RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b14496 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-08-13 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Pectobacterium |
| Species: | wasabiae |
| Strain: | WPP163 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_013421 |
| Peptide Genbank Accession: | YP_003258155 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Pectobacterium wasabiae is a causal agent of soft rot disease of plants, an economically important pathogen of many crops. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGACGTAAAATTCGGTAATGACGCTCGCGTAAAAATGCTACGCGGCGTG AATGTACTGGCTGATGCAGTGAAGGTTACCCTGGGCCCGAAAGGCCGTAACGTAGTTTTG GATAAATCCTTCGGTGCACCGACCATTACTAAAGACGGCGTATCTGTAGCGCGTGAAATC GAACTGGAAGACAAGTTCGAGAACATGGGCGCACAGATGGTGAAAGAAGTTGCCTCTAAA GCGAATGACGCAGCAGGCGACGGCACCACGACCGCAACCGTATTGGCGCAGGCAATCATC ACTGAGGGCCTGAAAGCTGTTGCAGCGGGCATGAACCCGATGGATCTGAAGCGCGGTATC GATAAAGCTGTTATCGCTGCTGTTGAAGAGCTGAAAACACTGTCTGTACCGTGCTCTGAC TCTAAAGCTATCGCTCAGGTTGGTACCATCTCTGCTAACTCCGACGAAACCGTAGGCAAA ATGATTGCCGAAGCCATGGATAAAGTCGGTAAAGAAGGTGTTATCACCGTTGAAGAAGGT ACCGGTCTGCAAGACGAGCTGGACGTGGTTGAAGGTATGCAGTTTGACCGCGGCTACCTG TCTCCGTACTTCATCAACAAGCCAGAAACTGGTGCTGTAGAACTGGAAAGCCCGTTCATC CTGCTGGCTGACAAAAAAATCTCCAACATCCGCGAAATGCTGCCAGTACTGGAAGCCGTA GCGAAAGCGGGCAAACCGCTGGTTATCGTTGCTGAAGATGTTGAAGGCGAAGCGCTGGCA ACGCTGGTGGTTAACACGATGCGTGGCATCGTGAAAGTGGCTGCGGTGAAAGCTCCGGGC TTCGGCGACCGTCGTAAAGCGATGCTGCAAGATATCGCTACGCTGACTGGTGGTACCGTT ATCTCTGAAGAGATCGGTCTGGAACTGGAAAAAGCGACGCTGGAAGATTTGGGTCAGGCA AAACGCGTTGTTATCAACAAAGACACCACCACCATCATCGATGGTACGGGTGAAGAAGCT GCGATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGGTTGAAGAAGCAACCTCAGATTAC GACAAAGAAAAACTGCAAGAGCGTGTGGCTAAACTGGCTGGCGGCGTAGCCGTTATCAAA GTTGGCGCAGCAACTGAAGTTGAAATGAAAGAGAAGAAAGCACGTGTTGAAGATGCCCTG GCTGCGACTCGCGCTGCGGTAGAAGAAGGCGTGGTTGCTGGTGGTGGCGTGGCGCTGGTT CGCGTTGCAGCTAAACTGGCTTCTCTGACTGCTCAGAACGAAGACCAGAACGTGGGTATC AAAGTTGCGCTGCGCGCGATGGAAGCTCCACTGCGTCAGATCGTTTCCAACGCTGGTGAA GAGCCATCTGTGGTTGCGAATACCGTTAAAGCGGGTGAAGGTAACTACGGTTACAACGCG GCAACTGAAGAATACGGCAACATGATCGACTTCGGTATCCTGGATCCGACCAAAGTTACC CGTTCTGCGCTGCAATTCGCGGCTTCCGTTGCTGGTCTGATGATCACCACCGAATGTATG GTCACCGACCTGCCTAAAGGCGATGCGCCTGACTTAGGTGCTGCTGGTGGCATGGGCGGT ATGGGTGGTATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVIAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKMIAEAMDKVGKEGVITVEEG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGTGEEAAIQGRVAQIRQQVEEATSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALAATRAAVEEGVVAGGGVALV RVAAKLASLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANTVKAGEGNYGYNA ATEEYGNMIDFGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG MGGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTATTGGCGCAGGCAATCATCACTGAGGGCCTGAAAGCTGTTGCAGCGGGCATG AACCCGATGGATCTGAAGCGCGGTATCGATAAAGCTGTTATCGCTGCTGTTGAAGAGCTG AAAACACTGTCTGTACCGTGCTCTGACTCTAAAGCTATCGCTCAGGTTGGTACCATCTCT GCTAACTCCGACGAAACCGTAGGCAAAATGATTGCCGAAGCCATGGATAAAGTCGGTAAA GAAGGTGTTATCACCGTTGAAGAAGGTACCGGTCTGCAAGACGAGCTGGACGTGGTTGAA GGTATGCAGTTTGACCGCGGCTACCTGTCTCCGTACTTCATCAACAAGCCAGAAACTGGT GCTGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAAAAAAATCTCCAACATCCGC GAAATGCTGCCAGTACTGGAAGCCGTAGCGAAAGCGGGCAAACCGCTGGTTATCGTTGCT GAAGATGTTGAAGGCGAAGCGCTGGCAACGCTGGTGGTTAACACGATGCGTGGCATCGTG AAAGTGGCTGCGGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKTLSVPCSDSKAIAQVGTIS ANSDETVGKMIAEAMDKVGKEGVITVEEGTGLQDELDVVEGMQFDRGYLSPYFINKPETG AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLVIVAEDVEGEALATLVVNTMRGIV KVAAV |