RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b16824 |
| Chaperonin Group: | I |
| Deposit Date: | 2010-04-19 |
| Type: | cli |
| Type strain?: | no |
| Genus: | Yersinia |
| Species: | pestis |
| Strain: | Z176003 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_014029 |
| Peptide Genbank Accession: | YP_003566524 |
| Best FASTA Match: | b29103 Yersinia pestis subsp. microtus bv. Talassica SCPM-O-B-4664 (see fasta results) |
| Date of FASTA search: | 2024-04-29 |
| FASTA identity %: | 100.000 |
| Best BLASTP Match: | b36051 Yersinia rochesterensis EPLC-04 ATCC BAA-2637 (see blastp results) |
| Date of BLASTP search: | 2024-04-29 |
| BLASTP identity %: | 100.000 |
| Source: | Genbank |
| Notes: | This strain belongs to Antiqua biovar of Yersinia pestis. It was isolated from a dead marmot in Tibet Autonomous Region, China. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGCATTAAAATGCTACGCGGCGTA AACATCCTTGCTGATGCAGTGAAAGTGACTCTGGGCCCTAAAGGCCGTAACGTAGTTCTG GATAAGTCTTTCGGTTCTCCAACGATCACTAAAGACGGTGTTTCTGTTGCACGTGAAATC GAACTGGAAGACAAGTTCGAGAACATGGGCGCACAGATGGTTAAAGAAGTTGCCTCTAAA GCAAATGATGCTGCGGGTGACGGTACCACGACTGCAACAGTATTGGCTCAATCCATCATC ACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATGAACCCAATGGATCTGAAGCGCGGCATC GACAAAGCCGTTATCGCAGCGGTAGAAGAGCTGAAAAAACTGTCTGTACCTTGCTCTGAT TCCAAAGCGATTGCTCAGGTCGGTACCATCTCTGCAAACTCCGACTCAACCGTTGGCGAA CTGATCGCTCAAGCGATGGAAAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGAAGGT TCAGGCCTGCAAGACGAGTTGGACGTTGTAGAAGGTATGCAGTTCGATCGCGGCTACCTG TCTCCTTACTTCATCAATAAACCAGAAACTGGCTCTATTGAACTTGAAAGCCCATTCATT CTGTTGGCTGACAAGAAAATCTCTAACATCCGTGAAATGCTGCCAGTTCTGGAAGCCGTA GCGAAAGCCGGCAAGCCACTGCTGATCATTGCAGAAGACGTTGAAGGCGAAGCCCTGGCG ACTCTGGTAGTGAACACCATGCGCGGTATCGTTAAAGTTGCAGCGGTTAAAGCACCTGGC TTCGGCGACCGTCGTAAAGCGATGCTGCAAGACATCGCGACCCTGACTGCGGGTACTGTT ATCTCTGAAGAGATCGGTCTGGAACTGGAAAAAACTACTCTGGAAGATCTGGGTCAGGCG AAACGTGTTGTTATCAACAAAGACACCACCATCATTATTGATGGCGTAGGCGATGAAGCG GCAATCCAAGGCCGTGTGGCTCAGATTCGTCAGCAGATTGAAGATGCCACTTCTGACTAC GACAAAGAAAAACTGCAAGAGCGTGTTGCTAAACTGGCTGGCGGCGTTGCCGTTATCAAA GTGGGCGCCGCAACTGAAGTTGAAATGAAAGAGAAGAAAGCACGCGTTGAAGATGCTCTG CATGCAACTCGTGCCGCAGTAGAAGAAGGCGTCGTAGCGGGTGGTGGTGTTGCACTGATT CGTGCAGCTCACGCTATCGCTGGCCTGAAAGGCGATAACGAAGACCAGAACGTGGGTATT AAAGTGGCTCTGCGTGCGATGGAATCTCCACTGCGTCAGATCGTGGTTAACGCGGGTGAA GAAGCCTCTGTTATCGCGAACAAAGTTAAAGCGGGTGAAGGTAGCTTCGGTTACAACGCT TATACTGAAGAATACGGCGACATGATCGCGATGGGTATCTTGGATCCAACTAAAGTGACG CGTTCTGCTCTGCAGTACGCAGCCTCTATTGCTGGTCTGATGATTACCACCGAGTGCATG GTTACTGACCTGCCACGTGATGACAAAGGTGCTGATATGGGCGCTGGCGGCATGGGTGGT ATGGGTGGTATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARIKMLRGVNILADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDSTVGELIAQAMEKVGKEGVITVEEG SGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV ISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEAAIQGRVAQIRQQIEDATSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RAAHAIAGLKGDNEDQNVGIKVALRAMESPLRQIVVNAGEEASVIANKVKAGEGSFGYNA YTEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMVTDLPRDDKGADMGAGGMGG MGGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT AAAGTTGCAGCGGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKKLSVPCSDSKAIAQVGTIS ANSDSTVGELIAQAMEKVGKEGVITVEEGSGLQDELDVVEGMQFDRGYLSPYFINKPETG SIELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |