RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b10689 |
| Chaperonin Group: | I |
| Deposit Date: | 2007-12-09 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Roseobacter |
| Species: | litoralis |
| Strain: | Och 149 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002623 |
| Peptide Genbank Accession: | AEI94681 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From whole genome shotgun sequence. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCTAAGGACGTCAAATTCGACACCGATGCCCGTAACCGTATGCTCAGGGGTGTA AACATCCTGGCCGACGCGGTTAAAGTTACACTTGGCCCAAAAGGCCGTAACGTCGTTCTG GACAAATCTTTCGGCGCACCGCGCATCACCAAAGATGGTGTATCCGTGGCGAAAGAAATC GAACTGGAAGACAAGTTCGAAAACATGGGCGCACAGATGGTGAAGGAAGTCGCTTCCCGC ACCAACGACGAAGCAGGCGACGGTACAACAACCGCGACTGTTCTGGCTCAGGCGATCGTC AAAGAAGGCCTGAAGTCGGTTGCCGCTGGCATGAACCCGATGGACCTCAAGCGCGGTATT GATCTGGCGACGGTCAAAGTCGTTGCTGCGATCAAGGAAGCCTCGCGTGAAGTCAGCGAC AGCGCAGAAGTTGCACAGGTCGGCACGATCTCGGCCAACGGCGAAGCTGAAATCGGCCAG CAGATCGCTGATGCGATGCAAAAGGTTGGCAACGAAGGTGTTATCACCGTCGAGGAAAAC AAAGGTCTGGAAACAGAGACAGACGTGGTCGAGGGCATGCAGTTCGACCGTGGCTACCTC TCCCCTTACTTTGTCACCAACGCCGACAAAATGACCACTGAACTGGAAGACTGCATCGTG CTGTTGCACGAAAAGAAACTGTCGTCCCTCCAGCCAATGGTTCCCCTGCTCGAGCAGGTC ATCCAGTCGCAAAAACCGCTCCTCATTATTGCTGAGGACGTGGAAGGCGAAGCGCTGGCA ACTCTGGTTGTCAACAAACTGCGCGGCGGTCTGAAAATCGCAGCTGTCAAAGCTCCTGGT TTCGGCGATCGCCGCAAAGCCATGTTGCAGGACATCGCGATCCTCACAGGCGGTCAGGTC ATCTCCGAAGATCTGGGCATGAAGCTTGAGTCCGTCACAATGGACATGCTGGGTTCTGCC AAGAAGATCCAGATCACCAAAGACGAAACAACAATCGTTGATGGCGCTGGCGAGAAGGCC GAAATTCAGGCGCGTGTTTCCCAGATACGTACACAGATCGAAGAAACCACATCTGATTAC GATCGTGAAAAGCTGCAGGAACGTGTTGCCAAACTGGCAGGCGGTGTTGCTGTGATCCGC GTTGGCGGCATGACCGAAGTAGAAGTGAAAGAGCGTAAAGACCGCGTCGATGACGCCCTG AACGCCACACGCGCTGCTGTCCAAGAAGGCATCGTCGTTGGCGGTGGTGTTGCGCTGGTT CAGGCTGGCAAGCACCTTGAGGGTCTGACCGGTGACAACAACGACCAGAACGTTGGCATC AGCATCGTGCGCAAGGCGCTCGAAGCACCTCTGCGTCAGATCGCGGAAAACGCAGGCGTC GACGGTTCCGTCGTTGCAGGCAAAATCCGTGAAAGCGACGATCTGAAGTTCGGCTTCAAC GCCCAGACCGAAGAATATGGTGACATGTTCGCGTTTGGTGTGATTGACCCGGCGAAAGTT GTTCGGACTGCTCTGCAGGACGCGGCATCTATCGCAGGTCTCTTGATCACAACCGAAGCC ATGGTTGCAGATAAGCCCGCAAAAGAGGGTGCAGCACCAGGCGGCGGCATGCCCGACATG GGCGGCATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFDTDARNRMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGLKSVAAGMNPMDLKRGI DLATVKVVAAIKEASREVSDSAEVAQVGTISANGEAEIGQQIADAMQKVGNEGVITVEEN KGLETETDVVEGMQFDRGYLSPYFVTNADKMTTELEDCIVLLHEKKLSSLQPMVPLLEQV IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV ISEDLGMKLESVTMDMLGSAKKIQITKDETTIVDGAGEKAEIQARVSQIRTQIEETTSDY DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALV QAGKHLEGLTGDNNDQNVGISIVRKALEAPLRQIAENAGVDGSVVAGKIRESDDLKFGFN AQTEEYGDMFAFGVIDPAKVVRTALQDAASIAGLLITTEAMVADKPAKEGAAPGGGMPDM GGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACTGTTCTGGCTCAGGCGATCGTCAAAGAAGGCCTGAAGTCGGTTGCCGCTGGCATG AACCCGATGGACCTCAAGCGCGGTATTGATCTGGCGACGGTCAAAGTCGTTGCTGCGATC AAGGAAGCCTCGCGTGAAGTCAGCGACAGCGCAGAAGTTGCACAGGTCGGCACGATCTCG GCCAACGGCGAAGCTGAAATCGGCCAGCAGATCGCTGATGCGATGCAAAAGGTTGGCAAC GAAGGTGTTATCACCGTCGAGGAAAACAAAGGTCTGGAAACAGAGACAGACGTGGTCGAG GGCATGCAGTTCGACCGTGGCTACCTCTCCCCTTACTTTGTCACCAACGCCGACAAAATG ACCACTGAACTGGAAGACTGCATCGTGCTGTTGCACGAAAAGAAACTGTCGTCCCTCCAG CCAATGGTTCCCCTGCTCGAGCAGGTCATCCAGTCGCAAAAACCGCTCCTCATTATTGCT GAGGACGTGGAAGGCGAAGCGCTGGCAACTCTGGTTGTCAACAAACTGCGCGGCGGTCTG AAAATCGCAGCTGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVKEGLKSVAAGMNPMDLKRGIDLATVKVVAAIKEASREVSDSAEVAQVGTIS ANGEAEIGQQIADAMQKVGNEGVITVEENKGLETETDVVEGMQFDRGYLSPYFVTNADKM TTELEDCIVLLHEKKLSSLQPMVPLLEQVIQSQKPLLIIAEDVEGEALATLVVNKLRGGL KIAAV |