RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b1317 |
| Chaperonin Group: | I |
| Deposit Date: | 2001-11-16 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Treponema |
| Species: | pallidum |
| Strain: | subsp. pallidum str. Nichols |
| Lineage: | root; cellular organisms; Bacteria; Spirochaetes; Spirochaetes (class); Spirochaetales; Spirochaetaceae; Treponema |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_000919 |
| Peptide Genbank Accession: | NP_218470 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Complete genome RefSeq. LBSN database states there is no type strain of T. pallidum. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCGAAGCAATTGCTGTTTAATGAGGAAGCCCGCAAGAAGCTGCTTTCCGGGGTTGAG CAGATTTCGAGTGCGGTGAAGGTAACGCTTGGTCCTAAGGGTCGCAATGTCTTGCTTGAA AAAGGGTACGGGGCTCCCACAGTCACGAAGGATGGGGTTTCCGTTGCGAAAGAGGTTGAG CTCGAAGATCCGTTCGAGAATATGGGTGCACAGCTTTTAAAAGAGGTGGCTACGAAGACG AACGACGTAGCTGGGGATGGCACAACTACTGCGACGGTATTGGCGTATTCGATGGTGCGT GAGGGTCTGAAGGCGGTTGCTGCCGGTATGACGCCCCTTGAGTTGAAGCGTGGTATGGAT AAGGCAGTTGCGATTGCAGTCGATGACATTAAGCAAAATTCCAAGGGTATAAAGAGCAAT GAAGAAGTCGCTCATGTAGCGTCAGTATCTGCGAATAACGACAAAGAGATTGGAAGGATT CTGGCAAGCGCAATCGAGAAGGTGGGGAATGACGGGGTCATTGACGTTGACGAAGCCCAG ACAATGGAAACGGTGACGGAATTCGTTGAAGGGATGCAGTTTGATCGTGGGTACATCTCG TCCTACTTCGTCACTGACCGAGATAGGATGGAAACGGTGTATGAAAATCCTTACATCCTT ATCTACGATAAGTCCATCTCGACTATGAAGGATTTGCTTCCGCTACTCGAGAAAATTGCG CAAACAGGTCGCCCGCTGCTCATCATAGCTGAGGATGTCGAAGGCGAAGCACTGGCTACG CTGGTGGTGAATAGTCTTCGGGGAACGCTGAAGACGTGTGCGGTGAAGGCTCCCGGTTTC GGCGATAGGCGTAAAGAAATGCTTGAGGATATCGCGATTCTTTCGGGCGGTCAGGTCATT TCCGAGGATTTAGGATTGAAGCTAGAGTCCGCGGATATTGCGCTCTTAGGTCAGGCAAAG AGCGTGAAGGTAGACAAGGAGAATACCACGATTATTGACGGGTCGGGTAAGTCGAAGGAT ATCAAGGATCGTATAGAGCAGATTAAAAAGCAAATAGAGGCCTCGACTTCAGATTATGAC AGTGAGAAGTTGAAGGAGCGCTTGGCAAAGCTCTCTGGTGGCGTTGCAGTTATCAAAATT GGTGCAGTCACCGAAGTGGAAATGAAAGAGAAGAAGCACCGGGTTGAAGATGCCTTAAAT GCGACACGTGCGGCAATAGAGGAAGGTATTGTTGCTGGTGGTGGTTTAGCGCTTATTCAG GCTGCGGCGGCGCTCGAGAAAGCTGATTTGAGTGGACTGACTCCAGATGAGGCGGTTGGT TTTAAGATTGTGCGTCGTGCTCTCGAGGAGCCGATACGCCAGATTTCAGAGAACGCGGGT ATTGATGGCGCAGTTGTGGCAGAGAAGGCAAAGGAGAAACGTGGCATCGGTTTTGATGCA TCCAAGATGGAATGGGTTGATATGATTAAGGTCGGGATTATCGATCCGGCGAAGGTTACA CGTTCAGCACTACAGAACGCGGCTTCGGTTTCTGGGCTTTTGTTGACTACCGAATGTGCA ATTGCTGCAATTCCCGAAAAGAGTTCCTCTACACCGCCAGCTCCTGACATGGGAGGTATG GGAGGTATGTATTGA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKQLLFNEEARKKLLSGVEQISSAVKVTLGPKGRNVLLEKGYGAPTVTKDGVSVAKEVE LEDPFENMGAQLLKEVATKTNDVAGDGTTTATVLAYSMVREGLKAVAAGMTPLELKRGMD KAVAIAVDDIKQNSKGIKSNEEVAHVASVSANNDKEIGRILASAIEKVGNDGVIDVDEAQ TMETVTEFVEGMQFDRGYISSYFVTDRDRMETVYENPYILIYDKSISTMKDLLPLLEKIA QTGRPLLIIAEDVEGEALATLVVNSLRGTLKTCAVKAPGFGDRRKEMLEDIAILSGGQVI SEDLGLKLESADIALLGQAKSVKVDKENTTIIDGSGKSKDIKDRIEQIKKQIEASTSDYD SEKLKERLAKLSGGVAVIKIGAVTEVEMKEKKHRVEDALNATRAAIEEGIVAGGGLALIQ AAAALEKADLSGLTPDEAVGFKIVRRALEEPIRQISENAGIDGAVVAEKAKEKRGIGFDA SKMEWVDMIKVGIIDPAKVTRSALQNAASVSGLLLTTECAIAAIPEKSSSTPPAPDMGGM GGMY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACGGTATTGGCGTATTCGATGGTGCGTGAGGGTCTGAAGGCGGTTGCTGCCGGTATG ACGCCCCTTGAGTTGAAGCGTGGTATGGATAAGGCAGTTGCGATTGCAGTCGATGACATT AAGCAAAATTCCAAGGGTATAAAGAGCAATGAAGAAGTCGCTCATGTAGCGTCAGTATCT GCGAATAACGACAAAGAGATTGGAAGGATTCTGGCAAGCGCAATCGAGAAGGTGGGGAAT GACGGGGTCATTGACGTTGACGAAGCCCAGACAATGGAAACGGTGACGGAATTCGTTGAA GGGATGCAGTTTGATCGTGGGTACATCTCGTCCTACTTCGTCACTGACCGAGATAGGATG GAAACGGTGTATGAAAATCCTTACATCCTTATCTACGATAAGTCCATCTCGACTATGAAG GATTTGCTTCCGCTACTCGAGAAAATTGCGCAAACAGGTCGCCCGCTGCTCATCATAGCT GAGGATGTCGAAGGCGAAGCACTGGCTACGCTGGTGGTGAATAGTCTTCGGGGAACGCTG AAGACGTGTGCGGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAYSMVREGLKAVAAGMTPLELKRGMDKAVAIAVDDIKQNSKGIKSNEEVAHVASVS ANNDKEIGRILASAIEKVGNDGVIDVDEAQTMETVTEFVEGMQFDRGYISSYFVTDRDRM ETVYENPYILIYDKSISTMKDLLPLLEKIAQTGRPLLIIAEDVEGEALATLVVNSLRGTL KTCAV |