RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b12524 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-08-24 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Phenylobacterium |
| Species: | zucineum (plasmid) |
| Strain: | HLK1 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_011143 |
| Peptide Genbank Accession: | YP_002128613 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Sequence is on plasmid (unnamed). Facultative intracellular organism isolated from the human leukemia cell line K562. This is proposed type strain, but name has no standing in nomenclature as of 2008-08-24. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCGAAAGAGATCCACTTCTCCACCGACGCCCGCGACCGCATGCTGCGCGGCGTC AACATCCTGGCAAACGCCGTGCGGGTGACCCTGGGCCCGAAGGGCCGCAACGTGGTTATT GAGAAGTCCTTCGGCGCGCCGCGCACCACCAAGGACGGCGTCAGCGTCGCCAAGGAGATC GAGCTCGAGGACAAGTTCGAGAATCTCGGCGCCCAGCTGCTGCGCGAGGTCGCCTCCAAG ACCAACGACCAGGCCGGCGACGGCACGACCACGGCCACCGTGCTCGCCCAGGCCATCGTC CAGGAAGGCCTGAAGTCGGTGGCGGCCGGCATGAACCCGATGGACCTGAAGCGCGGCGTC GACAAGGCCGTCGCCGCCGTCGTGGAGGAGATCCGCGCCACCTCCAAGAAGGTGTCCTCC AACGAGGAGATCGCCCAAATCGGCACCATCTCGGCCAACGGCGAACGCGAGATCGGCGCC ATGATCGCCCAGGCCATGGAGCGGGTGGGCAACGAGGGGGTGATCACGGTCGAGGAAGCC AGGGGCCTCGAGATGGAACTCGAGGTGGTCGAGGGCATGCAATTCGACCGGGGCTATGTC TCGCCCTACTTCGTCACCAATCCCGACCGGATGGAGACGGTGCTCGAAGACGCCCTGGTT CTGATCTTCGAGAAGAAGCTGACGACCCTGCAGCCGCTCATTCCGCTGCTCGAGCAGGTG GTGCAATCCGGCAAACCGCTCCTGGTCATCGCCGAGGACATCGAAGGCGAGGTGCTGGCC ACCCTCGTCCTCAACAAGCTGCGCGGCGGCCTGCGCGTCGCCGCCGTGAAGGCGCCCGGC TTCGGCGACCGCCGCAAGGCGATGCTAGAGGACATCGCCATCCTGACCGGCGGCCAGTTC ATCAGCGAGGACCTAGGGATCAAGCTGGAGAACGTGACCATCGACCAGCTCGGCCGCGCC AAAAAGGTCATCATCACCAAGGACGACACCACCATTGTCGAAGGCGCCGGCGACAAGGCC GACATCCAGGGCCGTATCGGCCAGATCCGGCGTCAGATCGAGGAGACGACCTCCGACTAC GACCGCGAGAAGCTGCAGGAACGCCTGGCCAAGCTCGCCGGCGGCGTCGCCGTGGTGCGG GTCGGCGGCTCGACCGAGGTGGAGGTCAAGGAGAAGAAGGATCGCGTCGACGACGCCATG CACGCCACGAGGGCGGCTGTCGAGGAGGGGATCGTCCCCGGCGGCGGCGTAGCTCTCCTG CGCGCCAGCAAGGTGCTGGAGGGTTTGAACGGCGCCAACGACGACCAGAACGCCGGCATC GCCATCGTGCGGCGCGCGCTACAGGCGCCGATTCGCCAGATCGCGGAAAACGCCGGCGTC GAGGGGTCCATAGTCGTCGGCAAGATCCTGGAGAACGCCTCGCCGACGTTCGGCTTTAAC GCCCAGACCGAGGAATATGTCGATCTGGTGCAGGCGGGCGTGATCGATCCCGCCAAGGTC GTGCGCACCGCCCTGCAGGACGCGGCCTCCGTGGCCGGACTGCTGATCACGACCGAGGCT GCGGTGGCCGAGGCGCCGAAGAAGCCCGAGGCCGGCGCGAACGCCGCCATGGTGGCTTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEIHFSTDARDRMLRGVNILANAVRVTLGPKGRNVVIEKSFGAPRTTKDGVSVAKEI ELEDKFENLGAQLLREVASKTNDQAGDGTTTATVLAQAIVQEGLKSVAAGMNPMDLKRGV DKAVAAVVEEIRATSKKVSSNEEIAQIGTISANGEREIGAMIAQAMERVGNEGVITVEEA RGLEMELEVVEGMQFDRGYVSPYFVTNPDRMETVLEDALVLIFEKKLTTLQPLIPLLEQV VQSGKPLLVIAEDIEGEVLATLVLNKLRGGLRVAAVKAPGFGDRRKAMLEDIAILTGGQF ISEDLGIKLENVTIDQLGRAKKVIITKDDTTIVEGAGDKADIQGRIGQIRRQIEETTSDY DREKLQERLAKLAGGVAVVRVGGSTEVEVKEKKDRVDDAMHATRAAVEEGIVPGGGVALL RASKVLEGLNGANDDQNAGIAIVRRALQAPIRQIAENAGVEGSIVVGKILENASPTFGFN AQTEEYVDLVQAGVIDPAKVVRTALQDAASVAGLLITTEAAVAEAPKKPEAGANAAMVA |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTCGCCCAGGCCATCGTCCAGGAAGGCCTGAAGTCGGTGGCGGCCGGCATG AACCCGATGGACCTGAAGCGCGGCGTCGACAAGGCCGTCGCCGCCGTCGTGGAGGAGATC CGCGCCACCTCCAAGAAGGTGTCCTCCAACGAGGAGATCGCCCAAATCGGCACCATCTCG GCCAACGGCGAACGCGAGATCGGCGCCATGATCGCCCAGGCCATGGAGCGGGTGGGCAAC GAGGGGGTGATCACGGTCGAGGAAGCCAGGGGCCTCGAGATGGAACTCGAGGTGGTCGAG GGCATGCAATTCGACCGGGGCTATGTCTCGCCCTACTTCGTCACCAATCCCGACCGGATG GAGACGGTGCTCGAAGACGCCCTGGTTCTGATCTTCGAGAAGAAGCTGACGACCCTGCAG CCGCTCATTCCGCTGCTCGAGCAGGTGGTGCAATCCGGCAAACCGCTCCTGGTCATCGCC GAGGACATCGAAGGCGAGGTGCTGGCCACCCTCGTCCTCAACAAGCTGCGCGGCGGCCTG CGCGTCGCCGCCGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVQEGLKSVAAGMNPMDLKRGVDKAVAAVVEEIRATSKKVSSNEEIAQIGTIS ANGEREIGAMIAQAMERVGNEGVITVEEARGLEMELEVVEGMQFDRGYVSPYFVTNPDRM ETVLEDALVLIFEKKLTTLQPLIPLLEQVVQSGKPLLVIAEDIEGEVLATLVLNKLRGGL RVAAV |