Chaperonin ID: | b10827 |
Chaperonin Group: | I |
Deposit Date: | 2008-02-28 |
Type: | ref |
Type strain?: | no |
Genus: | Salmonella |
Species: | enterica |
Strain: | subsp. enterica serovar Schwarzengrund str. CVM19633 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NC_011094 |
Peptide Genbank Accession: | YP_002117276 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | The Schwarzengrund serovar is the predominant cause of salmonellosis in Southeast Asia, a major source of imported food products to the United States. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the U.S.. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. Strain CVM19633 is a multi-drug resistant isolate. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGTGTGAAAATGCTGCGCGGCGTA AACGTACTGGCAGATGCAGTGAAAGTAACCCTCGGTCCGAAAGGCCGTAACGTGGTTCTG GATAAATCTTTCGGTGCGCCGACTATCACTAAAGATGGTGTTTCCGTAGCGCGTGAAATC GAGCTGGAAGACAAGTTTGAAAACATGGGCGCGCAGATGGTGAAAGAAGTTGCCTCTAAA GCGAACGACGCTGCAGGCGACGGCACCACCACCGCGACCGTACTGGCGCAGTCCATCATT ACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTATC GACAAAGCGGTTGCTGCTGCGGTTGAAGAGCTGAAAGCCCTGTCCGTACCGTGCTCCGAC TCTAAAGCGATTGCTCAGGTAGGTACTATCTCCGCTAACTCCGACGAAACCGTAGGTAAA CTGATCGCGGAAGCGATGGATAAAGTCGGTAAAGAAGGCGTCATCACCGTTGAAGACGGT ACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTTGACCGCGGCTACCTG TCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAGCTGGAAAGCCCGTTCATC CTGCTGGCTGATAAGAAAATCTCCAACATCCGCGAAATGCTGCCGGTTCTGGAAGCCGTT GCAAAAGCAGGCAAACCGCTGCTGATCATCGCTGAAGATGTTGAAGGCGAAGCGCTGGCT ACCCTGGTTGTTAACACCATGCGTGGCATCGTGAAAGTGGCTGCGGTTAAGGCACCTGGC TTCGGCGATCGTCGTAAAGCAATGCTGCAGGATATCGCTACCCTGACCGGCGGTACCGTA ATCTCTGAAGAGATCGGTATGGAGCTGGAAAAAGCAACCCTGGAAGACCTGGGTCAGGCG AAACGCGTTGTGATCAACAAAGACACCACCACCATCATCGATGGCGTGGGTGAAGAAGCT GCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCGACCTCCGACTAC GATCGTGAAAAACTGCAGGAGCGCGTAGCGAAACTGGCAGGCGGCGTTGCGGTTATCAAA GTTGGCGCTGCGACCGAAGTTGAAATGAAAGAGAAGAAAGCCCGCGTTGAAGATGCCCTG CACGCGACCCGTGCTGCGGTAGAAGAAGGCGTGGTTGCTGGTGGTGGCGTTGCGCTGATC CGCGTTGCTTCTAAAATTGCTGACCTGAAAGGCCAGAACGAAGACCAGAACGTGGGTATC AAAGTTGCGCTGCGCGCAATGGAAGCTCCGCTGCGTCAGATCGTGCTGAACTGCGGCGAA GAGCCGTCTGTTGTCGCTAACACCGTTAAAGGCGGCGACGGTAACTACGGTTACAACGCA GCAACTGAAGAATACGGCAACATGATCGATATGGGTATCCTGGACCCAACCAAAGTTACC CGTTCTGCGCTGCAGTACGCGGCTTCAGTGGCTGGTCTGATGATCACTACCGAGTGCATG GTGACCGACCTGCCGAAAAGCGATGCTCCTGATTTAGGCGCTGCTGGCGGCATGGGTGGT ATGGGTGGTATGGGCGGCATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI DKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RVASKIADLKGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGAAGGMGG MGGMGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCTGCGGTTGAAGAGCTG AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG AAAGTGGCTGCGGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTIS ANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETG AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |