RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b5081 |
| Chaperonin Group: | I |
| Deposit Date: | 2004-04-20 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Pseudomonas |
| Species: | fluorescens |
| Strain: | Pf0-1 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_007492 |
| Peptide Genbank Accession: | YP_350229 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From whole genome shotgun sequence. Assembly updated 2005-10-17. This strain is also described as "PfO-1" in some places. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCTAAAGAAGTTAAATTCGGCGATTCCGCCCGCAAGAAAATGCTGGTTGGCGTA AACGTCCTGGCTGACGCGGTAAAAGCGACCCTGGGCCCGAAAGGCCGTAACGTGATCCTC GAGAAGAGCTTCGGCGCTCCGACCATCACCAAGGACGGCGTTTCCGTTGCCAAGGAAATC GAGCTGGAAGACCGTTTCGAAAACATGGGCGCGCAGCTGGTCAAAGACGTTGCCTCCCGT GCCAACGATGACGCTGGTGACGGTACTACCACCGCTACCGTTCTGGCTCAGTCGATCGTC AACGAAGGCCTGAAAGCCGTCGCTGCCGGCATGAACCCGATGGACCTGAAGCGCGGTATC GACAAAGCGACCATCGCTGTCGTTGCCGAGCTGAAAAAACTGTCCGCACCATGCACCGAC ACTAAAGCGATCGCTCAGGTTGGCACCATCTCCGCCAACTCCGACAACTCCATCGGCGAC ATCATTGCCGAAGCCATGGAAAAAGTCGGTAAAGAAGGCGTGATCACCGTTGAAGAAGGC TCTGGCCTGGAAAACGAACTGTCGGTTGTAGAAGGCATGCAGTTCGACCGTGGCTACCTG TCCCCATACTTCGTCAACAAGCCGGACACCATGGTCGCCGAGCTGGAAGGCGCGCTGATC CTGCTGGTCGACAAGAAGATCTCGAACATCCGCGAAATGCTGCCAGTACTGGAAGCCGTT GCCAAAGCCGGCCGTCCACTGCTGATCGTTGCCGAAGACGTTGAAGGCGAAGCCCTGGCG ACTCTGGTAGTGAACAACATGCGTGGCATCGTTAAAGTCGCAGCCGTCAAGGCTCCAGGC TTCGGCGACCGTCGCAAGGCCATGCTGCAGGACATCGCCGTTCTGACCGGTGGTACCGTT ATCTCCGAAGAGATCGGCCTGAGCCTGGAAAGCACCACCCTGGAACACCTGGGTAGCGCC AAGCGCGTGACCCTGTCCAAGGAAAACACCATCATCGTTGACGGTGCTGGCAATGACGGC GACATCCAGGCGCGTATCGCTCAGATCCGTGCCCAGGTTGCCGAGACTTCCTCGGACTAC GACCGTGAAAAACTGCAAGAGCGTCTGGCCAAGCTGTCCGGCGGCGTTGCAGTGATCAAG GTTGGCGCCGGTTCCGAAGTTGAAATGAAAGAGAAGAAAGCCCGCGTTGAAGACGCCCTA CACGCAACCCGCGCAGCCGTTGAAGAAGGCGTGGTACCTGGCGGTGGCGTTGCGCTGATC CGCGCTCTGAACGCGATCATCAACCTCAAAGGCGACAACGCCGACCAGGACGTAGGTATC GCTGTTCTGCGTCGTGCCGTTGAAGCACCGCTGCGTCAGATCGCTGCCAACAGCGGTGAC GAGCCAAGCGTTGTGGTCAACGAAGTCAAGAACGGCAAAGGTAACTTCGGTTACAACGCT GCGACTGGCGAATACGGCGACATGATCGAAATGGGCATCCTGGACCCAACCAAGGTAACC CGTTCCGCTCTGCAAGCTGCATCGTCGATCGGCGGTCTGATCCTGACCACCGAAGCTGCT GTTGCTGACGCACCGAAGAAAGACGGTGCTGCTGGCGGCGGTATGCCAGACATGGGCGGC ATGGGTGGCATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVILEKSFGAPTITKDGVSVAKEI ELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI DKATIAVVAELKKLSAPCTDTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEG SGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGALILLVDKKISNIREMLPVLEAV AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV ISEEIGLSLESTTLEHLGSAKRVTLSKENTIIVDGAGNDGDIQARIAQIRAQVAETSSDY DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI RALNAIINLKGDNADQDVGIAVLRRAVEAPLRQIAANSGDEPSVVVNEVKNGKGNFGYNA ATGEYGDMIEMGILDPTKVTRSALQAASSIGGLILTTEAAVADAPKKDGAAGGGMPDMGG MGGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTTCTGGCTCAGTCGATCGTCAACGAAGGCCTGAAAGCCGTCGCTGCCGGCATG AACCCGATGGACCTGAAGCGCGGTATCGACAAAGCGACCATCGCTGTCGTTGCCGAGCTG AAAAAACTGTCCGCACCATGCACCGACACTAAAGCGATCGCTCAGGTTGGCACCATCTCC GCCAACTCCGACAACTCCATCGGCGACATCATTGCCGAAGCCATGGAAAAAGTCGGTAAA GAAGGCGTGATCACCGTTGAAGAAGGCTCTGGCCTGGAAAACGAACTGTCGGTTGTAGAA GGCATGCAGTTCGACCGTGGCTACCTGTCCCCATACTTCGTCAACAAGCCGGACACCATG GTCGCCGAGCTGGAAGGCGCGCTGATCCTGCTGGTCGACAAGAAGATCTCGAACATCCGC GAAATGCTGCCAGTACTGGAAGCCGTTGCCAAAGCCGGCCGTCCACTGCTGATCGTTGCC GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACAACATGCGTGGCATCGTT AAAGTCGCAGCCGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKATIAVVAELKKLSAPCTDTKAIAQVGTIS ANSDNSIGDIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTM VAELEGALILLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIV KVAAV |