RECORD DETAILS
For pacc NC_005072, see also: b4997
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b4996 |
| Chaperonin Group: | I |
| Deposit Date: | 2004-01-19 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Prochlorococcus |
| Species: | marinus |
| Strain: | subsp. pastoris strain CCMP1986 |
| Lineage: | root; cellular organisms; Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_005072 |
| Peptide Genbank Accession: | NP_893553 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From complete genome sequence. Synonym:Prochlorococcus marinus MED4, strain coidentity: CCMP1378 = MED4. One of 2 cpn60 genes. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAAAGAATTATTTACAACGAGCAAGCTCGTAGAGCGCTTGAAAGAGGCATTGAT ATCCTTGCTGAGTCTGTAGCTGTAACGCTTGGACCAAAAGGAAGAAATGTTGTCTTAGAG AAAAAATTTGGGGCCCCTCAAATCATTAATGATGGGGTAACAATCGCAAAAGAAATTGAA TTAGAGGACCATATTGAAAATACTGGTGTTGCTCTAATCAGACAAGCTGCTTCAAAGACA AATGATGCTGCAGGTGATGGTACCACCACCGCGACTGTTTTAGCTCATGCAATGGTAAAA GCTGGCTTAAGAAACGTAGCAGCTGGTGCTAACGCAATTACGCTTAAAAAAGGTATTGAT AAAGCTACAGAATTCTTGGTTGGCAAAATTGAAGAGAATTCAAAGCCGATTAGTGATAGC ACTGCTATAGCTCAATGTGGAACTATAGCGGCAGGTAATGATGAGGAAGTTGGCGAAATG ATTGCCAACGCAATGGATAAAGTTGGCAAAGAGGGTGTTATTTCTCTCGAAGAGGGAAAA TCAATGACCACTGAGTTGGAAGTTACTGAAGGAATGAGATTTGATAAAGGTTACATTTCT CCATATTTTGCGACAGATACTGAGCGTATGGAGGCAGTTTTAGATGAGCCTTACATTTTA CTCACTGATAAAAAAATCGCTTTAGTACAAGATTTAGTACCAGTTCTAGAGCAAATAGCT AAAACAGGAAAGCCACTAGTGATCATCGCAGAAGATATTGAAAAAGAAGCTTTAGCAACT TTAGTAGTAAATAGATTAAGAGGTGTACTTAATGTTGCTGCAGTTAAGGCTCCAGGATTT GGGGATAGAAGAAAAGCAATGCTTGAAGATATGGCTGTTTTAACCAATGGTCAACTAATT ACTGAAGATGCAGGCTTAAAATTAGAAAACGCAACTTTAGAGATGTTAGGCACCGGTAGA AGAATCACTATCAACAAAGAGACAACAACTATTGTCGCTGAGGGTAATGAAAAGGCTGTT ACTGCAAGATGCGATCAGATTAAAAAGCAAATGGATGAAACGGACTCTTCCTACGATAAA GAAAAACTTCAGGAACGTTTAGCTAAGCTGGCTGGAGGTGTTGCAGTTATCAAAGTCGGT GCAGCTACTGAAACTGAAATGAAGGATAAAAAACTTCGTTTAGAAGATGCTATTAATGCA ACAAAAGCTGCTGTTGAAGAGGGAATTGTTCCCGGAGGTGGTACGACTTTAGCTCACTTG GCTCCGATTCTTAAGGAATGGGCTGATAAAGCTTTATCTGGAGAGGAATTAATAGGAGCT AACATTGTTGAGGCCTCATTAACATCTCCGCTCATGAGAATTGCCGAAAATGCCGGTTCA AATGGAGCAGTAATTGCTGAAAATGTTAAATCAAAACCATTCAATGATGGATTTAATGCA GCTACTGGAGATTATGTAGATATGTCTGCAGCTGGAATAGTTGATCCTGCAAAAGTTACT CGTTCAGGATTACAGAATGCAGCATCTATAGCAGGAATGGTACTTACCACTGAATGCATA GTCGCTGATTTGCCAGAGAAAAAAGATGCAGCACCTGCTGGAGCTCCAGGAATGGGGGGA GACTTCGACTATTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIE LEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGID KATEFLVGKIEENSKPISDSTAIAQCGTIAAGNDEEVGEMIANAMDKVGKEGVISLEEGK SMTTELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIALVQDLVPVLEQIA KTGKPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLI TEDAGLKLENATLEMLGTGRRITINKETTTIVAEGNEKAVTARCDQIKKQMDETDSSYDK EKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHL APILKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFNDGFNA ATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGAPGMGG DFDY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACTGTTTTAGCTCATGCAATGGTAAAAGCTGGCTTAAGAAACGTAGCAGCTGGTGCT AACGCAATTACGCTTAAAAAAGGTATTGATAAAGCTACAGAATTCTTGGTTGGCAAAATT GAAGAGAATTCAAAGCCGATTAGTGATAGCACTGCTATAGCTCAATGTGGAACTATAGCG GCAGGTAATGATGAGGAAGTTGGCGAAATGATTGCCAACGCAATGGATAAAGTTGGCAAA GAGGGTGTTATTTCTCTCGAAGAGGGAAAATCAATGACCACTGAGTTGGAAGTTACTGAA GGAATGAGATTTGATAAAGGTTACATTTCTCCATATTTTGCGACAGATACTGAGCGTATG GAGGCAGTTTTAGATGAGCCTTACATTTTACTCACTGATAAAAAAATCGCTTTAGTACAA GATTTAGTACCAGTTCTAGAGCAAATAGCTAAAACAGGAAAGCCACTAGTGATCATCGCA GAAGATATTGAAAAAGAAGCTTTAGCAACTTTAGTAGTAAATAGATTAAGAGGTGTACTT AATGTTGCTGCAGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAHAMVKAGLRNVAAGANAITLKKGIDKATEFLVGKIEENSKPISDSTAIAQCGTIA AGNDEEVGEMIANAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDKGYISPYFATDTERM EAVLDEPYILLTDKKIALVQDLVPVLEQIAKTGKPLVIIAEDIEKEALATLVVNRLRGVL NVAAV |