RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b16667 |
| Chaperonin Group: | I |
| Deposit Date: | 2010-04-09 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Filifactor |
| Species: | alocis |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor |
| Original ID: | ATCC 35896 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002390 |
| Peptide Genbank Accession: | EFE28052 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Reference genome from the Human Microbiome Project. Type strain synonyms ATCC 35896 = CCUG 47790 = VPI D40B-5. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGGAAATTAAATTCGGGGAAGACGCAAGAAAAGCATTGGAACGCGGAGTAAAT ATTTTGGCGGATACAGTAAAAGTGACGATCGGACCGAAAGGAAGAAATGTTATTTTAGAT AAAAAATTCGGAAGTCCGTTGATTACCAATGATGGGGTTACTATTGCAAAAGAAATCGAA TTGGAAGATGCTTACGAAAACATGGGAGCACAACTGGTAAAAGAAGTAGCGACAAAAACA AATGATATTGCAGGAGACGGAACAACTACAGCGACACTATTGACACAGGCAATCGTTCGC GAAGGATTGAAAAACGTGGCAGCCGGTGCAAACCCAATCTTCATTCGTAAAGGGATTCAA TTAGCAGTAGACAAAGCGGTAGAAACCTTGCAAGCAAACTCTCGTCCAATCGAAAACAAA GAATCCATTGCACAAGTAGCTGCAATTTCCGCAGGAGACGAAGAAGTAGGAAAAATGATT GCAGATGCAATGGAAAAAGTCGGAAAAGACGGTGTTATTACAGTAGAAGAATCAAAAACA ATGGGAACTACTTTGGAAGTAGTAGAAGGAATGCAATTTGACAGAGGATATGTTTCTCCT TACATGTCAACCGATATGGAAAAAATGGAAGCAAACCTTTCCGATCCGTTGATTTTAATC ACAGATAAAAAAATTACAAACATCCAAGAAATCCTTCCTGTATTGGAACAAATTGTACAA CAAGGTAAAAAATTGTTGATTATTGCAGAAGATATTGAAGGAGAAGCATTGGCTACTTTG GTAGTGAACAAATTGAGAGGAACATTTGATGTTGTTGCAATCAAAGCACCTGGATTCGGA GATCGCAGAAAAGCAATGTTACAAGATATTGCTATCTTGACAGGAGGAACCGTAATCTCT GAAGAAGTTGGATTGGAACTGAAAGATGCAGATATGACAATGCTTGGTCGTGCAGGTTCT GTCAAAGTAACGAAGGAAAATACAGTTATTGTAAACGGAGCGGGAAGTGCAAGCGATATA GAAGAAAGAGTAGCTTTGATTCGCAGACAAATCGAAGACACTACTTCTGAGTTTGATAGA GAAAAATTGGAAGAACGACTTGCGAAATTAGCAGGTGGAGTTGCAGTAATCCAAGTTGGA GCAGCAACAGAAACTGAATTGAAAGAAAGAAAACTTCGTATGGAAGATGCATTGAATGCA ACAAGAGCTGCGGTAGAAGAAGGAATCGTATCCGGTGGTGGAGTTGCATTGATTGAAACT ATCTCCGAAGTTGAAAAACTGTTGACAGAAGAAAATACAGAAATCAAAACAGGTATCAAA ATTATTTTAAGCGCATTACAAGAACCGTTGAAACAAATCGCAATCAACGCAGGTTTGGAA GGTGCCGTTATTGTAGAAAATGTTCGTAAAGGCGAAAAAGGAATGGGATTCGACGCGTTC AGAGAAGAATATGTCAATATGATTGAAGCGGGAATTATCGACCCTACAAAAGTAACAAGA AGTGCATTACAAAATGCTTCTTCCGTAGCGGCTACTTTCTTAACAACAGAAGCTGCGGTA GTAGATATTAAATCAGAAGAACCTGCAATGCCTCCAATGGGTGGCGGAATGCCGATGATG TAG |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFGEDARKALERGVNILADTVKVTIGPKGRNVILDKKFGSPLITNDGVTIAKEIE LEDAYENMGAQLVKEVATKTNDIAGDGTTTATLLTQAIVREGLKNVAAGANPIFIRKGIQ LAVDKAVETLQANSRPIENKESIAQVAAISAGDEEVGKMIADAMEKVGKDGVITVEESKT MGTTLEVVEGMQFDRGYVSPYMSTDMEKMEANLSDPLILITDKKITNIQEILPVLEQIVQ QGKKLLIIAEDIEGEALATLVVNKLRGTFDVVAIKAPGFGDRRKAMLQDIAILTGGTVIS EEVGLELKDADMTMLGRAGSVKVTKENTVIVNGAGSASDIEERVALIRRQIEDTTSEFDR EKLEERLAKLAGGVAVIQVGAATETELKERKLRMEDALNATRAAVEEGIVSGGGVALIET ISEVEKLLTEENTEIKTGIKIILSALQEPLKQIAINAGLEGAVIVENVRKGEKGMGFDAF REEYVNMIEAGIIDPTKVTRSALQNASSVAATFLTTEAAVVDIKSEEPAMPPMGGGMPMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACACTATTGACACAGGCAATCGTTCGCGAAGGATTGAAAAACGTGGCAGCCGGTGCA AACCCAATCTTCATTCGTAAAGGGATTCAATTAGCAGTAGACAAAGCGGTAGAAACCTTG CAAGCAAACTCTCGTCCAATCGAAAACAAAGAATCCATTGCACAAGTAGCTGCAATTTCC GCAGGAGACGAAGAAGTAGGAAAAATGATTGCAGATGCAATGGAAAAAGTCGGAAAAGAC GGTGTTATTACAGTAGAAGAATCAAAAACAATGGGAACTACTTTGGAAGTAGTAGAAGGA ATGCAATTTGACAGAGGATATGTTTCTCCTTACATGTCAACCGATATGGAAAAAATGGAA GCAAACCTTTCCGATCCGTTGATTTTAATCACAGATAAAAAAATTACAAACATCCAAGAA ATCCTTCCTGTATTGGAACAAATTGTACAACAAGGTAAAAAATTGTTGATTATTGCAGAA GATATTGAAGGAGAAGCATTGGCTACTTTGGTAGTGAACAAATTGAGAGGAACATTTGAT GTTGTTGCAATC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATLLTQAIVREGLKNVAAGANPIFIRKGIQLAVDKAVETLQANSRPIENKESIAQVAAIS AGDEEVGKMIADAMEKVGKDGVITVEESKTMGTTLEVVEGMQFDRGYVSPYMSTDMEKME ANLSDPLILITDKKITNIQEILPVLEQIVQQGKKLLIIAEDIEGEALATLVVNKLRGTFD VVAI |