RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b12108 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-06-22 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Pseudomonas |
| Species: | stutzeri |
| Strain: | A1501 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_009434 |
| Peptide Genbank Accession: | YP_001173625 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | This strain (A1501; CGMCC 0351) was isolated from rice roots that had been inoculated with strain A15 in a rice paddy in China. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCTAAAGAAGTCAAATTCGGCGACTCCGCACGCAAGAAGATGCTGGTCGGTGTG AACGTCCTGGCTGATGCGGTAAAAGCGACCCTCGGCCCGAAAGGCCGCAACGTGGTGCTG GAGAAGAGCTTCGGTGCTCCGACCATCACCAAGGACGGCGTTTCCGTTGCCAAGGAAATC GAGCTGAAGGACCGCTTCGAGAACATGGGCGCCCAGCTGGTCAAGGACGTTGCCTCCAAG GCCAACGACGAGGCCGGTGACGGCACCACCACCGCCACCGTCCTGGCCCAGGCCATCGTC AACGAAGGCCTGAAGGCTGTCGCTGCCGGCATGAACCCGATGGACCTGAAGCGCGGCATC GACAAGGCGACCATCGCCATCGTCGCCGAGCTGAAGCAGCTGGCCAAGCCGTGCACCGAC TCCAAGGCCATCGCCCAGGTCGGCACCATCTCCGCCAACTCCGACGAGTCCATCGGCCAG ATCATCGCCGAGGCCATGGAGCGCGTGGGCAAGGAAGGCGTGATCACCGTTGAGGAAGGT TCGGGCTTCGAGAACGAGCTGTCCGTTGTCGAGGGCATGCAGTTCGACCGCGGCTACCTG TCGCCGTACTTCATCAACAAGCCGGACACCATGGTTGCCGAGCTGGACAACCCGCTGCTG CTGCTGGTCGACAAGAAGATCTCCAACATCCGCGAACTGCTGCCGGTGCTGGAAGGCGTC GCCAAAGCCGGTCGTCCGCTGCTGATCGTTGCCGAAGACGTGGAAGGCGAAGCCCTGGCC ACCCTGGTGGTCAACAACATGCGCGGCATCGTCAAGGTCGCTGCGGTCAAGGCACCGGGC TTCGGCGATCGCCGCAAGGCCATGCTGCAGGACATCGCCATCCTGACCGGCGGTACCGTG ATTTCCGAAGAAGTCGGCCTGAGCCTGGAAACCGCTACCCTGGAGCACCTGGGTAACGCC AAGCGCGTCGTGCTGAACAAGGAAAACACCACCATCATCGACGGCGCTGGTGCCCAGGCC GACATCGAAGCTCGTGTGGCGCAGATCCGCAAGCAGATCGAAGACACCACCTCCGACTAC GACAAGGAAAAGCTGCAAGAGCGTCTGGCCAAGCTGGCTGGCGGTGTTGCCGTGATCAAG GTCGGTGCCGGTACCGAAGTCGAGATGAAAGAGAAGAAAGCCCGCGTCGAAGACGCCCTG CATGCGACCCGTGCGGCCGTTGAAGAAGGCGTGGTGCCTGGCGGTGGCGTGGCTCTGGTA CGTGCTCTGCAGGCCATCTCCGAGCTCAAGGGTGACAACGAAGACCAGAACGTCGGTATC GCGCTGCTGCGTCGTGCCGTCGAAGCTCCGCTGCGTCAGATCGTTGCCAACGCCGGCGGC GAGCCGAGCGTGGTGGTCGACAAGGTCAAGCAGGGTTCGGGCAACTACGGCTTCAACGCT GCGTCCGACACCTACGGCGACATGATCGAGATGGGTATCCTCGATCCGGCCAAGGTCACT CGTTCCGCGCTGCAGGCTGCTGCTTCCATCGGCGGTCTGATGGTGACTACCGAAGCCATG GTTGCCGAAGTGGTAGAAGACAAGCCGGCCCCGGCCATGCCGGACATGGGCGGCATGGGT GGCATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI ELKDRFENMGAQLVKDVASKANDEAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI DKATIAIVAELKQLAKPCTDSKAIAQVGTISANSDESIGQIIAEAMERVGKEGVITVEEG SGFENELSVVEGMQFDRGYLSPYFINKPDTMVAELDNPLLLLVDKKISNIRELLPVLEGV AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV ISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGAQADIEARVAQIRKQIEDTTSDY DKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV RALQAISELKGDNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDKVKQGSGNYGFNA ASDTYGDMIEMGILDPAKVTRSALQAAASIGGLMVTTEAMVAEVVEDKPAPAMPDMGGMG GMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTCCTGGCCCAGGCCATCGTCAACGAAGGCCTGAAGGCTGTCGCTGCCGGCATG AACCCGATGGACCTGAAGCGCGGCATCGACAAGGCGACCATCGCCATCGTCGCCGAGCTG AAGCAGCTGGCCAAGCCGTGCACCGACTCCAAGGCCATCGCCCAGGTCGGCACCATCTCC GCCAACTCCGACGAGTCCATCGGCCAGATCATCGCCGAGGCCATGGAGCGCGTGGGCAAG GAAGGCGTGATCACCGTTGAGGAAGGTTCGGGCTTCGAGAACGAGCTGTCCGTTGTCGAG GGCATGCAGTTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAAGCCGGACACCATG GTTGCCGAGCTGGACAACCCGCTGCTGCTGCTGGTCGACAAGAAGATCTCCAACATCCGC GAACTGCTGCCGGTGCTGGAAGGCGTCGCCAAAGCCGGTCGTCCGCTGCTGATCGTTGCC GAAGACGTGGAAGGCGAAGCCCTGGCCACCCTGGTGGTCAACAACATGCGCGGCATCGTC AAGGTCGCTGCGGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATIAIVAELKQLAKPCTDSKAIAQVGTIS ANSDESIGQIIAEAMERVGKEGVITVEEGSGFENELSVVEGMQFDRGYLSPYFINKPDTM VAELDNPLLLLVDKKISNIRELLPVLEGVAKAGRPLLIVAEDVEGEALATLVVNNMRGIV KVAAV |