RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b16928 |
| Chaperonin Group: | I |
| Deposit Date: | 2010-05-23 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Bifidobacterium |
| Species: | longum |
| Strain: | subsp. longum JDM301 |
| Lineage: | root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria (class); Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002010 |
| Peptide Genbank Accession: | ADH00921 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Reference genome from the Human Microbiome Project. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGATCATCTCTTATGATGAGGAAGCCCGTCAGGGCATGCTGGAGGGCCTTGAC AAGCTCGCCAACACCGTCAAGGTCACCTTGGGCCCGAAGGGCCGCAACGTCGTGCTCGAC AAGACCTACGGCGCTCCGACCATCACCAACGATGGCGTGTCCATCGCCAAGGAAATCGAC CTTGAAGACCCGTACGAGCGCATCGGCGCCGAGCTGGTCAAGGAAGTCGCCAAGAAGACC GACGACGTCGCCGGTGACGGCACCACCACTGCGACCGTGCTTGCTCAGTCCCTGGTTCAC GAGGGTCTGAAGAACGTGGTCGCCGGCTCCAACCCGATCGCCCTGCGTCGCGGCATCGAG AAGGCCACCGAGGTCATCGTCAAGGAACTCGTCGCTGCCGCCAAGGACGTCGAGACCAAG GACCAGATCGCTGCTACCGCCACCATCTCCGCCGCCGACCCTGAGGTCGGCGAGAAGATC GCTGAGGCTCTGGACAAGGTCGGCCAGGACGGCGTTGTGACCGTTGAAGACAACAACCGC TTCGGCCTGGACCTCGACTTCACCGAGGGCATGCGTTTCGACAAGGGCTACATCGCCCCG TACTTCGTCACCAACGCTGACGACCAGACCGCAGTGCTCGAAGATCCGTACATTCTGCTG ACCTCCGGCAAGGTCTCCTCCCAGCAGGACATCGTGCACGTGGCCGAGCTGGTCATGAAG ACCGGCAAGCCGCTGCTGATCATCGCTGAGGACGTCGACGGCGAAGCACTGCCGACCCTG ATCCTGAACAACATCCGTGGCACCTTCAAGTCCTGCGCCGTCAAGGCCCCGGGCTTTGGC GACCGTCGCAAGGCCATGCTGCAGGATATGGCCATCCTGACCGGTGCTCAGGTTGTCTCC GACGAACTGGGCCTGAAGCTCGAGTCCGTCGACACCTCCGTGCTCGGCCACGCCAAGAAG GTCATCGTTTCCAAGGACGAGACCACCATCGTTCAGGGCGCTGGCTCCAAGGAAGACATC GACGCTCGCGTGGCCCAGATCCGCGCTGAGATCGAGAACACCGACTCCGATTACGACCGT GAGAAGCTGCAGGAGCGTCTGGCCAAGCTGGCCGGCGGTGTGGCTGTCATCAAGGTCGGC GCTGCCACCGAGGTTGAGGCCAAGGAGCGCAAGCACCGCATCGAAGATGCCGTGCGTAAC GCCAAGGCCGCCATCGAGGAAGGCCTGCTGCCCGGCGGTGGTGTGGCCCTCGTTCAGGCT GCTGCCAAGGCCGAGAAGGCCGAGGCCGTCGCCTCCCTGACCGGCGAAGAGGCTACCGGT GCCGCCATCGTGTTCCGCGCCATCGAAGCCCCGATCAAGCAGATCGCCGAGAACGCCGGC GTGTCCGGTGACGTGGTCATCAACACCGTCCGCTCCCTGCCTGATGGCGAAGGCTTCAAC GCCGCCACCGACACCTACGAAGACCTGCTGGCCGCCGGTGTGACCGACCCGGTCAAGGTG ACCCGCTCCGCTCTGCAGAACGCCGCCTCCATCGCTGGTCTGTTCCTGACCACCGAGGCC GTCGTTGCCAACAAGCCGGAGCCGAAGCCTGCTGCCCCGGCCGCCGGTGCCGACATGGGC TACTGA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIISYDEEARQGMLEGLDKLANTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEID LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE KATEVIVKELVAAAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNR FGLDLDFTEGMRFDKGYIAPYFVTNADDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK TGKPLLIIAEDVDGEALPTLILNNIRGTFKSCAVKAPGFGDRRKAMLQDMAILTGAQVVS DELGLKLESVDTSVLGHAKKVIVSKDETTIVQGAGSKEDIDARVAQIRAEIENTDSDYDR EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA AAKAEKAEAVASLTGEEATGAAIVFRAIEAPIKQIAENAGVSGDVVINTVRSLPDGEGFN AATDTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPKPAAPAAGADMG Y |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACCGTGCTTGCTCAGTCCCTGGTTCACGAGGGTCTGAAGAACGTGGTCGCCGGCTCC AACCCGATCGCCCTGCGTCGCGGCATCGAGAAGGCCACCGAGGTCATCGTCAAGGAACTC GTCGCTGCCGCCAAGGACGTCGAGACCAAGGACCAGATCGCTGCTACCGCCACCATCTCC GCCGCCGACCCTGAGGTCGGCGAGAAGATCGCTGAGGCTCTGGACAAGGTCGGCCAGGAC GGCGTTGTGACCGTTGAAGACAACAACCGCTTCGGCCTGGACCTCGACTTCACCGAGGGC ATGCGTTTCGACAAGGGCTACATCGCCCCGTACTTCGTCACCAACGCTGACGACCAGACC GCAGTGCTCGAAGATCCGTACATTCTGCTGACCTCCGGCAAGGTCTCCTCCCAGCAGGAC ATCGTGCACGTGGCCGAGCTGGTCATGAAGACCGGCAAGCCGCTGCTGATCATCGCTGAG GACGTCGACGGCGAAGCACTGCCGACCCTGATCCTGAACAACATCCGTGGCACCTTCAAG TCCTGCGCCGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKATEVIVKELVAAAKDVETKDQIAATATIS AADPEVGEKIAEALDKVGQDGVVTVEDNNRFGLDLDFTEGMRFDKGYIAPYFVTNADDQT AVLEDPYILLTSGKVSSQQDIVHVAELVMKTGKPLLIIAEDVDGEALPTLILNNIRGTFK SCAV |