RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b7415 |
| Chaperonin Group: | I |
| Deposit Date: | 2005-01-10 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Campylobacter |
| Species: | jejuni |
| Strain: | RM1221 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter |
| Original ID: | ATCC BAA-1062 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_003912 |
| Peptide Genbank Accession: | YP_179343 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From complete genome sequence. From the NCBI Genome Project page: "This strain (RM1221; ATCC BAA-1062) was isolated from the skin of a retail chicken by the Food Safety Research Information Office and minimally passaged. This strain has unique features that distinguish it from Campylobacter jejuni strain NCTC 11168 including unique lipooligosaccharide, capsule, and other loci, as well as the ability to colonize chicken skin and other differences." |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGAAATTATTTTTTCAGATGAAGCAAGAAATAAACTTTACGAGGGCGTTAAA AAACTTAATGACGCAGTAAAAGTAACTATGGGGCCAAGAGGACGCAATGTTTTAATCCAA AAAAGCTTTGGTGCTCCAAGCATTACTAAAGATGGCGTAAGTGTTGCTAAAGAAGTAGAG CTTAAAGATAGTCTTGAAAATATGGGTGCTTCACTCGTAAGAGAAGTAGCGAGTAAAACA GCTGATCAAGCAGGCGATGGAACAACTACTGCAACGGTTTTAGCTCATGCAATTTTCAAA GAAGGTTTAAGAAATATCACAGCAGGTGCAAATCCTATCGAGGTAAAACGCGGTATGGAT AAAGCTTGCGAAGCTATAGTAGCAGAACTTAAAAAACTTTCTCGCGAAGTAAAAGATAAA AAAGAAATTGCACAAGTTGCTACAATCTCAGCCAACTCTGATGAAAAAATCGGAAATTTA ATCGCTGATGCCATGGAAAAAGTGGGCAAAGATGGTGTTATCACTGTTGAAGAGGCAAAA TCAATCAATGATGAATTAAATGTAGTTGAAGGTATGCAATTTGACAGAGGTTATTTAAGC CCTTATTTTATCACTAATGCAGAAAAAATGACAGTAGAGCTTTCAAGCCCTTATATCCTG CTTTTTGATAAAAAAATTGCAAATTTAAAAGATTTATTACCGGTTTTAGAACAAATTCAA AAAACAGGCAAACCACTTTTAATTATCGCTGAAGATATTGAAGGCGAAGCGCTTGCAACT TTGGTTGTAAATAAACTTCGCGGTGTTCTTAATATTTCAGCAGTAAAAGCTCCAGGTTTT GGCGATAGAAGAAAAGCTATGCTTGAAGATATAGCGATTTTAACAGGTGGAGAAGTGATT TCTGAAGAACTTGGAAGAACTCTTGAAAGTGCGACTATACAAGATCTTGGACAAGCTTCT AGTGTAATCATCGATAAAGACAATACAACCATAGTAAATGGTGCAGGCGAAAAAGCAAAT ATCGATGCAAGAGTCAATCAAATCAAAGCACAAATTGCTGAAACAACTTCAGATTATGAC AGAGAAAAATTACAAGAAAGACTTGCAAAATTAAGTGGTGGTGTTGCAGTTATTAAAGTA GGTGCAGCAACTGAAACTGAAATGAAAGAGAAAAAAGATCGTGTTGATGATGCTTTAAGC GCTACTAAAGCAGCAGTTGAAGAAGGTATAGTAATCGGTGGTGGTGCAGCGCTTATCAAA GCAAAAGCTAAAATCAAACTTGATCTACAGGGTGATGAAGCAATTGGCGCAGCTATCGTT GAAAGAGCTTTAAGAGCACCTTTAAGACAAATTGCTGAAAATGCAGGATTTGATGCAGGT GTGGTTGTAAATAGCGTAGAAAATGCTAAAGATGAAAACACAGGATTTGATGCTGCAAAA GGTGAATATGTTAATATGCTTGAAAGTGGAATTATCGATCCTGTTAAAGTAGAAAGAGTA GCTTTACTCAATGCAGTTTCTGTAGCTAGTATGCTTTTAACCACAGAAGCAACAATTAGT GAAATTAAAGAAGATAAGCCTACTATGCCAGATATGAGCGGTATGGGAGGAATGGGTGGC ATGGGCGGAATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFGAPSITKDGVSVAKEVE LKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEGLRNITAGANPIEVKRGMD KACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNLIADAMEKVGKDGVITVEEAK SINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPYILLFDKKIANLKDLLPVLEQIQ KTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVI SEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYD REKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIK AKAKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAK GEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDKPTMPDMSGMGGMGG MGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACGGTTTTAGCTCATGCAATTTTCAAAGAAGGTTTAAGAAATATCACAGCAGGTGCA AATCCTATCGAGGTAAAACGCGGTATGGATAAAGCTTGCGAAGCTATAGTAGCAGAACTT AAAAAACTTTCTCGCGAAGTAAAAGATAAAAAAGAAATTGCACAAGTTGCTACAATCTCA GCCAACTCTGATGAAAAAATCGGAAATTTAATCGCTGATGCCATGGAAAAAGTGGGCAAA GATGGTGTTATCACTGTTGAAGAGGCAAAATCAATCAATGATGAATTAAATGTAGTTGAA GGTATGCAATTTGACAGAGGTTATTTAAGCCCTTATTTTATCACTAATGCAGAAAAAATG ACAGTAGAGCTTTCAAGCCCTTATATCCTGCTTTTTGATAAAAAAATTGCAAATTTAAAA GATTTATTACCGGTTTTAGAACAAATTCAAAAAACAGGCAAACCACTTTTAATTATCGCT GAAGATATTGAAGGCGAAGCGCTTGCAACTTTGGTTGTAAATAAACTTCGCGGTGTTCTT AATATTTCAGCAGTA |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAHAIFKEGLRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATIS ANSDEKIGNLIADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKM TVELSSPYILLFDKKIANLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVL NISAV |