RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b10066 |
| Chaperonin Group: | I |
| Deposit Date: | 2007-03-12 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Shewanella |
| Species: | loihica |
| Strain: | PV-4 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_009092 |
| Peptide Genbank Accession: | YP_001092603 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms strain PV-4 = ATCC BAA-1088 = DSM 17748. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGAAGTTTTATTTGGCAATGACGCTCGCGTAAAAATGCTTGCGGGCGTA AACGTACTGGCTAACGCAGTTAAAGTTACTCTAGGCCCTAAAGGCCGTAACGTAGTTCTA GACAAGAGCTTCGGCGCGCCGCTGATCACCAAAGACGGTGTATCGGTAGCTAAAGAGATC GAACTGGAAGATAAGTTCGAAAACATGGGCGCGCAGATGGTGAAAGAAGTTGCTTCTAAA GCCAACGACGCCGCCGGTGACGGTACCACTACTGCAACCGTACTGGCACAAGCCATCGTA ACCGAAGGCCTGAAAGCCGTTGCCGCTGGCATGAACCCAATGGATCTTAAGCGCGGTATC GACAAGGCGGTTGTAGCTGCCGTTGCCGAGCTGAAAACCCTGTCTCAAGAGTGTAGCGAC ACTAAGGCTATCGCTCAGGTAGGTACCATCTCTGCTAACTCTGACGAGTCAATCGGCGAA ATCATCGCAACTGCGATGGAAAAAGTTGGTAAAGAAGGCGTGATCACAGTTGAAGAAGGT CAGGCCCTAGAGAACGAGCTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGTTACCTG TCTCCATACTTCATCAACAAGCCAGAAACCGGCAGCGTTGAACTTGAAAACCCATACATC CTATTGGTTGACAAGAAGATCTCTAACATCCGTGAGCTACTGCCTATCCTTGAAGGTCTG GCGAAAACCGGTAAGCCACTGATGATCATCGCAGAAGACGTTGAAGGCGAAGCCCTGGCG ACTCTGGTTGTGAACAACATGCGCGGCATCGTTAAAGTGGCTGCGGTTAAGGCACCTGGT TTCGGTGACCGTCGTAAGGCGATGCTACAAGATATCGCTATCCTGACTGGCGGTACTGTG ATTGCCGAAGAGATCGGTCTTGAGCTTGAAAAAGCGACTCTGGAAGACCTAGGTACTGCT AAGCGCGTGGTTATCACCAAAGATGACACTACCATCATCGACGGTACCGGCGAGCAAGAG CAGATCTCTGCCCGTGTTGCCCAGATCAAGATCCAGGCAGAAGAGTCTACTTCAGACTAC GACCGTGAAAAACTACAAGAGCGTATGGCTAAGCTGGCCGGCGGTGTTGCAGTGATCAAA GTCGGTGCCGCTACCGAAGTTGAAATGAAAGAGAAGAAGGCTCGCGTAGAAGACGCGCTG CACGCGACTCGCGCCGCCGTTGAAGAAGGTGTGGTTGCCGGTGGTGGTGTTGCCCTGATC CGCGTTGCTTCTAAGATTGGTGAGCTGGACGTGGCTAACGAAGACCAGAAGCACGGTGTG ACTATCGCACTGCGCGCCATGGAAGCGCCTCTACGTCAAATCGCGACCAACGCAGGTGAA GAAGCCTCAGTTGTAGCGAACAATGTTAAGAACGGCTCTGGTAACTATGGTTACAACGCC GGTAGCGATGTGTATGGTGACATGCTAGAGATGGGTATTCTTGACCCAACTAAGGTGACT CGTAGCGCGCTACAGTTCGCTTCATCTATCGCAGGTCTGATGATCACTACCGAAGCTATG GTGGGTGATGTACCGCAAGAAGCTGGTGCTGGCGATATGGGCGGCATGGGCGGCGGTATG GGTGGTATGGGCGGCATGGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI DKAVVAAVAELKTLSQECSDTKAIAQVGTISANSDESIGEIIATAMEKVGKEGVITVEEG QALENELDVVEGMQFDRGYLSPYFINKPETGSVELENPYILLVDKKISNIRELLPILEGL AKTGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV IAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEQEQISARVAQIKIQAEESTSDY DREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RVASKIGELDVANEDQKHGVTIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA GSDVYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGDVPQEAGAGDMGGMGGGM GGMGGMGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTACTGGCACAAGCCATCGTAACCGAAGGCCTGAAAGCCGTTGCCGCTGGCATG AACCCAATGGATCTTAAGCGCGGTATCGACAAGGCGGTTGTAGCTGCCGTTGCCGAGCTG AAAACCCTGTCTCAAGAGTGTAGCGACACTAAGGCTATCGCTCAGGTAGGTACCATCTCT GCTAACTCTGACGAGTCAATCGGCGAAATCATCGCAACTGCGATGGAAAAAGTTGGTAAA GAAGGCGTGATCACAGTTGAAGAAGGTCAGGCCCTAGAGAACGAGCTGGACGTGGTTGAA GGTATGCAGTTCGACCGTGGTTACCTGTCTCCATACTTCATCAACAAGCCAGAAACCGGC AGCGTTGAACTTGAAAACCCATACATCCTATTGGTTGACAAGAAGATCTCTAACATCCGT GAGCTACTGCCTATCCTTGAAGGTCTGGCGAAAACCGGTAAGCCACTGATGATCATCGCA GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTTGTGAACAACATGCGCGGCATCGTT AAAGTGGCTGCGGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVTEGLKAVAAGMNPMDLKRGIDKAVVAAVAELKTLSQECSDTKAIAQVGTIS ANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETG SVELENPYILLVDKKISNIRELLPILEGLAKTGKPLMIIAEDVEGEALATLVVNNMRGIV KVAAV |