RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b27104 |
| Chaperonin Group: | I |
| Deposit Date: | 2016-01-08 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Candidatus Phytoplasma |
| Species: | asteris |
| Strain: | Grey dogwood stunt phytoplasma (GD) |
| Lineage: | root; cellular organisms; Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma asteris |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AB599694 |
| Peptide Genbank Accession: | BAL68187 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | other |
| Notes: | 16SrI-A, cpn60UT I-IIA, USA |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGAGTAAAAAAATACTTTATGGCAAAGAAGCAAGAAAAGCTTTATTACAAGGAGTAGAT GCAATTGCAAATACTGTTAAAGTGACTTTAGGACCTAAAGGACGTAATGTTATTTTAGAA AAAGCCTACGAGTCACCTGCTATTGTAAATGATGGTGTTTCTATTGCAAAAGAAATTGAA TTAAAAAATCCTTATCAAAATATGGGAGCAAAATTAGTATATGAAGTAGCTTCTAAAACT AACGATAAAGCAGGAGATGGAACAACTACAGCAACTGTTTTGGCACAAAGTATGATTCAT CGTGGTTTTGATGCAATTGATGCAGGAGCTAATCCTGTTTTAGTAAAAGAAGGAATTGAG TTAACTTCATTAACAGTTGCCAAAAAACTTTTAGCTAAATCTAAAAAAGTAGACGTCCAA GAAGATATTCAAAATGTGGCTTCTGTTTCATCAGGTAGTCAAGAAATTGGTAAAATCATT GCCCAAGCGATGCAAAAAGTAGGTAAAGATGGAGTTATTAATGTTGATGAATCTAAAGGT TTTGAAACAGAATTAGAAGTTGTTGAAGGATTGCAATACGATAAAGGATATGCTTCTCCT TATTTTGTCTCTGATAGAGAAAGTATGACAGTACATTTAGAAAATGCGTTGGTTTTAGTA ACTGATCATAAAATTAGTACTGTGCAAGAAATTGTACCTATTTTGGAAGAAGTAGTAAAA GCATCTAGACCTTTGTTAATTGTAGCTGAAGCAGTGGAAAATGAAGTTTTAGGGGTTTTG GTAGCTAATAAATTAAGAGGAACTTTTAATGTAGTTGTAACTAATGCTCCTGGTTTTGGT GATAATCAAAAAGAAATGTTAAAAGATATTGCAGTACTTACAAAAGCTAATTTTGTTTTT AAAGAGCTTAATATGAAATTAGCAGATTTAAAAATGGATGATTTAGGAAATATCAATAAA GTTATTATTAAAAAAGATAATACTACTTTGATAAGTAATTCTAAAAGTCCTGAATTAGAA AAACGTATTCAAGTATTAAAAACCCAAATTAAAAATTCTACTTCTGATTATGAAACTAAA AATTTGCAAGAAAGATTAGCTAAATTATCAGGAGGAGTTGCCTTAATTAAAGTTGGGGCC GCAACTGATACTGAATTAAAAGATAAAAAATTACGTATTGAAGATGCTCTTAATGCTACT AAAGCTGCTATTACTGAAGGAATTGTAGTTGGTGGTGGAAAAGCTTTAGTTGAGGTTTAT CAAGAATTAAAAGATACTTTAATATCTGATAATAAAGAAGTACAACAAGGAATTGATGTA GTAGTACAAAGTCTTTTAGTACCTACTTATCAAATTGCTTATAATGCAGGATTTTCAGGT AAAGATGTAGTAAAACAACAACTTTTACAACCCTTAAATTTTGGTTTTAATGCTAAAGAA GGTAATTATGTTTGTCTCTTAAAAGAAGGCATAATTGATCCTACTAAAGTAACTCGTCAA GCTGTTCTTAATGCTGCTTCTATCTCTGCTTTGATGATTACAACTGAGGCTGCTGTGGTA AGTTTAAAAGAAAATAAAGATAATAACTTTGATTTAGGGACACAAGAATAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MSKKILYGKEARKALLQGVDAIANTVKVTLGPKGRNVILEKAYESPAIVNDGVSIAKEIE LKNPYQNMGAKLVYEVASKTNDKAGDGTTTATVLAQSMIHRGFDAIDAGANPVLVKEGIE LTSLTVAKKLLAKSKKVDVQEDIQNVASVSSGSQEIGKIIAQAMQKVGKDGVINVDESKG FETELEVVEGLQYDKGYASPYFVSDRESMTVHLENALVLVTDHKISTVQEIVPILEEVVK ASRPLLIVAEAVENEVLGVLVANKLRGTFNVVVTNAPGFGDNQKEMLKDIAVLTKANFVF KELNMKLADLKMDDLGNINKVIIKKDNTTLISNSKSPELEKRIQVLKTQIKNSTSDYETK NLQERLAKLSGGVALIKVGAATDTELKDKKLRIEDALNATKAAITEGIVVGGGKALVEVY QELKDTLISDNKEVQQGIDVVVQSLLVPTYQIAYNAGFSGKDVVKQQLLQPLNFGFNAKE GNYVCLLKEGIIDPTKVTRQAVLNAASISALMITTEAAVVSLKENKDNNFDLGTQE |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTTTTGGCACAAAGTATGATTCATCGTGGTTTTGATGCAATTGATGCAGGAGCT AATCCTGTTTTAGTAAAAGAAGGAATTGAGTTAACTTCATTAACAGTTGCCAAAAAACTT TTAGCTAAATCTAAAAAAGTAGACGTCCAAGAAGATATTCAAAATGTGGCTTCTGTTTCA TCAGGTAGTCAAGAAATTGGTAAAATCATTGCCCAAGCGATGCAAAAAGTAGGTAAAGAT GGAGTTATTAATGTTGATGAATCTAAAGGTTTTGAAACAGAATTAGAAGTTGTTGAAGGA TTGCAATACGATAAAGGATATGCTTCTCCTTATTTTGTCTCTGATAGAGAAAGTATGACA GTACATTTAGAAAATGCGTTGGTTTTAGTAACTGATCATAAAATTAGTACTGTGCAAGAA ATTGTACCTATTTTGGAAGAAGTAGTAAAAGCATCTAGACCTTTGTTAATTGTAGCTGAA GCAGTGGAAAATGAAGTTTTAGGGGTTTTGGTAGCTAATAAATTAAGAGGAACTTTTAAT GTAGTTGTAACT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSMIHRGFDAIDAGANPVLVKEGIELTSLTVAKKLLAKSKKVDVQEDIQNVASVS SGSQEIGKIIAQAMQKVGKDGVINVDESKGFETELEVVEGLQYDKGYASPYFVSDRESMT VHLENALVLVTDHKISTVQEIVPILEEVVKASRPLLIVAEAVENEVLGVLVANKLRGTFN VVVT |