mycobacterium bovis BCG str. M ( 552) [f] 2760 26.2      75 align
b19937 CP002095 Mycobacterium bovis BCG str. M ( 552) [f] 2760 26.2      75 align
b18779 GL877853 Mycobacterium tuberculosis W-1 ( 552) [f] 2760 26.2      75 align
b4155 NC_002945 Mycobacterium bovis subsp. bov ( 552) [f] 2760 26.2      75 align
b7801 NZ_AAKR01000007 Mycobacterium tuberculos ( 552) [f] 2760 26.2      75 align
b32131 NZ_MWXB01000053 Mycobacterium  pinniped ( 552) [f] 2760 26.2      75 align
b20547 AP012340 Mycobacterium tuberculosis Erd ( 552) [f] 2760 26.2      75 align
b28238 NZ_AVSW01000022 Mycobacterium  bovis  0 ( 552) [f] 2760 26.2      75 align
b10021 NC_008769 Mycobacterium bovis BCG str.  ( 552) [f] 2760 26.2      75 align
b1092 M15467 Mycobacterium tuberculosis strain ( 552) [f] 2760 26.2      75 align
b19301 CP001642  Mycobacterium tuberculosis CC ( 552) [f] 2760 26.2      75 align
b26317 NC_021193 Mycobacterium tuberculosis CA ( 552) [f] 2760 26.2      75 align
b7723 CP000717 Mycobacterium tuberculosis F11  ( 552) [f] 2760 26.2      75 align
b22769 HE663067 Mycobacterium tuberculosis 719 ( 552) [f] 2760 26.2      75 align
b19508 CP002992  Mycobacterium tuberculosis CT ( 552) [f] 2760 26.2      75 align
b22770 HE663067 Mycobacterium tuberculosis 719 ( 552) [f] 2760 26.2      75 align
b20490 CP003234 Mycobacterium tuberculosis RGT ( 552) [f] 2760 26.2      75 align


>>>b16822, 552 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

>>b32134 NZ_MWXD01000011 Mycobacterium  caprae  ATCC BAA  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32134 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b32134 TCGGTGGCGGTC 550


>>b23029 NC_020245 Mycobacterium bovis BCG str. Korea 11  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b23029 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b23029 TCGGTGGCGGTC 550


>>b10193 CP000611 Mycobacterium tuberculosis H37Ra        (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10193 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b10193 TCGGTGGCGGTC 550


>>b19373 AM412059 Mycobacterium bovis BCG str. Moreau RD  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19373 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b19373 TCGGTGGCGGTC 550


>>b19937 CP002095 Mycobacterium bovis BCG str. Mexico     (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19937 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b19937 TCGGTGGCGGTC 550


>>b18779 GL877853 Mycobacterium tuberculosis W-148        (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18779 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b18779 TCGGTGGCGGTC 550


>>b4155 NC_002945 Mycobacterium bovis subsp. bovis AF212  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b4155 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b4155 TCGGTGGCGGTC 550


>>b7801 NZ_AAKR01000007 Mycobacterium tuberculosis C      (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7801 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b7801 TCGGTGGCGGTC 550


>>b32131 NZ_MWXB01000053 Mycobacterium  pinnipedii  ATCC  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b32131 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b32131 TCGGTGGCGGTC 550


>>b20547 AP012340 Mycobacterium tuberculosis Erdman ATCC  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20547 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b20547 TCGGTGGCGGTC 550


>>b28238 NZ_AVSW01000022 Mycobacterium  bovis  04-303     (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b28238 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b28238 TCGGTGGCGGTC 550


>>b10021 NC_008769 Mycobacterium bovis BCG str. Pasteur   (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b10021 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b10021 TCGGTGGCGGTC 550


>>b1092 M15467 Mycobacterium tuberculosis strain Erdman   (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b1092 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b1092 TCGGTGGCGGTC 550


>>b19301 CP001642  Mycobacterium tuberculosis CCDC5180    (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19301 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b19301 TCGGTGGCGGTC 550


>>b26317 NC_021193 Mycobacterium tuberculosis CAS/NITR20  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b26317 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b26317 TCGGTGGCGGTC 550


>>b7723 CP000717 Mycobacterium tuberculosis F11           (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7723 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b7723 TCGGTGGCGGTC 550


>>b22769 HE663067 Mycobacterium tuberculosis 7199-99      (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22769 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b22769 TCGGTGGCGGTC 550


>>b19508 CP002992  Mycobacterium tuberculosis CTRI-2      (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19508 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b19508 TCGGTGGCGGTC 550


>>b22770 HE663067 Mycobacterium tuberculosis 7199-99      (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22770 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b22770 TCGGTGGCGGTC 550


>>b20490 CP003234 Mycobacterium tuberculosis RGTB423      (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 88.7  bits: 26.2 E():   75
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b16822 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 GCCACCGTGCTGGCCCAGGCGTTGGTTCGCGAGGGCCTGCGCAACGTCGCGGCCGGCGCC 10 20 30 40 50 60 70 80 90 100 110 120 b16822 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 AACCCGCTCGGTCTCAAACGCGGCATCGAAAAGGCCGTGGAGAAGGTCACCGAGACCCTG 70 80 90 100 110 120 130 140 150 160 170 180 b16822 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 CTCAAGGGCGCCAAGGAGGTCGAGACCAAGGAGCAGATTGCGGCCACCGCAGCGATTTCG 130 140 150 160 170 180 190 200 210 220 230 240 b16822 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 GCGGGTGACCAGTCCATCGGTGACCTGATCGCCGAGGCGATGGACAAGGTGGGCAACGAG 190 200 210 220 230 240 250 260 270 280 290 300 b16822 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 GGCGTCATCACCGTCGAGGAGTCCAACACCTTTGGGCTGCAGCTCGAGCTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b16822 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 ATGCGGTTCGACAAGGGCTACATCTCGGGGTACTTCGTGACCGACCCGGAGCGTCAGGAG 310 320 330 340 350 360 370 380 390 400 410 420 b16822 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 GCGGTCCTGGAGGACCCCTACATCCTGCTGGTCAGCTCCAAGGTGTCCACTGTCAAGGAT 370 380 390 400 410 420 430 440 450 460 470 480 b16822 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 CTGCTGCCGCTGCTCGAGAAGGTCATCGGAGCCGGTAAGCCGCTGCTGATCATCGCCGAG 430 440 450 460 470 480 490 500 510 520 530 540 b16822 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20490 GACGTCGAGGGCGAGGCGCTGTCCACCCTGGTCGTCAACAAGATCCGCGGCACCTTCAAG 490 500 510 520 530 540 550 b16822 TCGGTGGCGGTC :::::::::::: b20490 TCGGTGGCGGTC 550




552 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Apr 29 02:56:17 2024 done: Mon Apr 29 02:56:19 2024
 Total Scan time:  1.400 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]